Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00189 GTTGCATTCATCGAGAACAAATATCCTTCATGATGGCTTTTCTCATCCCTCCTCCCTATTTGCTTTGTGCTATCATCATTGTTGTCTTCTTCAATTCAAACCTTAGTTTTGCAAAACAATCTAAGATATTTGGCTTGAAAATGAATGTTATTGATCGATGTTGGAGACCAAATCCTGAATGGAGGACATATAGGTCTCAATTGGCCACATGTTCTGTGGGATATGTTGGCAAGATGACAAACAACATTGGTAAAGACCTTATTCATTATATAGTTACTGACCCTAGTGATGATCCTGTAAACCCTAAAATTGGCACCTTAAGGTATGGTGCTTCTGTGATTCAAGGTAAAGTGTGGATCACATTCCAAAAAGATATGTACATTAAACTAGAGAAATCCCTTCTCATTAGTAGTTTCACTGCCATTGATGGTCGAGCCCCTGGGTTCGTGATGGGGCCTGAAGGAAAGGTAATTCCTTTAGGACAAGTGGATGGAGATGCAATTAGATTGATTACTGCTTCAAAGATTTGGATTGATCATAATACTCTTTATAATTGCCAAGATGGTCTACTTGATATTACACGAGGTTCCACAAATGTAACTATCTCCAATAATTGGTTTAGAAATCAAGACAAGGTTATGCTTCTTGGGCATGATGATGGATATGTAAGAGACCAAAACATGAAAGTTACTGTTGTATACAACCATTTTGGACCTAATTGCAATCAACGCATGCCAAGGATTCGACATGGATATGCACATGTAGCCAACAATCTTTACCAGGGATGGTTGCAATATGCCATTGGTGGAAGCATGAAACCTAGTCTTAAAAGTGAAGCTAACCTTTTCATAGCACCAAGAACAGGTAGTAAGGAGGTAACATGGAGAAAGAGCACCGATAAAAATGGGGATAGATGGGAATTTCATTCAGTAGGAGATATTTTTGAAAATGGAGCTTCATTTGCAGTAACAACAGGAGGA 980 0.3837 MMAFLIPPPYLLCAIIIVVFFNSNLSFAKQSKIFGLKMNVIDRCWRPNPEWRTYRSQLATCSVGYVGKMTNNIGKDLIHYIVTDPSDDPVNPKIGTLRYGASVIQGKVWITFQKDMYIKLEKSLLISSFTAIDGRAPGFVMGPEGKVIPLGQVDGDAIRLITASKIWIDHNTLYNCQDGLLDITRGSTNVTISNNWFRNQDKVMLLGHDDGYVRDQNMKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWLQYAIGGSMKPSLKSEANLFIAPRTGSKEVTWRKSTDKNGDRWEFHSVGDIFENGASFAVTTGG 317
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00189 317 Gene3D - 38 317 IPR012334 -
Pste9g00189 317 PANTHER PECTATE LYASE 18-RELATED 139 312 IPR045032 GO:0030570
Pste9g00189 317 Pfam Pectate lyase 151 273 IPR002022 -
Pste9g00189 317 SUPERFAMILY Pectin lyase-like 38 311 IPR011050 -
Pste9g00189 317 SMART amb_all 77 279 IPR002022 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste9g00189 Pste-Chr9 760267 761788 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00189 69 283 Polysaccharide Lyase AT5G09280 64.919 1.40e-119 344