Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00235 ATGGCTCGTTCCATCCCTCCAAGCTTGCTTTGTGCTATTATGATTATTGCATGTTTCAATTCATCCCTTAGTTTTGCTAAGCAATCCAAGATAAATGGCTTGAAAATGAATGTTATTGATCGATGTTGGAGACCAAATCCTAAGTGGAGAACACATCGGTCCCAATTGGCAACATGTTCTGTGGGTTATGTTGGTAAGATGACAAACAACATTGGTAAAGATCTTATTCATTATACAGTTACTGACCCTAGTGATGATCCTATAAACCCTAAACTCGAACTTTGA 285 0.3789 MARSIPPSLLCAIMIIACFNSSLSFAKQSKINGLKMNVIDRCWRPNPKWRTHRSQLATCSVGYVGKMTNNIGKDLIHYTVTDPSDDPINPKLEL 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00235 94 PANTHER PECTATE LYASE 18-RELATED 33 91 IPR045032 GO:0030570
Pste9g00235 94 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pste9g00235 94 Gene3D - 36 93 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00235 Pste-Chr9 1001537 1001821 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00235 14 91 Polysaccharide Lyase AT1G11920 43.210 2.89e-12 58.9