Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00271 CTAGGAACTCTCTTGGGTCCGATTACCCTTTTCTCTTCAAGTCACTAAGATCATGGCGAGCATTTCAAGCATTCCAACACACATGAAAGGTTGGGTTTATGCTGAATATGGGAACATAGTTGAAAATCTCAACTTTGAATCTTACATAGCTATACCAGATATCAAGGAAGACCAAGTGCTCATCAAAGTTGTTGCTGCAGCCCTTAATCCTGCAGATTGTATGAGGGCTGTTGGGTATATGAAGAACACTGACGCTCCCTTACCTATTGTTCCAGGGTTTGATGTTGCTGGTGTGGTGGTAAAAGTGGGAACTCAAGTGAGGAAATTCAAGGTTGGAGATGAAGTTTATGGTGATATCGTTGAGTATGCTCTGAATAATCCAAAGTCCATTGGAACATTGGCAGAATATACTGCTACTGAAGAGAAAGTATTGGCTCATAAACCCTCAAATTTGAGCTTTATTGAAGCTGCAAGCCTTCCTGGAGCCATCATAACTGCTTATCAAACACTTGAACATATTGAGTTTTCCGCTGGAAAATCTATACTTGTTCTTGGAGGAGCTGGTGGAGTTGGAACTCTTGTCATTCAGCTCGCCAAGCACGTTTTTGGCGCATCAAAGGTTGCAGCCACTGCTAGTACTGCAAAACTGGATTTGTTGAGGAACTTAGGAGCAGACTTGGCTATTGATTATACAAAGGAGAATTTTGAAGAACTTGCAGAAAAGTTTGATGTAGTGTTCGATACAGTAGGAGAATCTAACAAGGCATTGAAGGGTATTAAAGAAGGCGGCAAAGTTGTGACGATAGTACCACCTTCAACTCCACCGGTTATCCCCTTCTTTGCCATTTCAGATGCTGCTGTGTTGGAGAAATTACATTCTTACTTAGAGAATGGGAAGGTGAAGCCAGTATTGGATCCTAAGAGTCCCTTTCCATTTTCGCAGACTGTGGAAGCATTTGCATACTTGAAGACTAATAGAGCCATTGGGAAACTTGTCATTCATCCCATCCCATAA 1015 0.4187 MASISSIPTHMKGWVYAEYGNIVENLNFESYIAIPDIKEDQVLIKVVAAALNPADCMRAVGYMKNTDAPLPIVPGFDVAGVVVKVGTQVRKFKVGDEVYGDIVEYALNNPKSIGTLAEYTATEEKVLAHKPSNLSFIEAASLPGAIITAYQTLEHIEFSAGKSILVLGGAGGVGTLVIQLAKHVFGASKVAATASTAKLDLLRNLGADLAIDYTKENFEELAEKFDVVFDTVGESNKALKGIKEGGKVVTIVPPSTPPVIPFFAISDAAVLEKLHSYLENGKVKPVLDPKSPFPFSQTVEAFAYLKTNRAIGKLVIHPIP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00271 320 Gene3D - 18 316 - -
Pste9g00271 320 SMART PKS_ER_names_mod 21 316 IPR020843 GO:0016491
Pste9g00271 320 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 320 IPR044626 GO:0016628
Pste9g00271 320 CDD MDR_like_2 11 316 - -
Pste9g00271 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 260 IPR036291 -
Pste9g00271 320 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
Pste9g00271 320 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Pste9g00271 320 Gene3D - 153 267 - -
Pste9g00271 320 Pfam Zinc-binding dehydrogenase 205 316 - -
Pste9g00271 320 SUPERFAMILY GroES-like 7 168 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00271 Pste-Chr9 1256037 1258019 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00271 71 262 Monolignol Biosynthesis Gene Families AT4G37990 26.667 1.27e-07 50.8