Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00274 TTTCAATGAGTAACTCACAACACTTGAATAACAGTGGTTGTGGCTTTTTTCCTGACATGAACAATTTCCCTGCACCACCTGTTCCTTCTCCTTCTGTTCTTGGTCTCCAGAGTTCAAACACTGTTAATGTGATGGGAGGCACAGAATCTGAAAGTTCTGATATACCCTTTCAGATTTTGAACTCCTCAATGCCTCAACCCCATGTGGAGAATGAAGACTCTCTTGGGGTTGAGAACATGAGTTTGTCTTTGAAACCTGGTGAGGAAGTTGAAGGTAACAGTTCTTCTGGCACAGAGAAAGTTAAGCACACTAAGCTTTGTGCTAGAGGCCATTGGAGGCCAGCTGAAGATGCCAAACTTAAAGAGCTTGTTGCCCAATTTGGTCCTCAAAATTGGAACTCCATTGCTGAGCATCTTCAAGGAAGATCAGGGAAGAGTTGTAGATTGAGGTGGTTTAATCAGCTAGATCCCAGAATCAACAGAAATGCTTTCACTGAGGAAGAGGAAGAGAGGCTCTTGGCTGCTCACAGAGTGTATGGTAACAAATGGGCCATGATTTCTAGACTCTTCCCTGGTAGGACTGATAATGCTGTGAAGAACCATTGGCATGTGATCATGGCTAGGAGGCACAGGGAGAAGTCATGCATCTTTAGAAGGAGAAAGCTCTCATTTCAAACCCTTCCAAAGAATGCAGCCAGTGATTCAACCATCTCAAGCATCATCATTGATGAACCTGCAGCCTCCACAGGCACCACCAACCTTTCCCTCACTCCCTCCTCAGCCAATCCAACAACTCCTATGCCTTTTCACACTCCTTTTCAAATGGGTTTATCTGGAGGAAGCAGGGATGTGGGTTTCGACAAGTTTTTTGGTGCTAATGGGAAAGGTTCATGCTATGCTGGACCCATGGGAAGGCTAATGGGTGTGGACCAATCCCATAACTCAGATTCAAATTCATCAGAAGTTTCAGTATCTGAGTCAGTTGCCACCTACAGGGCTACCAATCTCTCAATTTCTGGGGAAAGTGAAAACATGGGTGACAACAAGGCCAATGTGTCATTCATTGACTTTCTTGGAGTAGGAGCTACA 1088 0.4485 MSNSQHLNNSGCGFFPDMNNFPAPPVPSPSVLGLQSSNTVNVMGGTESESSDIPFQILNSSMPQPHVENEDSLGVENMSLSLKPGEEVEGNSSSGTEKVKHTKLCARGHWRPAEDAKLKELVAQFGPQNWNSIAEHLQGRSGKSCRLRWFNQLDPRINRNAFTEEEEERLLAAHRVYGNKWAMISRLFPGRTDNAVKNHWHVIMARRHREKSCIFRRRKLSFQTLPKNAASDSTISSIIIDEPAASTGTTNLSLTPSSANPTTPMPFHTPFQMGLSGGSRDVGFDKFFGANGKGSCYAGPMGRLMGVDQSHNSDSNSSEVSVSESVATYRATNLSISGESENMGDNKANVSFIDFLGVGAT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00274 361 PANTHER MYB PROTEIN-RELATED 107 309 - -
Pste9g00274 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 153 IPR017930 -
Pste9g00274 361 CDD SANT 170 201 IPR001005 -
Pste9g00274 361 FunFam MYB transcription factor 107 158 - -
Pste9g00274 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 208 IPR017930 -
Pste9g00274 361 FunFam MYB transcription factor 160 231 - -
Pste9g00274 361 Pfam Myb-like DNA-binding domain 110 170 - -
Pste9g00274 361 Gene3D - 160 223 - -
Pste9g00274 361 SMART sant 106 155 IPR001005 -
Pste9g00274 361 SMART sant 158 206 IPR001005 -
Pste9g00274 361 ProSiteProfiles Myb-like domain profile. 154 204 IPR001005 -
Pste9g00274 361 ProSiteProfiles Myb-like domain profile. 107 153 IPR001005 -
Pste9g00274 361 SUPERFAMILY Homeodomain-like 107 200 IPR009057 -
Pste9g00274 361 CDD SANT 110 151 IPR001005 -
Pste9g00274 361 Gene3D - 107 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00274 Pste-Chr9 1262842 1264461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00274 77 361 MYB Transcription Factor Family AT5G17800 46.906 1.36e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g00274 Myb_DNA-bind_6 1.5e-15 CL0123