Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00237 CATGGAAAACGTCCTGGAACGATATGAGAGACATACCCATATAGGGCAACTTGTTGGAGATGGTGATGATTCACAGGGGAACTGGTCCTTACAATGCTTCAAACTCACCGGCAAAGTTGAAGTCTTAGAGAGGAACTTAAGGAATTTCGCGGGACAAGATCTGGATCCCTTGAATTTGAGAGAGCTTCAGAGTTTGGAACATCAGCTTGACACAGCTATAAAGCGCATCCGAACTAGAAAGGCAAAGCTATTGCAAGAGCAAAATGGCATACTTACAAAAAAGATTAAGGAGAAAGGGAAAGCTGTGGCTGAACCTCCACAGTGCGAGCCAGAAGAAACATTAGGTCTGACATGCCCTCCAGAGCTACAACTACAACAAAGACTAGTTCCTTCTTTAACACTCGGTGAGACTTTACAAGCAACGACGCACAGGGAAATGGTTGAAGCACGCACAGTTCCTAGTGCCAACACTCTCATCCCACCATGGATGCTGCATCATTTTGCAAGA 508 0.4528 MENVLERYERHTHIGQLVGDGDDSQGNWSLQCFKLTGKVEVLERNLRNFAGQDLDPLNLRELQSLEHQLDTAIKRIRTRKAKLLQEQNGILTKKIKEKGKAVAEPPQCEPEETLGLTCPPELQLQQRLVPSLTLGETLQATTHREMVEARTVPSANTLIPPWMLHHFAR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00237 169 ProSiteProfiles K-box domain profile. 25 114 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pste9g00237 169 Coils Coil 62 82 - -
Pste9g00237 169 Pfam K-box region 22 97 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00237 Pste-Chr9 1011737 1017434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00237 1 164 MADS-box Gene Family AT5G60910 38.710 1.22e-30 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00587 5 3774892 3785806 Pste9g00237 9 1011737 1017434 PCT