Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00175 TGTGGCTGTTATCCCTGCGCAAAGTTGAAAAATAAGAAAATAAAAGAACGCGATGGAGGAAGCGAAGGAAAAGAATTGGAGAATGGAAGTGGACGAGAAGCTGAAGAGACTTCAATCACTTCTCTTCGGCGCTGAGCGCGCTCTCGAGAACAAGGACTTCTCCTCCGCTTACGTTCTCACGCTTCGCCTCCTCGGATTCCTCGACGCGCACTCTCATTCCGACGTGGACGAAGCCTTCGTCCGACCTATTCGCCGCGAAGCGCTCGCCAAACTCCACCTCGCTCGCCAATCCCTCACTCCTCAATCTGATCGCCAAGCTTTTGAGCAAGCAAAGAAATCTCCAGGAAGCATTTTTTGCACAACAGGAAATATTGACATTGAGAAGATTCGGAATTCAAAGTACTTTCAAGCTCTTGTGAAGCAATCTAAAGAAAAGGAGGAGAATCAATTGGCAAGACATGCTAGCAATCACACTGTTGATCACCTGGGGAAACAGGACAAAGCAGGAAGCAAAGCCTCGAAGCAAATGGTGCAAACCAAGTTACCATCTATGTATGGGAAAAGTAGCTTGAGGACTAGCAACGGTTCCAAGAGCTTTTTGAACATGAAAAATAATAGCTCTGAGGTCTGCATGATTCTTGATAGGCCTCAATCTCATACCAGCATTACAAAGGGTCCTGCTGTCTCTTCTGTTTTGCAAGTTGACGGAGAAGAAAGAGCTTTCGGAAACACATTCTCCGCAAAGCGTGTACACATGGAAAATTATAGCCCCCGAGTTGGATATGTGAAGTCACCTTCAAGTAAGGAGGAAGTTAACCCCGCTGTTTGTGGCACTGGGTTTGTTACTGCTAGAACAAAACTGGAAATGGAAGCAAAGCAAAAGCGAGGAGTAGGTGGTTCACCCAATGCCTCTGTTTCCCCACAATGTGATAACAATTCGGCCAACAGGTTGTATGGTGGGAGATCATATGGTGTTGCACGACGTGGCTTCCGTGGTAATTTTGTTCCCCCTATTAAATCCAATGGAAACAATGCTGGAAATATGAGCACGCGCATTGGTGGAAAATGTGATGATTCTTTAGATGACTCTACAAAGAAATGTCTGGAAATGCTGTGTGGTCCTGATGGTGAGCTTCCTGAAAAATTGAGGAATTTGGAACCCCGCCTCATTGAACATGTTAGTAATGAGATAATGGATAGAGATCCCAATGTCCGGTGGGATGATATTGCTGGATTGGAGCATGCCAAGGAATGTGTGAATGAAATGGTCATATTGCCTCTGCTACGTCCTGACATATTCCAGGGCTGTCGCTCACCTGGGAGGGGTCTGCTTCTGTTTGGTCCACCAGGAACTGGGAAAACAATGATAGGAAAAGCCATAGCAGGAGAGGCAAAGGCAACCTTCTTTTACATATCTGCTAGTTCGTTGACTAGCAAGTGGATCGGTGAAGGTGAAAAACTAGTAAGAGCCCTTTTTGGAGTTGCTAGTTGTCGTCAACCAGCAGTAATTTTTGTTGATGAAATAGATTCGCTCCTGTCTCAGCGTAAATCAGATGGCGAGCATGAATCAAGTAGGCGGCTAAAGACACAGTTTCTCATTGAAATGGAAGGCTTTGACAGTGGTAGCGAGCAAATTCTGCTTATAGGTGCAACAAATCGTCCCCAAGAGCTTGATGAAGCAGCGCGAAGGAGACTTACTAAAAGGCTTTATATTCCGCTACCATCCTCAGAGGCAAGAGCTTGGATTGTACGTAACCTTCTAGAGAAAGATGGGTTATTCATGCTAGCAAAGGAGGAAATGGATATCATATGCAAATTAACGGAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGACCCCTAAGAGAGGCTTTGAAACAAGGCATAGAAATTATAAAGTTGAAAAAGGAAGATTTGCGAGCCGTAACTCTTCAGGACTTCGAGAATGCCCTTCAAGAAGTGAGACCTTCTGTTTCCCCAAATGAACTTGGCACTTATGATCAATGGAACAAGCAATTTGGAAGCCTATCACTGTAGTGGCACATGTTATCACTGTATGGACACAGCATATCAACAGCTACTTACAGATGGTAGCAACTAGGAATAACGTGAAACCGATAGAGCTGTACCTTAATACCTGCAATATGGTAATCTTTATGGCTAAATAACTCACATTGCGCCCTGCACAACCCATAACATAAAATTCAATTGGAGCAAGCAAGTGGAACACGATGACCAGGGTTTTAAGAAATTTAGGACTCAAGCACAAAGCATTTATGTACATGTTCAATGATTAGGATTAGCTAAAACAAATGCAGAACTTCATTGCATTGTTTGTCCGAGCATTTGCTTTTTTTACCGATTCAGAAACTACTGTAACAGTCTAA 2406 0.4385 MEEAKEKNWRMEVDEKLKRLQSLLFGAERALENKDFSSAYVLTLRLLGFLDAHSHSDVDEAFVRPIRREALAKLHLARQSLTPQSDRQAFEQAKKSPGSIFCTTGNIDIEKIRNSKYFQALVKQSKEKEENQLARHASNHTVDHLGKQDKAGSKASKQMVQTKLPSMYGKSSLRTSNGSKSFLNMKNNSSEVCMILDRPQSHTSITKGPAVSSVLQVDGEERAFGNTFSAKRVHMENYSPRVGYVKSPSSKEEVNPAVCGTGFVTARTKLEMEAKQKRGVGGSPNASVSPQCDNNSANRLYGGRSYGVARRGFRGNFVPPIKSNGNNAGNMSTRIGGKCDDSLDDSTKKCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKECVNEMVILPLLRPDIFQGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLFMLAKEEMDIICKLTEGYSGSDMKNLVKDASMGPLREALKQGIEIIKLKKEDLRAVTLQDFENALQEVRPSVSPNELGTYDQWNKQFGSLSL 667
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00175 667 SMART AAA_5 422 558 IPR003593 GO:0016887
Pste9g00175 667 Gene3D - 557 643 - -
Pste9g00175 667 Gene3D - 385 659 IPR027417 -
Pste9g00175 667 Pfam ATPase family associated with various cellular activities (AAA) 426 556 IPR003959 GO:0005524|GO:0016887
Pste9g00175 667 ProSitePatterns AAA-protein family signature. 528 547 IPR003960 GO:0005524|GO:0016887
Pste9g00175 667 MobiDBLite consensus disorder prediction 128 151 - -
Pste9g00175 667 MobiDBLite consensus disorder prediction 275 295 - -
Pste9g00175 667 Pfam Vps4 C terminal oligomerisation domain 629 663 IPR015415 -
Pste9g00175 667 PANTHER AAA DOMAIN-CONTAINING 158 664 - -
Pste9g00175 667 FunFam Fidgetin-like 1 385 567 - -
Pste9g00175 667 MobiDBLite consensus disorder prediction 128 182 - -
Pste9g00175 667 MobiDBLite consensus disorder prediction 154 182 - -
Pste9g00175 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 662 IPR027417 -
Pste9g00175 667 FunFam Fidgetin like 1 557 643 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste9g00175 Pste-Chr9 699131 709796 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00175 341 665 Calmodulin-binding Proteins AT3G56690 30.383 1.43e-38 151