Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00150 GTTGTGTTCGGTTCGTCTCTTACAAAGTCTCCACCTACGCACAAGAGGCGCACGCACCACGCTCACACTCTCAGCTCCTCCGTCCAATCGCCGCCGCCGCCATTGACCGTCATCGCCGTTCGACGCCGTCGGGCGTGGTTCCATTCCACGACTACTTCTCTCTCTCAGGGTTTTGAATTGAGGGAAATGATATGGAGTTGGCTGTGGAAGGGTATACGGGTGAGATTGAGAAGAACACAAAGTTTGTGTCGCCAATGCCATTCATGGAAAGTGAACAGTGAGAGTGTCAAGTGTACCTTGTCTCAATGTCCGTCTGATTTGATAGCCCTATCCTTTTTCTTGTGGTCAGCCCAACGGCGCCGCAATGACTCGGTTGCCTTTGATCGCATCGTAACTGTGCTCCGTCGCCTCACTGACCGCTACGACACTGTCCCAACCATTCTTGACCAGTTGGAGACCATTGGCTGTACCTCTCTCACAAACCCTAAATCTCAGTTGGCGTTGTTGAGGATTTACTGGCGTGCAGGTATGTATGGCATGCTGTTTGAGGCTTATCACCACTTGCAAGCTGCTTACGATTTTGTCCCTGACACTTTTGCTCGCAATTTGCTTATGGATGTTCTCTTCAGGATTGGTCAGTCCCACCTCGCTCTCACACTCTCTCTCTTTAACCACACTCATCCTCCTAATTTCTTCACCTTCAACATTGCTCTCCTTCATCTTTCCAAATCCAACCACAACCACCATAGTCTCCCTCCTATTCTTAGACTTATGCTCAGGGCTGGCTATTCTCCCTCTCCTCACACATTCAACATGCTTCTCAATACTTTCTGTAGCATTAATGCACTGCGGCAGGCTTACCAGCTCCTTGCTCTCATGACTGTTATGGGGATCAATTTCTCGGTCTATATTTGGACCATTATCATCCATAACTGTTGTAAACTGGGTCACCTTCATCTTGCTGCCAACCACTTCCAAAACATGGTTCAGACTGGTTGTTCTCCTAATGTTGTAACATATACCACCTTATTTAAGGCACTTATGCAATCCAACATGGTAGCTCGTGCTTTACGTTTGTTTAATGTCATGTTATCTACTGGCCAAATTCCGGATTTAATTCTTTGTAATGTCTTAATTGATTGCCTTTCAAAGTCTGGAAGGTGCCACGATGCAATTCGAGTTTTTCTCAGTTTGTCGGACCATAACTTAAAACCTGATTCTTATACCTTTACTTCATTGTTATATACAATCTGTCGCTCCAGAATGTTTCATCTTTTACCCAAACTAGTTCTAGTCTCCAGACATATAGATGCTGATCTAGTGTTCTGTAATACCCTTTTAAGCTCTCTTACTAAGGCTGATCTTCCTTCTCTCGCCATTGGATTCTATGACCATATGATCAATGAAGGTTTTGTGCCAGATAAATATAGTTTTGCTGGATTACTAAGCGCACTCTGTGCTGTGGGAAGGGTTGATGAAGCAGTTAATGTGTATCATGGTGTTGTTATGAGTTATCATGATACTGATTCTCACGTCCATACTGTAATAACAAGTGGTCTTATAAAGACCAGAAAGTATCACAAGGCTGCCAGTTTTTTCAAATCTGCTGTAATGAATAAATATCCACTTGACAATGTAGCTTACACGGTTGGCATTTGTGCACTACTTAGGGGTAGAAGAAATCAAGAGGCTTGCACATTGTATGAACAGATGAAGGACAGTGGTTTGAAGCCTTGTGTTCATACCTATAACATGATGTTTTTAATATTTTGTAAAGAAAGAAATTTCCTCATGATAAATCAGATACTAAAAGAGATGATTGATTCAAGGATACAACTGAGTGACAGAAATTTCTTCAACTTATATAAATATGCATGTAGATCGGATACTTATATTTCTGCTCTAGAGTTGTTGGTTGAGATGAGAGATCTGAGGCTGTTATCTGCCAAGGGCTTGCATGCATTAAACTTTGATAGGCATTCTGAAGGTGTACAGTCAAAACATAAACATCAGACAGAAGCTGGAGCACAATGGAATCCAACTCTAGATTCATCCAGTTCTGAAGATATGTCAGACGTAGCTGCTTCAAATTACAATTCTCTTGACTCAATCGAACCAGCAAAGGTCATTGCAGAAAAGGACCAAAGTGCTTCTGATGCTACAATGTCATCTAAGATTGATCGTACTAAGAAGAAGAAAAATAAGGAAACTATGCTTCATGTTCTAGCAGGTGTTAGTGCGCGGTTAACACAACTAGAAACCAGAACCCACCATCTTGAAAATTCTGTTGAGGATTTGAAGCTATCTGTTGGAAATGATCATGATAGCACTGGTGGAAAATCGAAGCAGCTCGTGAATATTCTTGGAGAGACTGAAGACATCTCTTCCCAAGATCCACATCCAGTACAACTTACTGATGAGGCATTTCCAGGAGGTCCTCAAGATTTGTCTGTGCTTAGGTCCTTTACTGATCATGTTGCCACACGCCTATGGATAGGAGAGGATCGTCGAGAGTTGAAGGTGGTTAGTCATGGAAGGAAAGTCATGGACTTCCACTTGGAGAATGAGCAAGTCAAGGCCATACTCCTTGGGGCCACCAAAGAGGAGGCTGTCATAGAGACAAGATTCACTAGAGGAGCACATGTGCGATTCAGGTGGCTCCAAGATTTGTATGAGGTAAACATCCAAGACGGGCACTTTGACTATGCCGCAAGAGCTTTTTTGTTGTATTTAGTGGGTTGCACCATCTTTGCTGACAAAAGTGCTACATATGTTGATGTGGCATTGTTAGAGCTTTTTCGTGACCTTAAGACATGTGGAAGGTATGCATGGGGTGCCTCTGCCTTAGCATACATGTATGATCAACTCAACGATGCTAGTATGCATCATACAAAGCAGATGGCTGGATATATGACTCTTCTACAGTGCGTGGATGGCTACATGCGTTGGTTCCACACTATTTCCCACCCCTACCTTATACCCCCACGTGAAGGTGATCCTCCAAGAGTCCCAGTGCACCTCCATACTAGTCAAGCAGACTCTAGTTCAAGTGACTCTCATTCTTGTTCGGAACGCTTTGAGAGAATTTCTGAGCTACTTCAATCCATGCTTGATCTGCGGATGATCACGGATGGGACTGACGCTTGGAACACTACACAGCAAGCATTAAACATCTCGCGAGCTGCTACTCAGGCAGATTGTCAAAATATACATTTTGAAAAAAAGATTGAGATTGAGAAAGGTGAAGGAAGAAGGATTGAAGAGGTTGTTCGGTTTTGTTGTATGGTACAAGGTGAGGACAGTAGAGTCTCTGGCACGCACCTAACCGAGTCTTGTTTTGGGTTGGGTTGGGTTGCTTCAGTCTCAATTATGGATCTCAGTCACGGATCTTCCGCTACGCCGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGCAAGGACTTCATCGACCTCATGAAGCACGAAGCACCGCAACATCATCATCATCATCATCATCATCATCATCATGATCTCGATGATTATGAAGATGAAGAAGAGAAAACGCGAGCTAATGGGATCGCCAAAGACGATATCGTTCCCAGTTACGATTTCCAACCCATTCGCCCTCTCGCCACTTCCGCCCCCAATTTCGGTGCTGCATTCTCTCGCCCTTGGAACTCCGATTCCAACTCCAACCCTTCCCCTCCCATCATCAAAAACTACAGTTCTCTGGATTCAGTGGAACCTGCAAAGGTCATTGTAGAAAAGGATCGAAGTGCTTTTGATGCTACAGTGTTGTCTGAGATTGATCGTACCATGAAGAAACATATGGAAAATATGCTTCATGTTCTGGAAGGTTTTAGTGCGCGATTAACACAACTAGAAACCAGAACCCACCATCTTGAAAATTCTGTGGATGATTTGAAGGTATCAGTTGGAAATAATCATGGTAGCACTGATGGAAAATTAAGACAGCTGGAGAATATTCTTCGAGAGGTGCAATCAGGGGTGCAGACTATCAAGGACAAGCAAGATATTGTGCAAGCCCAGCTGCAACTGGCAAAGCTACAAGTGTCCAAGACAGATCAACAATCAGAAATTCAAACTAGTGCAATTTCTGACCCTGTTCAGCAAGCTGCATCTGCTCCTGTGCAATCTCAACCACAGCTTCCTACCCCTGCTAATCTTCCACAATCAATTCCTGTTGTTCCTCCCCCTAATGCACCTCCTCAACCTCCTCCACAACAGGGTTTGCCACCTCCAGTTCAACTTCCAAATCAATTCTCTCAGAACCAAATCACAGCTGCTCCTCAGAGAGATCCATACTTCCCACCGCCTGTTCAGTCTCAGGAAACACCAAATCCGCAATACCAACTTCCCTTATCTCAGCAGCCACATCCTCAGCCCGGGGCACCTCTGCATCAACAATATCAACATACCCCACCACATCCCCAGTACCCTCAGCCAGCACCTCATTTAGCTCAACAGCAGCCACCATCACATCCATCCATGAATCCGCCACAACTACAATCTTCATTAGGTCACCATGTTGAGGAACCACCTTATCCTCCTCAGAATTATCCTCCCAATGTCCGCCAGCCGCCATCTCAGTCACCCACCGGTCCTCCTCCACCTCAACAATTCTATGGGACACCGCCCCACGCATATGAACCGCCATCTAGCAGATCTGGTTCAGGCTATTCTTCTGGATATGGTACTTTATCTGGTCCTGCTGAGCAATATCGTTATGGTGGACAACCTCAGTATGGTGGCACTCCAGCACTAAAACAACAACTGCCAACTGCTTCAGTGGCTTCGAGTGGTGGAAGTGGTTATCCTCAGCTCCCAACTGCCAGGGTACTCCCACAAGCTATACCTACAGCATCTGCAGTCAGCAGTGGCTCGGGTTCTGCTGGAACGGGAGGCAGGGTTTCTGTCGATGATGTGGTGGACAAAGTTGCTAGTATGGGATTCCCCAGAGACCATGTCAGGGCCACAGTTCGGAAGCTGACAGAGAATGGGCAGTCAGTTGACCTAAATGCAGTGCTGGATAAGCTCATGAATGATGGTGAAGTCCAACCCCCAAGAGGTTGGTTTGGTCGGTAGCATGACGTGATTAATTGATGTATAGAAGAATCACTTTCTCCATGATAAAAGGTTTATGAGACTTTGTGGTTGGTTGGATTGTTCCAAAGTGAATATTTTGACTCTTTTTTTCCTTTACTCTATTCTTGTTTCTTGGGAAGTTGAAACTGGTTTGCTTTCTTGTCTGGCTCCAATTTATGACTATCTTCATCTTGCTTTGTATATTCGCAATAAATAGAAGTGGATTCCAAAAATTTCTTAGAAGTTAGAACAGCTCAAGTTCTGTCACTTTTCTCGTGTCAGTCACGTTGGAATATTAGTTTTAGATTAAAAGCTCACTTATTTGTTTCTATATTGAGGAATTGATTCTGACTTTAGAATTGAAGTAATTTAAGTAACTTTTAC 5472 0.4432 VVFGSSLTKSPPTHKRRTHHAHTLSSSVQSPPPPLTVIAVRRRRAWFHSTTTSLSQGFELREMIWSWLWKGIRVRLRRTQSLCRQCHSWKVNSESVKCTLSQCPSDLIALSFFLWSAQRRRNDSVAFDRIVTVLRRLTDRYDTVPTILDQLETIGCTSLTNPKSQLALLRIYWRAGMYGMLFEAYHHLQAAYDFVPDTFARNLLMDVLFRIGQSHLALTLSLFNHTHPPNFFTFNIALLHLSKSNHNHHSLPPILRLMLRAGYSPSPHTFNMLLNTFCSINALRQAYQLLALMTVMGINFSVYIWTIIIHNCCKLGHLHLAANHFQNMVQTGCSPNVVTYTTLFKALMQSNMVARALRLFNVMLSTGQIPDLILCNVLIDCLSKSGRCHDAIRVFLSLSDHNLKPDSYTFTSLLYTICRSRMFHLLPKLVLVSRHIDADLVFCNTLLSSLTKADLPSLAIGFYDHMINEGFVPDKYSFAGLLSALCAVGRVDEAVNVYHGVVMSYHDTDSHVHTVITSGLIKTRKYHKAASFFKSAVMNKYPLDNVAYTVGICALLRGRRNQEACTLYEQMKDSGLKPCVHTYNMMFLIFCKERNFLMINQILKEMIDSRIQLSDRNFFNLYKYACRSDTYISALELLVEMRDLRLLSAKGLHALNFDRHSEGVQSKHKHQTEAGAQWNPTLDSSSSEDMSDVAASNYNSLDSIEPAKVIAEKDQSASDATMSSKIDRTKKKKNKETMLHVLAGVSARLTQLETRTHHLENSVEDLKLSVGNDHDSTGGKSKQLVNILGETEDISSQDPHPVQLTDEAFPGGPQDLSVLRSFTDHVATRLWIGEDRRELKVVSHGRKVMDFHLENEQVKAILLGATKEEAVIETRFTRGAHVRFRWLQDLYEVNIQDGHFDYAARAFLLYLVGCTIFADKSATYVDVALLELFRDLKTCGRYAWGASALAYMYDQLNDASMHHTKQMAGYMTLLQCVDGYMRWFHTISHPYLIPPREGDPPRVPVHLHTSQADSSSSDSHSCSERFERISELLQSMLDLRMITDGTDAWNTTQQALNISRAATQADCQNIHFEKKIEIEKGEGRRIEEVVRFCCMVQGEDSRVSGTHLTESCFGLGWVASVSIMDLSHGSSATPPQQQQQQQQQQSKDFIDLMKHEAPQHHHHHHHHHHHDLDDYEDEEEKTRANGIAKDDIVPSYDFQPIRPLATSAPNFGAAFSRPWNSDSNSNPSPPIIKNYSSLDSVEPAKVIVEKDRSAFDATVLSEIDRTMKKHMENMLHVLEGFSARLTQLETRTHHLENSVDDLKVSVGNNHGSTDGKLRQLENILREVQSGVQTIKDKQDIVQAQLQLAKLQVSKTDQQSEIQTSAISDPVQQAASAPVQSQPQLPTPANLPQSIPVVPPPNAPPQPPPQQGLPPPVQLPNQFSQNQITAAPQRDPYFPPPVQSQETPNPQYQLPLSQQPHPQPGAPLHQQYQHTPPHPQYPQPAPHLAQQQPPSHPSMNPPQLQSSLGHHVEEPPYPPQNYPPNVRQPPSQSPTGPPPPQQFYGTPPHAYEPPSSRSGSGYSSGYGTLSGPAEQYRYGGQPQYGGTPALKQQLPTASVASSGGSGYPQLPTARVLPQAIPTASAVSSGSGSAGTGGRVSVDDVVDKVASMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNDGEVQPPRGWFGR 1695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00150 1695 Gene3D Tetratricopeptide repeat domain 130 314 IPR011990 GO:0005515
Pste9g00150 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 439 473 IPR002885 -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1476 1499 - -
Pste9g00150 1695 NCBIfam pentatricopeptide repeat 338 371 IPR002885 -
Pste9g00150 1695 NCBIfam pentatricopeptide repeat 443 474 IPR002885 -
Pste9g00150 1695 NCBIfam pentatricopeptide repeat 303 337 IPR002885 -
Pste9g00150 1695 NCBIfam pentatricopeptide repeat 374 407 IPR002885 -
Pste9g00150 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 301 335 IPR002885 -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1416 1431 - -
Pste9g00150 1695 Coils Coil 1317 1337 - -
Pste9g00150 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 544 578 IPR002885 -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 713 733 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1585 1607 - -
Pste9g00150 1695 Pfam Plant mobile domain 844 976 IPR019557 -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 663 690 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1555 1569 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 670 690 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1367 1387 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1157 1190 - -
Pste9g00150 1695 Pfam PPR repeat family 370 419 IPR002885 -
Pste9g00150 1695 Pfam PPR repeat family 302 348 IPR002885 -
Pste9g00150 1695 Pfam PPR repeat family 544 592 IPR002885 -
Pste9g00150 1695 Pfam Pentatricopeptide repeat domain 232 277 IPR002885 -
Pste9g00150 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 371 405 IPR002885 -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1 32 - -
Pste9g00150 1695 Pfam UBA-like domain (DUF1421) 1640 1684 IPR010820 -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1128 1147 - -
Pste9g00150 1695 Gene3D Tetratricopeptide repeat domain 503 734 IPR011990 GO:0005515
Pste9g00150 1695 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 682 790 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1367 1610 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1388 1415 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1515 1546 - -
Pste9g00150 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 336 370 IPR002885 -
Pste9g00150 1695 Pfam PPR repeat 442 471 IPR002885 -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 998 1021 - -
Pste9g00150 1695 MobiDBLite consensus disorder prediction 1169 1187 - -
Pste9g00150 1695 Gene3D Tetratricopeptide repeat domain 315 432 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00150 Pste-Chr9 615394 628248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00150 683 793 Trihelix Transcription Factor Family AT5G14540 50.450 7.08e-25 109