Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00140 ATGTTTCCTTCACAAAGATCCATTCTCATTCCACCATCACCCCCATTCACTGGTCTTAATCCCAACAACAATTTCCACCATTTTGAAGATCACATGAACTTTCCTACCCAAAACCCTTTTGTCCTGGAGGATCCTTTCGACCCCATCACCAACCTCTTCAATATGGGACAAACCCATTATTTGGAAGAAGGGTCTTCTGCACTAGGGTTTGCTAATGTTCACTCCCGAGTAGGGTTATCACCCAACTACAACAATGATTTCTCAGAGCAAACAATGGTTTATTCTTTAATGACACCTCTTCCTAATGAGTATGGATATAACTGTGAGATTGATGAGAGCAACCAACTGAGTGAAAAGTATCACAACATTGAGAAAGACAACACAAAATGCCAATGGACTCCAGGAGAGGATAGTGCTCTTGTGGAGTTGATAAACCAATTTGGCCTAAAACAATGGGCACAAATTGCAAAGTCACTGCATGGAAGGAGTGGGAAGCAGTGTCGAGAAAGATGGCTCAACCACCTCCAGCCAAATATTACGAAGGGTCCATGGACCTTGGAGGAAGACATGATTCTTATCAGAGCCCACCAAGAACTCGGAAACAAATGGTCTGAGATTGCAAAGTGGTTGCCTGGTAGGGCTGAGAACACCATCAAGAACCATTGGAACTCCACTAAGCGGCGCCTTAATTGTAAGAGACATAATAGGAGCAAGCATGGTACATATGAAGGGTCATTACTAGGTGCCTATATCAAATGGCTCACAACAACCAAAGAATCCACAGAACTACTCGAGCCTGAGCAAGAAGAATAA 813 0.433 MFPSQRSILIPPSPPFTGLNPNNNFHHFEDHMNFPTQNPFVLEDPFDPITNLFNMGQTHYLEEGSSALGFANVHSRVGLSPNYNNDFSEQTMVYSLMTPLPNEYGYNCEIDESNQLSEKYHNIEKDNTKCQWTPGEDSALVELINQFGLKQWAQIAKSLHGRSGKQCRERWLNHLQPNITKGPWTLEEDMILIRAHQELGNKWSEIAKWLPGRAENTIKNHWNSTKRRLNCKRHNRSKHGTYEGSLLGAYIKWLTTTKESTELLEPEQEE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00140 270 FunFam Transcriptional activator Myb isoform A 128 180 - -
Pste9g00140 270 Gene3D - 129 180 - -
Pste9g00140 270 CDD SANT 183 226 IPR001005 -
Pste9g00140 270 Gene3D - 183 243 - -
Pste9g00140 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 124 179 IPR017930 -
Pste9g00140 270 PANTHER MYB PROTEIN-RELATED 129 239 - -
Pste9g00140 270 Pfam Myb-like DNA-binding domain 132 189 - -
Pste9g00140 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 230 IPR017930 -
Pste9g00140 270 ProSiteProfiles Myb-like domain profile. 176 226 IPR001005 -
Pste9g00140 270 ProSiteProfiles Myb-like domain profile. 124 175 IPR001005 -
Pste9g00140 270 CDD SANT 132 175 IPR001005 -
Pste9g00140 270 SUPERFAMILY Homeodomain-like 128 222 IPR009057 -
Pste9g00140 270 SMART sant 128 177 IPR001005 -
Pste9g00140 270 SMART sant 180 228 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00140 Pste-Chr9 593722 595473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00140 1 255 MYB Transcription Factor Family AT5G40360 38.346 5.35e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g00140 Myb_DNA-bind_6 1.9e-16 CL0123