Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00205 TCTTCTTCCTCCTCTTTCATTCCTCGTTTTCACTTTTTCCTCCCAGTTTTTGAAGCGCGCTGTGAGGCTCTGCGACTTAAACCAGAAGCTGAATCCGAGTTTCAACCTTAGAGAGAGAGAAACACGCTCCTAGCTCGCAGAATCTACGGCCACTTCTCGTTCTTCAATCGAATTGTATTGCCGGTGTCCTTGCTATGGCTGCCACAGCAACTGCCTCTTCGATGGGTCCGCGGTATGCTCCACCAGATCCGACACTACCTAAACCGTGGCGGGGTCTTGTAGATGGCAAGACTGGGTATCTTTACTTTTGGAATCCTGAGACTAATGTCACCCAGTATGAGAGGCCCTCGGGCTCAGCTGCCCTGCCAAAGTCTTCTTCAGTGCCTAGCTCTTCTGTCCAGGTTCAACAATCGGCTCAAGGTTTGCAACGTGGTCGAAGTCCTGATTTCAGTGATAGGTATGATAGAAATGGCAGTAGTGGGTCCAATGAAGCTGGATTGCGGAATAATCAGAGTTCCAAAGGTGGAAGTTATGGTTCTCATGACATGCCAAATGGAACAAATGCTGCTGGGAATGTTAATTCTTCTGTCAGAAGTCATGGGTCTTCAGAGGCTGGAGCAGGACTATCTCCAGAGTCTTATCGACATCGGCATGAAATAACTGTGACTGGAGATAACGTACCTCCACCCCTTTCATCATTTGGGTCTACTGGCTTTCCATCGGAGATTCTGAGAGAGGTACAAAATGCTGGTTTCTCAGCCCCAACTCCAATTCAGGCACAGTCATGGCCCATTGCTCTTCAAAGTAGAGATATAGTTGCCATTGCTAAAACAGGCTCAGGGAAAACCTTGGGCTATTTAATTCCGGCATTTATTCATCTCAAGCGCTGTGGTAATAACTCCAAAATGGGCCCCACGGCATTGGTACTTTCACCAACAAGGGAGCTGGCAACACAGATACAAGATGAAGCTGTGAAGTTTGGGAAATCATCGAGAATTGCTTGTGCATGTTTGTATGGAGGAGCACCAAAGGGTCCTCAACTGAGAGACATTGACAGGGGAGCAGATATTGTTGTAGCCACTCCTGGTCGCTTGAACGATATTCTTGAGATGAGAAGAATTAGTCTTCATCAGGTCTCTTACCTGGTGCTAGATGAGGCAGACAGGATGCTCGATATGGGTTTTGAACCTCAAATCAGGAAAATTGTGAATGAGGTGCCTAATCGCAGGCAAACTCTAATGTTTACCGCAACATGGCCAAAGGAGGTTAGGAAAATTGCGGCTGATTTGCTAGTCAAGCCTGTCCAGGTGAACATTGGCAATGTAGATGAGCTTGTTGCTAACAAGTCCATTACTCAGCATGTAGAAGTATTGTCATCAATGGATAAACAGAGACGGCTGGAACATATTTTGCGGTCACAGGATCAAGGATCAAAGATAATTATTTTTTGTTCAACCAAGAAAATGTGTGATCAGCTTGCTCGAAATCTTACACGTCAATTTGGAGCCGCTGCTATTCATGGTGATAAATCTCAGGCTGAAAGGGATCATGTATTGAATCAGTTTCGAACTGGAAGGTCTCCTGTGCTAGTAGCAACAGATGTTGCCGCCCGTGGATTGGATATAAAAGACATTAGGGTGGTTGTAAACTATGACTTCCCTACAGGAGTTGAAGATTATGTTCATAGGATTGGAAGGACTGGGAGAGCTGGAGCCACTGGGTTAGCTTACACTTTCTTTGGTGACCAGGATGCTAAATATGCTTCGGATCTCATCAAAGTTTTGGAAGGTGCTAACCAGAAGGTACCTCCAGAACTTCGTGATATGTCATCAAGGGGTGGTGGTGGGATGGGAAGATCCAGAAGATGGGGTTCTTCTGGTGGAAGAGGTGGACGTGGTGATTCTGGGTATGGTGGAAGGAATAATGACTCAGGATATGGTGGAAGGGGTAACGAAGCAGGTTATGGTGGAAGAGGTAATGATTCAAATTATGGAGGGAGGGGGACTGCTTCATCTGGCAGAGGTGGAGGCCGTGGGTTTGACTATGACTCTCAGAGGTTAGTTTTGTTTATTAGTAGTGATATTTTGGTAAAGTATTATCCTTATATGCAATACCCGGTTTTGTTGAAGGTTTCTTGTACATGTTTTGGTGTAATTGTTACAATTTACAAATGTGTTGCTGTGTGGCATAGGAATGATCGGGGTCGGAGCCCAGACAAGGGATCTAATTGGAGCGATCGCTTCAAAGGCAGCAACCGAGAACGTGAACGCAGCCGTAGTCGTAGTCCTGAAAGGGCTGCACCAGCTCAGTATTCCCAAGGCAGCTTTCACAAAGCAATGATGGAACGCGGTGGTGGATGGGATAGTGACCGCAATAAGAGCTTTAACCGCAGTCCTAGTCCTCATAGACAAGAGAGGGCCCCGGCATTTCGCGAACGTTCCCCAGTTAACAGTTTTCATCGATCAATGATGGGACAGGGTCAATCATCCCCTTCATCTCAACGCAAAGAAGAAAAAGGTTCGAGATACCGAAACTCACCCTCCTCCCAGGGTGATGGAAAATATGGTGGAGGATCAGAAGTGGAGGAAGGGATGATTCCCGAGGAAGAAGGAATATGATCCGGTGCGGATTAGGATTTTGGCCATCCTGACCATTATTTACATATAAATATATGCTGATGTTGTTTGGACTGCTTACATTGTTGCTTCAAGACGGGCAATTTAGGATCTGGTAGTGGAATTCATGGCAAATGTATATTTTGAGGGGCTTTGTTGAAGCCTGGAAATCGCATAGATGAACATGAACCGAACCTAGTAACGAATATTGTGGTTTTTTGTTATTTTGCTAAACTCGACTTCATATAGAGCCGTGTTCTTTGTTCCCACACAATCAGAACAGAAATTATCCACTTACTATAATTAAATTAAAATGTTGTATTCCTCTACTTTTATCACATTCATTCTTTGATCTTGTAATTTTTCTAGTTGGATCATTCATCAAAGATACTTAATTATCTGTACAAACTGGAAACTAATGCTTGTGGAACATGTTGCAAGCACACCAATTGGAGCTTTTCTGTTGTATTTTAATGTGT 3094 0.4463 MAATATASSMGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSGSAALPKSSSVPSSSVQVQQSAQGLQRGRSPDFSDRYDRNGSSGSNEAGLRNNQSSKGGSYGSHDMPNGTNAAGNVNSSVRSHGSSEAGAGLSPESYRHRHEITVTGDNVPPPLSSFGSTGFPSEILREVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFIHLKRCGNNSKMGPTALVLSPTRELATQIQDEAVKFGKSSRIACACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRKIAADLLVKPVQVNIGNVDELVANKSITQHVEVLSSMDKQRRLEHILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGANQKVPPELRDMSSRGGGGMGRSRRWGSSGGRGGRGDSGYGGRNNDSGYGGRGNEAGYGGRGNDSNYGGRGTASSGRGGGRGFDYDSQRLVLFISSDILVKYYPYMQYPVLLKVSCTCFGVIVTIYKCVAVWHRNDRGRSPDKGSNWSDRFKGSNRERERSRSRSPERAAPAQYSQGSFHKAMMERGGGWDSDRNKSFNRSPSPHRQERAPAFRERSPVNSFHRSMMGQGQSSPSSQRKEEKGSRYRNSPSSQGDGKYGGGSEVEEGMIPEEEGI 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00205 807 ProSitePatterns WW/rsp5/WWP domain signature. 25 51 IPR001202 GO:0005515
Pste9g00205 807 MobiDBLite consensus disorder prediction 46 80 - -
Pste9g00205 807 SMART ultradead3 186 389 IPR014001 -
Pste9g00205 807 MobiDBLite consensus disorder prediction 718 745 - -
Pste9g00205 807 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 318 326 IPR000629 -
Pste9g00205 807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 523 IPR027417 -
Pste9g00205 807 Pfam DEAD/DEAH box helicase 191 361 IPR011545 GO:0003676|GO:0005524
Pste9g00205 807 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 198 372 IPR014001 -
Pste9g00205 807 Gene3D - 17 65 - -
Pste9g00205 807 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 167 195 IPR014014 GO:0003724
Pste9g00205 807 SUPERFAMILY WW domain 12 52 IPR036020 GO:0005515
Pste9g00205 807 SMART helicmild6 426 506 IPR001650 -
Pste9g00205 807 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 401 545 IPR001650 -
Pste9g00205 807 ProSiteProfiles WW/rsp5/WWP domain profile. 19 53 IPR001202 GO:0005515
Pste9g00205 807 MobiDBLite consensus disorder prediction 46 147 - -
Pste9g00205 807 CDD SF2_C_DEAD 386 515 - -
Pste9g00205 807 CDD WW 22 51 IPR001202 GO:0005515
Pste9g00205 807 SMART ww_5 20 53 IPR001202 GO:0005515
Pste9g00205 807 FunFam ATP-dependent RNA helicase RhlB 376 548 - -
Pste9g00205 807 MobiDBLite consensus disorder prediction 1 27 - -
Pste9g00205 807 Gene3D - 377 547 IPR027417 -
Pste9g00205 807 MobiDBLite consensus disorder prediction 670 807 - -
Pste9g00205 807 Gene3D - 145 376 IPR027417 -
Pste9g00205 807 FunFam probable ATP-dependent RNA helicase DDX17 142 375 - -
Pste9g00205 807 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 128 545 - -
Pste9g00205 807 MobiDBLite consensus disorder prediction 537 612 - -
Pste9g00205 807 MobiDBLite consensus disorder prediction 670 698 - -
Pste9g00205 807 Pfam Helicase conserved C-terminal domain 398 506 IPR001650 -
Pste9g00205 807 MobiDBLite consensus disorder prediction 89 138 - -
Pste9g00205 807 MobiDBLite consensus disorder prediction 754 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00205 Pste-Chr9 836598 843333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00205 165 544 Eukaryotic Initiation Factors Gene Family AT3G19760 33.681 9.23e-67 226