Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00096 ACACACCCTAACTCCTCTCTCACACACTCTTTAGCTGCCTCCTCTGCAAGAGAAACCAAGTTGAAGATAAAAATATTCCTCAACTCAGTTAAAGAAAGAAAAAACATCTCTTCTTGGGTCTCTCAAACTCCCCTCTTCTTTGTGCTTCACTTTGGAATTGCTTGGTTTCCACTTCTTTTTGTTCCTTCTTCTGCTGCTTTTGCAGGAAATATATTCTCTTCTATGCTGTGTGAAAACCCAACATCATCCAGTTTGTGCAGTCTTATGCTTTGTATCTCTTTGCTCCATTCAAGGGCATGGAGACTCTCTTCCCTTCACATGCAAAAATACATGTAATGTATGTAACACACATAAGCATGAAATTTGCATGATCAAGTCTAATGCAAGTTCTAGTCAATGCATTAGTATAATCAATTTATCATCTTCTTTAGAATCTTCACTGACCCTGAAGGCCAAGTCCTCCTTCTGAATCAGCTTAACATATTTCATACCCTTTGTACCCCAAAAACATAAGGTCTTTAATTTCTTCTACATTCTTTGTGAGAGGGAGAATGGTAGTTGCTTAACTGAGGCCTTGTGAACTCTGAAAAGTTGAAGGGTAGCAACAAAAAATGTCTAAAAAGGTTTTGACATCAATGAAGGATGAAAATCCAGATTTGCAGAAGCAAATGGGGTGCATCAGTGGATTTTTTCAGCTTTTTGACCGCCACAAGTTCCTCACAAGCCAACGCAGTAGCACCCACAATCAGAACATGCCAACTAAAGGTGGAACCAGTAATCATATCAATGAGGAGAATAATACAACTCAAAAGGCAAAGGCAAATAATGTGAAGGTTGCTAGAGAGAATCAACAATTCTCCACAGAATCATCAAGAACTTCAATGTCTTCATCATCTCGTTCGTCTAGCATAGTCAATGCAGAGAGATGTTCATGGATTGTCCGTAAAACTGTAGCTAAAGAGGAAAAGAAGGGCTGCGTCTTGAAATACATTGACTCTCCTAGGCCTTTGAAGCCCTCCAAATTTGTCAATGCAGGAGTTATGGCTACTTGGGATTCACCAAGACTCTCTTATGATGGGAGAGATACACAAGAAGATACACGCAAATTTGCTACAACGCCAAAGGAACTCCCCAGGCTTTCCTTGGACAGCAGAGAAGGATCTATCAAAAGTTTCAATGAAGGAACAAAATCCCGCAGCCTTTTGAAGGGTCCGCAGAAAGGGTATGGTAGCTCCGGCACAATGCAGCTGCAGGAACCAGAAACTTCTAGAAGACCATCCAGTGTTGTAGCAAGGTTAATGGGACTAGAAGCCTTCCCAGACTGCACAGAAACTTGTGATACCCCACCAGGGATCTCTAGCAGGAATTATGAGTACATGCTACTCCAAGGTGCAGCATCCCCAAGAACAAGCAAGAGGCCTACCTTGTTTCAGTCCAGGAGGGATGCTTCAATCCTGAATATGATGCCATATTCACAGTTTTCCCTCGAACCAACTCCATGGAGGCAACCTGAAGCAAACCAAGGTTCTCAACTACAGGCTTCCAGGAGAAGTGAATCATCAGCAAAAGCATCAAACTTATCCCTCTCTGTATATGCTGAAATTGAGAAGAGGATAGCAGATCTAGAGTTCAAAAATTCTGGAAAAGATCTCAGGGCCCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTGGATATTACAAGAGATCAGGTGTCTAATTCTGTGTCTGACAATAGGAGTAATAGCAGTCTTAGTGAAAGCTCAATAGTAAAAAGCCCAAGAATACGGCAGAAGGACCCAACATCCACCACTGTTGAGATATTGACTTCAACCCAGGGTTGTAAGTCACCAATTTTGATCGTGAAACCAGCAAAAGCTGCAAGAAAAACCAATAGTCCTGCTTCCACACAAATGCCATTTCAGGGTAAATCAAGCCCCAGCAAGTTTAGCCCAGCTAACCCTGCGAATAGAATAATGGGTGACAAGCTTGACAGGCAAACAACAAAGGGTATCAGTCTAGCAGTCAGACACGCCAAGGATTCCTTCAGTCAACCCTTACATTCAGTGGATAAGGGTAATAAGATGAGAACTTCAAAATTGATACAATCCTCAAAAGTTCCTCAAGTAATCAACGGAGAAAATGCCACCAATTCCAGCAATACTGCAGGGGCCAAGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCACCGCCAACAAGCCCATCATCAGATTCAAGCAGTAACAGAAGACAACACATTAAGCAATCGGTGGAATTGTCTTCCCCGAGTGCAACAGCCAGACAAAAATTCAGTGAGATCAGCAATCAAAGGAAGGATTTTAAGCATGAAGTTGATGTAGAAGTTATTCACATTGATCATTCTGATAGGATAAACAGCAACTCCATCCAGCAAAAGGGCATGAATCAAAATAATGCAGCAAAAGAGTTGAGCAAGGAAAACTGTATGGCTGAGAAAATAATTACAGCAGAACAACCAAGCCCTGTATCTGTTCTTGATGCTGCTTTCTACAGAGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGACCTCTCAAAAGATTTAGATGATGCTCTGAACACTTATGATAGTAGTGAGGAGAACACAGAAGATCTTTCCTTCTCATCCAACATTGCAAAAGCCAACTTCAGGTGTGGAATCAGTGATATTGATTTGAGAACTCAAAATTTGGTCCAAATTCTCCAACAAATTGACTACAGCAATGAGAGATTCACCAATTTCAAAGATGATAAAGATCCTGATCATAAGTATATATCAGAAATACTGTTTGTATCAGGGCTGCTCAGCAGTTCAAGCTCCAGCCAGGTTTTTCATTCATCAAGTTACCCAATAAACCCAAAGTTGTTCCTTGCGCAAGAGAATATCAAGACAAACAAGATGTGTTTCAATATTGAATACAATGCCAAAATGATTGCTGGGCAGAACAGTCCTGAGCAAATTCAAAGAAAGCTAATATTTGATGTTGTTAATGAGATTCTAGCTCAGAAAATAATATTGGAAAGTTCTACTCTGTGGTGCCAACCAAATCAGCCAGCAGCTAGGAAACTAAGGGGACAGCTGCTTTTGGATAATCTTTGCACAGAAATTGATAAATTACAACATAAAAATAGGAATGTCTACCTGGCTAATGAGGATGAGAATTTGACAAGCCTCGTATGTGAAGAGTTGATGCAGTGTCCCACAATTTACACAAACAGTTACAGTGAAGTACCATATGTCGTGTTGGATATAGAGCGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTAGCTAACCATTCTGTCTATGTTGAAGAAATACATGTAGAAATGCAGATAAATGTATATATCAATGACATGATCTTTTTAAGATCAATTACAGGTGTCTTAAATTCATCAGAGTAA 3455 0.4026 MSKKVLTSMKDENPDLQKQMGCISGFFQLFDRHKFLTSQRSSTHNQNMPTKGGTSNHINEENNTTQKAKANNVKVARENQQFSTESSRTSMSSSSRSSSIVNAERCSWIVRKTVAKEEKKGCVLKYIDSPRPLKPSKFVNAGVMATWDSPRLSYDGRDTQEDTRKFATTPKELPRLSLDSREGSIKSFNEGTKSRSLLKGPQKGYGSSGTMQLQEPETSRRPSSVVARLMGLEAFPDCTETCDTPPGISSRNYEYMLLQGAASPRTSKRPTLFQSRRDASILNMMPYSQFSLEPTPWRQPEANQGSQLQASRRSESSAKASNLSLSVYAEIEKRIADLEFKNSGKDLRALKQILDAMQRYKESLDITRDQVSNSVSDNRSNSSLSESSIVKSPRIRQKDPTSTTVEILTSTQGCKSPILIVKPAKAARKTNSPASTQMPFQGKSSPSKFSPANPANRIMGDKLDRQTTKGISLAVRHAKDSFSQPLHSVDKGNKMRTSKLIQSSKVPQVINGENATNSSNTAGAKSPRLQKKFGLERRSPPTSPSSDSSSNRRQHIKQSVELSSPSATARQKFSEISNQRKDFKHEVDVEVIHIDHSDRINSNSIQQKGMNQNNAAKELSKENCMAEKIITAEQPSPVSVLDAAFYREEPPSPVKKKSDLSKDLDDALNTYDSSEENTEDLSFSSNIAKANFRCGISDIDLRTQNLVQILQQIDYSNERFTNFKDDKDPDHKYISEILFVSGLLSSSSSSQVFHSSSYPINPKLFLAQENIKTNKMCFNIEYNAKMIAGQNSPEQIQRKLIFDVVNEILAQKIILESSTLWCQPNQPAARKLRGQLLLDNLCTEIDKLQHKNRNVYLANEDENLTSLVCEELMQCPTIYTNSYSEVPYVVLDIERLIFKDLITEVVRSELANHSVYVEEIHVEMQINVYINDMIFLRSITGVLNSSE 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00096 947 PANTHER LONGIFOLIA PROTEIN 1 912 IPR033334 GO:0051513
Pste9g00096 947 MobiDBLite consensus disorder prediction 38 97 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 500 526 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 368 402 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 425 459 - -
Pste9g00096 947 Coils Coil 657 677 - -
Pste9g00096 947 Coils Coil 350 370 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 182 221 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 177 221 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 292 316 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 429 452 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 539 574 - -
Pste9g00096 947 MobiDBLite consensus disorder prediction 500 577 - -
Pste9g00096 947 Pfam Domain of unknown function (DUF4378) 730 904 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00096 Pste-Chr9 413502 419005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00096 144 909 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.190 7.45e-77 268