Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00306 ATGCAAACAAGGGAAGCTTCAAGCCTCAATTACTTACTCCCTTCAAACCCATGTCCCTACCCTCCAAACAACTACACCATGATGCAAAACAACATTCCTACATTTCAATTCCAAAGATTCTCAAACCAATTATATGGCTACAACAACAACAACCACAGCACTGTTCATCAAGTTCATGACTTCAGTCCTCAATCATCATGCATCAGCAGCAATTCCACTTCTGATGAGGCAGATGAGCAACAACTGAGCCTAATCAACGAGAGGAAGCATAGGAGGATGATATCAAACCGAGAATCAGCTCGTAGGTCAAGGATGAGGAAGCAGAAACACCTTGATGAGCTTTGGTCTCAAGTGGTGTGGCTCAGGAATGAGAACCACCAACTCATGGACAAACTCAACCATGTCTCGGAGAGCCATGACCAAGTGCTCCAAGAGAATGTTCAATTGAAAGAGGAAGCCTCAGAACTTCGCCAAATGATTAGGGACATGCAGATACACAGCCCTTGCCCCTCCTTCCCCCCTTTGGAAGATGATGTCCCTTGCACCTCAGCATATCTCAGATCTGATTCTTCAAACCAATCCAACTCATGTAACAACATGGACCTCCTTGGCTGA 615 0.452 MQTREASSLNYLLPSNPCPYPPNNYTMMQNNIPTFQFQRFSNQLYGYNNNNHSTVHQVHDFSPQSSCISSNSTSDEADEQQLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDQVLQENVQLKEEASELRQMIRDMQIHSPCPSFPPLEDDVPCTSAYLRSDSSNQSNSCNNMDLLG 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00306 204 Coils Coil 132 166 - -
Pste9g00306 204 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Pste9g00306 204 Pfam bZIP transcription factor 88 146 IPR004827 GO:0003700|GO:0006355
Pste9g00306 204 CDD bZIP_plant_GBF1 89 140 IPR045314 GO:0003700|GO:0006355
Pste9g00306 204 Gene3D - 86 141 - -
Pste9g00306 204 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Pste9g00306 204 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 149 IPR004827 GO:0003700|GO:0006355
Pste9g00306 204 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 170 IPR044521 -
Pste9g00306 204 SUPERFAMILY Leucine zipper domain 88 138 IPR046347 GO:0003700|GO:0006355
Pste9g00306 204 FunFam BZIP transcription factor 86 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00306 Pste-Chr9 1439517 1440131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00306 63 179 bZIP Transcription Factor Family AT3G30530 72.500 8.45e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste9g00306 bZIP_1 1.8e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g00306 9 1439517 1440131 Pste5g00516 5 3402478 3403071 PCT