Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00181 GTAGATTAGAACCATAAAGGGTCACAACATCTTTGGTTTGTTTCCTCTTGAGGTTGCATTCAATGTTTTGATGTGAATCCTAACAACAATGTCTAACTTGGAGGAATTGAGAAAAAAACTTACACCTTTGTTCGATGCGGAGAAGGGTTTGGGTTTCTCATCCAGTTCTACTTTGGAACCGTGTGATTCTTACACATTCTCAGATGGTGGGACTGTGAACTTGTTGAGTAGATCATATGGAGTGTACAATATCAATGAGCTTGGGTTCCAGAAGTGCACATCTACGTCTGTGGATGAAACTGATCGCAGTGAGAAAACGTATAGATGTGCTTCCCATGAGATGAGAATATTTGGAGCAATTGGGAGTGGTGCCAGTAGTGTTGTCCAGAGAGCTATACATATACCAACACATAAGATTTTGGCTTTAAAGAAGATCAATATCTTTGAGAAGGAGAAAAGGCAACAGCTCCTTACTGAGATAAGAGCATTATGTGAAGCACCGTGTTATGAGGGTCTAGTTGAATTTCATGGGGCATTTTACACTCCAAACTCTGGGCAGATAAGCATAGCATTGGAGTATATGGATGGAGGATCACTTGCAGATATCTTGCGAATGCATAGAAGTATACCTGAACCTATTCTCTCTTCCATGTTTCAGAAGCTCCTACGTGGTCTCAGCTATCTTCATGGAGTCAGACATCTAGTTCACAGAGACATAAAGCCTGCCAATCTACTACTAAATCTCAAAGGGGAGCCAAAGATTACTGATTTTGGTATTAGTGCTGGCTTAGAGAACTCAGTGGCAATGTGTGCTACATTTGTTGGAACTGTTACATACATGTCACCTGAGAGGATTCGAAATGAAAGCTACTCTTATCCAGCAGATATTTGGAGCCTTGGTCTAGCTCTTCTTGAGTGTGGGACAGGAGAATTCCCATATACTGCAAATGAAGGTCCTCTCAATCTTATGTTGCAGATCCTCGATGATCCATCACCATCACCATTGAAAAACAAATTTTTGCCTGAATTCTGCTCCTTTGTTGATGCTTGCTTACAGAAGGATCCAAATAGTAGACCAACAGCGGAACAGTTGCTTTCACACCCCTTTATCACAAAGTATGAGGATGCCAAGATAGATTTAGAAGGATTTGTTCGAAGCGTTTTTGATCCTACACAAAGAATGAAGGATTTAGCAGATATGTTGGCAATACATTATTATTCGCTATTTGACGGACCTGATGATTTGTGGCAACATACGAGTAACTTATACAGAGAACACTCAATTTTCAGTTTCTCTGGGAAACAACATTGTGGTCCAAGTAATATCTTCACGTCTCTATCAAGTATTAGAACTACATTGGTTGGTGATTGGCATCCTAAAAAGTTGGTGCATGTGGTTGAGAGACTTCAATGTCGCGCTCATGGTGAAAATGCAGTTGCAATCAGGGTATCAGGATCCTTCATAATTGGAAATCAATTTATCATATGTGGAGATGGCATGCAAGTAGAGGGCTTGCCAAACTTCAATGATCTTGGAATTGATATTTCTAGCAAACGAATGGGTACATTTCATGAACAATTCATTGTGCAACCAACAACTCTAATTGGATGTCACAGCATTGTTAAACAAGAGCTATGCATTAATAAGTAATGTTACATTTTGTTGTCAGTCAATTCAATGCACACTTTAATACGAAGAATCATGACTTCCAAACACTCATGTTCTCCCACGTGTAAAATTTACAAATTTGTTATAATGATACAAATTCATTTTAACAAGTC 1782 0.3923 MSNLEELRKKLTPLFDAEKGLGFSSSSTLEPCDSYTFSDGGTVNLLSRSYGVYNINELGFQKCTSTSVDETDRSEKTYRCASHEMRIFGAIGSGASSVVQRAIHIPTHKILALKKINIFEKEKRQQLLTEIRALCEAPCYEGLVEFHGAFYTPNSGQISIALEYMDGGSLADILRMHRSIPEPILSSMFQKLLRGLSYLHGVRHLVHRDIKPANLLLNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALLECGTGEFPYTANEGPLNLMLQILDDPSPSPLKNKFLPEFCSFVDACLQKDPNSRPTAEQLLSHPFITKYEDAKIDLEGFVRSVFDPTQRMKDLADMLAIHYYSLFDGPDDLWQHTSNLYREHSIFSFSGKQHCGPSNIFTSLSSIRTTLVGDWHPKKLVHVVERLQCRAHGENAVAIRVSGSFIIGNQFIICGDGMQVEGLPNFNDLGIDISSKRMGTFHEQFIVQPTTLIGCHSIVKQELCINK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00181 520 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 27 399 - -
Pste9g00181 520 SUPERFAMILY Protein kinase-like (PK-like) 87 391 IPR011009 -
Pste9g00181 520 CDD PKc_MAPKK_plant_like 86 345 - -
Pste9g00181 520 Gene3D - 367 516 - -
Pste9g00181 520 SUPERFAMILY NTF2-like 366 464 IPR032710 -
Pste9g00181 520 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Pste9g00181 520 SMART serkin_6 85 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00181 520 FunFam Mitogen-activated protein kinase kinase 3 365 519 - -
Pste9g00181 520 FunFam mitogen-activated protein kinase kinase 3 167 363 - -
Pste9g00181 520 ProSiteProfiles Protein kinase domain profile. 85 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00181 520 Pfam Protein kinase domain 89 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00181 520 ProSiteProfiles Nuclear transport factor 2 domain profile. 368 518 IPR018222 -
Pste9g00181 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pste9g00181 520 Gene3D Phosphorylase Kinase; domain 1 58 166 - -
Pste9g00181 520 Gene3D Transferase(Phosphotransferase) domain 1 167 366 - -
Pste9g00181 520 FunFam mitogen-activated protein kinase kinase 3 58 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00181 Pste-Chr9 723048 727517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00181 32 519 MAP Kinase Kinase Gene Family AT5G40440 75.820 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pste9g00181 Pkinase 2.2e-59 CL0016