Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00185 CTAGAACCCCAAGAGAATTCCCTGGAAGGTTCTTCTACAATTTTATACATTCTATGTCATAGCATTTTTCCACTAAGCAACTCTTGATCTTAAAAACCTTTGTGACTGAAGCTGTCTTGGAGCCTATTGTAGTAGTTGATAACATAAAAAAATTAGACTATGAGGCTTCTCATCTCGGCTCTTTGTGTTCTTGTGTTATTCTCTTATGCAGTTGCTTATGATCCTTTGGATCCAAACGGAAACGCTGTGGTAACAATTCACAATTTCCAAATGTTTCGGCACATTATGAATCCTGGATGGACCTTGGGATGGACATGGGCTAAGAAAGAAGTGATTTGGTCTATGGTAGGAGCTCAAACCACAGAACAAGGAGATTGTTCTAAGTTCAAAGGCAATATACCCCATTGCTGCAAGAAAATTCCCACAGTTGTAGACCTGCTCCCTGGTGTTCCTTACAACCAGCAATTCTCAAACTGCTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGATCCTTCTCAAGCTATCTCATCCTTCCAAATCAGTTTAAACTCCCCAAGAATTACACCCTCTTGGCTCCAGGACCAGGCTACACTTGTGGCCCTGCAAAGTTTCTGGCAAGAAAGAACCCAAGTTGTTGTGTATCTTTGTCATCCTTCTACAATGAAACAATTACCCCTTGTACCTCTTGTGCTTGTGGCTGCCAGAACAAGAAGAATTGTGAGTGACTCCAAAATTCTCAGCATGGTGGGTGTTCACACTCCAAAGAAAGACCATGAACCATTGCTGCAGTGCACTCATCACATGTGTCCAATCAGGGTCCACTGGCATGTGAAGCAAAACTACAAGGACTATTGGCGAGTCAAGATCGCTATAACAAACTTCAATTATAGGATGAATCACTCCCTCTGGTCTCTTGCTGTTCAGCATCCAAATCTTAACAATCTCACACAAGTTTTCAGTTTTAATTACAAGCCTCTTCTTCCCTATGCATCCATAAATGACACCGGCATGTTCTATGGCATGAAATACTTCAATGATCTTCTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAGTTGCTTCTTCAGAAGGACAAGGATACATTCACATTCAAGCAGGGTTGGGCATTTCCTCGTAAGGTCTACTTTAATGGTGATGAATGCATGCTGCCCCCACCTGACTCCTATCCGTTTCTCCCTAACTCTGCACCTGCAAGCCTACTTACCTTCCCAGCATTCATTTTCTTATTGCTTTTCTTGCTAGCAGTT 1275 0.4282 MRLLISALCVLVLFSYAVAYDPLDPNGNAVVTIHNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSQAISSFQISLNSPRITPSWLQDQATLVALQSFWQERTQVVVYLCHPSTMKQLPLVPLVLVAARTRRIVSDSKILSMVGVHTPKKDHEPLLQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNHSLWSLAVQHPNLNNLTQVFSFNYKPLLPYASINDTGMFYGMKYFNDLLMEAGPTGNVQSELLLQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSAPASLLTFPAFIFLLLFLLAV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00185 372 PANTHER PROTEIN COBRA 188 365 IPR006918 GO:0010215|GO:0016020
Pste9g00185 372 PIRSF COBRA 1 141 IPR006918 GO:0010215|GO:0016020
Pste9g00185 372 PIRSF COBRA 180 372 IPR006918 GO:0010215|GO:0016020
Pste9g00185 372 Pfam COBRA-like protein 29 167 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00185 Pste-Chr9 735143 737813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00185 1 369 COBRA Gene Family AT3G29810 51.716 4.94e-147 421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g00185 9 735143 737813 Pste5g00610 5 3958030 3979459 PCT
Pste5g00609 5 3949184 3951713 Pste9g00185 9 735143 737813 PCT