Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00119 ATGCCTGTTCAGATACCCTTCATGGAGTCACCTGTTAATGGAGTTGATTCCTTATCAGAGGTTCAGAATTCAGTTTCTGGGGTACATCATGATCCTCTTTCATCTAGGACTCCCTGTCCTTCACGGCCTCCCGTGAGAGCATCAAGAAACCATGGGGGTGGACATCAAACCAAGCCCATCCACCATCAAAATAGCCATGTAATTAATCAAAAGCATTCCTATCGGGAGGGAAACAATGTGGAGCTTGAAGGATTGCCAACAAAATTATGCAGCAAGCCACCACTTGATGATTCTAAGAATTATGAATCAAGTGGTGTATTAGAATCTGACAACTGCTTCTTAGGTCCATCAAAACGAGCTGTTGCTAATCATGCTAAGAATTACTGTCAGTCAGAGGTTAATTTCTGTCCAAGTCCTCATAATAGTTTCTATTCAGCCACTGTCTACTCAGAAGCCAAAGAAAGTTTCACCAACACTGAAGTCAGTGAGTGTGCTAGTGTTGACAAGTCACGTGGAAGTGGAGAAATGGCGAACTCTTGTGATTTTAATGAGAGCAGGAAGACCAGCATCTGTAGAGCAAGTACTGGCAGTGATGCTAGTGATGAGAGCAGCACCAGTAGTTTGAGTAGCGTTTTGTATAAACCTCACAAGGCAAATGACATAAGATGGGAAGCTATTCAAGTGATCCGAGCCAGGGATGGGATGTTGGAAATGAGGCATTTCAGGCTGTTGAAGAAATTGGGGTGTGGAGACATAGGAAGTGTGTATCTAGCAGAACTGAGTGGCACTAGAACTTCTTTTGCCATGAAAATTATGAACAAGACTGAGCTGGCTAACCGCAAGAAACTTCTGAGGGCTCAGACTGAGAGAGAGATATTGCAGTCTTTAGATCATCCTTTTCTACCCACATTGTATACACACTTTGAGACAGAAACATTCTCCTGCTTGGTAATGGAGTTCTGCCCTGGTGGGGACCTTCATGCGCTCAGGCAAAGACAACCGGGGAAGTATTTTTCAGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCATATGCTTGGGATCATTTACAGAGACCTCAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTCACATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGCACTGTGAGTCCAACTCTAGTAAAGTCGTCAAACAACAGCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCATGCATTGAGCCAACATGTGTAATGCAGCCGGACTGCATCCAACCAGCATGTTTCACGCCGCGATTTCTATCTGGAAAATCCAAGAAAGACAAAAAGTACAAACCAAAGAATGACATGCATAATCAGGTGACCCCTCTTCCTGAGCTAATTGCTGAACCAACAAATGCAAGATCAATGTCATTTGTTGGAACACATGAGTACTTGGCACCTGAGATCATAAAGGGTGAAGGGCATGGAAGTGCTGTGGACTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTCGGCAGAACACCATTCAAAGGTTCGGTGAATCGTGCGACACTGTTTAATGTAATTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGTTTTGCTGCCAGAGACTTGATTAGAGGTTTACTTGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGCGGCGCTACAGAGATAAAACAACATCCATTTTTTCAGAATGTTAACTGGGCACTCATCCGTTGTGCAAATCCTCCAGAGGTGCCAAGGCATGTTATCAAACTTCCTCAAACGGAAAAGGAGCTTGGTGTCAAGTCTTCTAGTAATTATTTAGATATTGATTTCTTTTGA 1869 0.4355 MPVQIPFMESPVNGVDSLSEVQNSVSGVHHDPLSSRTPCPSRPPVRASRNHGGGHQTKPIHHQNSHVINQKHSYREGNNVELEGLPTKLCSKPPLDDSKNYESSGVLESDNCFLGPSKRAVANHAKNYCQSEVNFCPSPHNSFYSATVYSEAKESFTNTEVSECASVDKSRGSGEMANSCDFNESRKTSICRASTGSDASDESSTSSLSSVLYKPHKANDIRWEAIQVIRARDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKIMNKTELANRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNNSLETKSSGYCIQPACIEPTCVMQPDCIQPACFTPRFLSGKSKKDKKYKPKNDMHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSVNRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRHVIKLPQTEKELGVKSSSNYLDIDFF 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00119 622 MobiDBLite consensus disorder prediction 23 65 - -
Pste9g00119 622 Pfam Protein kinase domain 242 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00119 622 Pfam Protein kinase domain 475 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00119 622 SUPERFAMILY Protein kinase-like (PK-like) 215 601 IPR011009 -
Pste9g00119 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 362 374 IPR008271 GO:0004672|GO:0006468
Pste9g00119 622 ProSiteProfiles Protein kinase domain profile. 241 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00119 622 Gene3D Transferase(Phosphotransferase) domain 1 472 595 - -
Pste9g00119 622 Gene3D Phosphorylase Kinase; domain 1 239 324 - -
Pste9g00119 622 SMART serkin_6 241 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00119 622 FunFam serine/threonine-protein kinase D6PK-like 325 392 - -
Pste9g00119 622 CDD STKc_phototropin_like 239 596 - -
Pste9g00119 622 FunFam serine/threonine-protein kinase D6PK-like 473 596 - -
Pste9g00119 622 FunFam Serine/threonine-protein kinase D6PK-like 239 324 - -
Pste9g00119 622 Gene3D Transferase(Phosphotransferase) domain 1 325 393 - -
Pste9g00119 622 PANTHER FLIPPASE KINASE 1-RELATED 105 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00119 Pste-Chr9 515705 518457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00119 149 622 AGC Kinase Gene Family AT5G47750 71.341 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste9g00119 Pkinase 5.6e-38 CL0016