Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00092 ACTACTAATTTGACCAATAGAGTAAGATCTCACGTGGCCACCTATGTGCCATTGCTTTATCTTTCAGTGCGGCGAGGTCGGTTCCATTCCGGCATCTTCCTTTTCCAAGCTGCGGACTCAACTTCACCAATATTTATTCTATGCAATCAAACCAAACTTCAAAATGATATAGTGACAAAGCAGAAAATTCATGCTGCAAATTCACAATTAGGAGGCTCATTGTTGAAGGTGGAAGAGAAGAAAACCAACAACAATGAAAGAAATACAATGATCAATAGTACAAAAGAAGCAGATTTTCCACTTAAACAGGAAGGTCTTTCTTCAAGTGATCATGAAAAAGCCAAGGGTTCATCGAGCACATCCTCATCACAATGGCTAAAATTGAAGGATCCAAGGATTGTTCGTGTGTCTCGAGCCTTTGGAGGAAAAGACAGGCACAGCAAAGTGTGCACAATAAGAGGACTAAGAGATAGAAGAGTGAGGCTTTCAGTTCCCACAGCAATTCACCTCTATGACCTCCAAGATAGGCTTGGACTCAATCAACCTAGCAAGGTTGTAGATTGGTTGCTCAATGCTGCTAAGCATGAAATTGATGAACTGCCACCACTTCCTATACCCCCAGGCCAAAACACTTTATGGAAATCAAAAGGAGAAATGGTTAGTGATAAAGCAAATTGGATGAATAGAAATGAAGAGGATGAGAGCAACAATAATAATATTAACAATGATGGTGATAAACAAGGAAGCAACAATTGTCATGGTGCACATGTTTTGCCTAATAACCTCTTATCAAGAGCAAATCATCCTTCTTTTTTGGGCTTGATGAACACTATGCCATCACTTGGTCACCAATGGGAGCCTAATTCAGCTGATGTTGCTCAATGGGGACACCATGGATTTGTTAATCAAACAGATGTACACAGCATCAATGTAGTTCCATTCCCATCAACATTGGCTTTATCAACTGGGAATGCTACTTCTCAAATTTTGGTTTGTCCTCCTGGAGCAACACAACCATATTTCCCTTCGCATGTTGCAGCAATGGAGATGAATGCAAGACAAATCAACCACTATCAAATGCTGAGTTCAAGTTCTCAAAATCTCTTGTCAAATTCTCTCAATCCATCACCACAACTCATGAACCAATCAGGGAAAGTGCCATTCAGCTTGGCTAGGCCTAATAAACTTTTTCGTTCTCCTAACAGCAGTGAAAGCCATTCTCGTAAAGACCAGGATTTTCCTTCCAAGTGATCATACAAAAATAATGCAAAATAAAGTTATCAAAATTCTTCTCCTCACACAAGTCAAAACATGCATGGATCATGATGGCTGTGGGAAGTTCATTAGATGCAAGGCATATTGTTCAACGTTTTGGGGTTTGAATAAACATATATTCCTTTTTTGTCAAGTTTGATTTTCTGGTTTCCATTCAGTTTAATCTATATGGATACCATGCAAATTAAGGTCTATAAAACAATGCCTTTTTTTCAAGGGTAAGAAAGATCGTTTCCTGAAGTGATAATGTGATTTCTACGCTAAAGAGAACGCATGCTCAGATAAGTTCACTCTCTCTTACATTGAGACAGGTAGGAAAGTGGAACAACACTATATTATCATTTTGATATTGCATTTGGGAATTTTGTTTTTCCTTTTATGGTTAAAAATCTCGCGTGCTTGAATGAGATAGGATTTCTGAGTGTTTTTTGTTATAATTAT 1716 0.3834 TTNLTNRVRSHVATYVPLLYLSVRRGRFHSGIFLFQAADSTSPIFILCNQTKLQNDIVTKQKIHAANSQLGGSLLKVEEKKTNNNERNTMINSTKEADFPLKQEGLSSSDHEKAKGSSSTSSSQWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGQNTLWKSKGEMVSDKANWMNRNEEDESNNNNINNDGDKQGSNNCHGAHVLPNNLLSRANHPSFLGLMNTMPSLGHQWEPNSADVAQWGHHGFVNQTDVHSINVVPFPSTLALSTGNATSQILVCPPGATQPYFPSHVAAMEMNARQINHYQMLSSSSQNLLSNSLNPSPQLMNQSGKVPFSLARPNKLFRSPNSSESHSRKDQDFPSK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00092 416 Pfam TCP family transcription factor 142 242 IPR017887 -
Pste9g00092 416 ProSiteProfiles TCP domain profile. 142 200 IPR017887 -
Pste9g00092 416 MobiDBLite consensus disorder prediction 231 253 - -
Pste9g00092 416 MobiDBLite consensus disorder prediction 77 97 - -
Pste9g00092 416 MobiDBLite consensus disorder prediction 105 124 - -
Pste9g00092 416 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 104 376 IPR005333 GO:0003700
Pste9g00092 416 MobiDBLite consensus disorder prediction 390 416 - -
Pste9g00092 416 MobiDBLite consensus disorder prediction 230 253 - -
Pste9g00092 416 MobiDBLite consensus disorder prediction 402 416 - -
Pste9g00092 416 Coils Coil 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00092 Pste-Chr9 395615 398270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00092 66 360 TCP Transcription Factor Family AT3G02150 39.577 5.98e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste9g00092 TCP 2.5e-27 No_clan