Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00183 ATGCTTTTCCCTCGAAGCTTCAACCCGACGATCCGATCCTTCATCAAACCCCCTTCATGCATTCTGCTTTTGGTTCTGTTCTGCTGCACGTGCTTCACTACAACAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACAGCTGATGGTTATGTTGCTGTTGTTACAATGAACAACTTCCAACAATATCGCCATATCTCATCGCCTGGGTGGTTGCTGGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGGTGGGAGGGCAAACCACTGAACAAGGAGATTGTTCAAAATATAAGGGAAACATCCCTCATTGCTGTAAAAAGGACCCAATTGTTGTAGATTTACTTCCTGGAACACCTTACAATCAACAAATTGCAAACTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAGGATCAATCCAAGGCAGTTTCAGCATTTCAAGTCAGTGTAGGTAGTGCCGGTACAACTAACAGAACTGTCAAACTGCCAAAAAACTTCACATTGAAAGCACCAGGACCCGGTTATACATGTGGGCCAGCAAAAATTGTGAGACCTACTAAATTCATAACATCAGACAAAAGGAGAGTGACCCAAGCACTTATGACATGGAACGTGACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCACTTGCTGTGTGTCGCTTTCATCTTTCTATAACTCTACTGTTGTACCCTGTCCTACATGTTCATGTGGCTGCCAAGGCAATTCATCTCTATCAGGGGAATGTGTAGATCCAGATTCACCACATTTGCAATCAGTTGTTTCCAACCCTGTACCGGGAAAGAATAGTATTACACCTTTGGTTCGATGTACTCGTCATATGTGTCCAATCCGAGTTCACTGGCATGTTAAACTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTGTTACTAATTTCAATTACAGGATGAACTATTCTGACTGGAACTTGGTCATTCAACATCCAAACTTTGACAATCTGACCCAACTTTTCAGTTTCAACTACCAATCAATAAATCCCTATGGGCCAATAAATGATACAGCAATGCTTTGGGGAGTTAAGTTCTACAACGATTTTCTCATGCAAGCTGGCCCTCTTGGTAATGTACAGTCAGAGCTACTATTCAAAAAGGACAAAACAACTTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGTGACGTTTGTGTGATGCCACAACCTGATGCTTATCCTTGGTTACCTAATACTGGTTCCAAGCAAGAGGTTTCCCTGCTTGCTTTGGTGATGACCTCCTTGTTAGCCTTGGTATTATTATATGCATATGCTTAAAGTTCTTACATGCCACACTCATCAAAGTCTTCAGTATGACAAGTTTTGACTCAATTTTGGGATACAAGTTTGGAATTTGAACCAAGCCGGGGTAGGACATCCAGTGTCAATTCGAGAGTAGCTCAGTTGTCCTATGATTTGCTTCCAAGTTTCAGCATATGGGGCGATTGAATTTGCTACTATATTGTTATTTATGTCTGTTATAATGTAGTGTATTTTTGGTTCTAGATCCGTAGTCAGTTGGTATTGTAAGTATAAGAAATATTTAAAGGTCCACAGTTAATGAAATAATTCATAAACGCTTCTCAT 1689 0.4127 MLFPRSFNPTIRSFIKPPSCILLLVLFCCTCFTTTEAYDPLDPNGNITIKWDIISWTADGYVAVVTMNNFQQYRHISSPGWLLGWTWAKKEVIWSMVGGQTTEQGDCSKYKGNIPHCCKKDPIVVDLLPGTPYNQQIANCCKGGVLSSWAQDQSKAVSAFQVSVGSAGTTNRTVKLPKNFTLKAPGPGYTCGPAKIVRPTKFITSDKRRVTQALMTWNVTCTYSQFLAQRTPTCCVSLSSFYNSTVVPCPTCSCGCQGNSSLSGECVDPDSPHLQSVVSNPVPGKNSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSDWNLVIQHPNFDNLTQLFSFNYQSINPYGPINDTAMLWGVKFYNDFLMQAGPLGNVQSELLFKKDKTTFTFDKGWAFPRRVYFNGDVCVMPQPDAYPWLPNTGSKQEVSLLALVMTSLLALVLLYAYA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00183 459 ProSiteProfiles Gram-positive cocci surface proteins LPxTG motif profile. 430 459 IPR019931 -
Pste9g00183 459 PANTHER PROTEIN COBRA 25 448 IPR006918 GO:0010215|GO:0016020
Pste9g00183 459 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
Pste9g00183 459 PIRSF COBRA 12 459 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00183 Pste-Chr9 729879 734577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00183 14 457 COBRA Gene Family AT3G02210 73.258 0.0 695
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00610 5 3958030 3979459 Pste9g00183 9 729879 734577 PCT