Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00084 GAAGGCGGTTGTCAACTTCAGACATTGATCAGTTTCTCTGCCTCAACTGTTCTGTGAGTGTTTTGTTCCAATGGGTGAGGAATCAAGTTTGATTAAAGAAAGCACATCAATGAATCCCAACATGGAGGAAGAGGTTGAAGAAAGAGATCCAGAAAGCAATCCACTGAATGAGCCACTTCTAAAGAGGAACAGAACTTTGTCTGGCAATCCACTTGCTTTGGTGGGAGCAAAAGTTTCCTACATAGAAAGCTTGGACTATGAGATCAATGAGAATGACCTTTTCAAACAAGATTGGAGGAAAAGATCAAGAGCTCAAGTGTTCCAATACATATTCTGCAAATGGTCTCTGGCATTCCTTGTTGGACTTCTCACTGGTGTCACTGCCACTCTTATTAATCTTGCTATTGAGAACATTGCAGGCTACAAGCTTCTTGCTGTTGTCAGTTTTATTCAAAAAGAAAGCTACTTGACAGGTTTCCTATATTTCACGGGCGTTAATTTCCTTTTGACATTTGTTGCTTCTGTTCTTTGTGTGTGTTTTGCACCCACGGCTGCTGGACCTGGAATACCAGAAATCAAAGCTTATCTTAATGGGGTTGATACTCCCAACATGTATGGTGCTACAGTATTGTTTGTTAAGATAATTGGAAGCATTGGAGCTGTATCAGCAGGCCTAGATTTAGGAAAAGAGGGTCCCTTGGTGCACATTGGTAGCTGCTTTGCTTCCTTACTAGGCCAAGGAGGCCCTGACAATTACAGGATCAAGTGGCGATGGCTGCGGTATTTCAACAATGACCGTGATCGTCGTGATCTTATAACCATTGGTTCTTCTTCAGGGGTCTGTGCAGCTTTCAGGGCACCTGTGGGAGGAGTTTTGTTTGCTCTTGAAGAGGTTGCAACTTGGTGGAGAAGTGCTCTCCTCTGGAGAACATTTTTCAGCACAGCTGTGGTTGTTGTAGTGCTAAGGGCCACTATTGAACTTTGCCACGAAGGCAAATGTGGTCTTTTTGGTGAAGGAGGGCTCATCATGTTTGATGTGAGTGATGTCACTGTGAGATACAATGTGATGGATATCATCCCTGTTGTTATAATTGGAATCCTTGGTGGTTTATTGGGAAGCCTTTACAACCATCTTCTCCATAAGGTCTTACGTCTCTACAATCTCATCAATCAGAAAGGAAAAATGTATAAGCTCCTCCTCAGTCTTTCAGTTGCACTCTTCACGTCAGTGTGCCAATATGGTCTCCCCTTCTTAGCAAAATGCACGCCTTGTGATCCTTCCCTTCCTGAGCCTGTGTGCCCCACCAATGGCCGTTCTGGAAACTTCAAGCAATTCAACTGCCCAAATGGCCACTACAATGATCTTGCTACTCTTCTGCTAACCACCAATGATGATGCTGTTAGAAACATATTCTCAACCAACACTCCTCTTGAATACCAACCCTCGTCCATCATAATTTTCTTTGCACTCTATTGCATACTAGGACTAATCACCTTTGGAATTGCAGTGCCATCAGGGCTCTTCCTCCCAATCATTCTCATGGGTTCTGGTTACGGTCGCCTTCTTGGCATCATCATGGGGCCTCATACAAACATTGATCATGGTCTATTTGCTGTGCTTGGTGCAGCCTCACTCATGGCTGGATCAATGAGAATGACTGTGTCCCTTTGCGTGATCTTCCTTGAACTAACCAACAACCTTCTCCTACTACCAATTACCATGATTGTTCTTGTCATAGCTAAAACTGTTGGAGACAGTTTCAACCCGAGCATCTATGAGATTATTCTGCACTTGAAAGGCCTCCCTTTCATGGATGCAAACCCTGATCCATGGATGAGAAATCTCACTGTGGGAGAGCTTGTTGATGTGAAGACAGCAGTGGTTAGCTTGAGAGGAGTGGAAAAGGTAGCCAACATAGTCACTGCCTTGAAAAACACTACACACAATGGTTTTCCTGTCATAGATGGTGGGGTGGTGGCTTCAACAGGAGTGGCCAATGAGGCAACAGAACTGCATGGAATCATTCTCAGAGCACACCTTATTCAAGTGCTGAAGAAGAAGTGGTTCTTGAAGGAGAGAAGGAGAACTGAGGATTGGGAAGTGAGAGAGAAGTTCACATGGGTAGAGTTGGCTGAAAGAGAAGGGAATATTGAAGATGTGGCTGTGACTAAAGAAGAAATGGAAATGTTTGTTGATCTGCATCCTCTCACCAATACAACTCCCTTCACAGTGCTAGAGAGTATGTCAGTAGCAAAAGCAATGGTTTTGTTCAGACAAGTAGGACTTCGCCATATGCTGGTTGTGCCAAAATATCAAGCATCTGGGGTTTCTCCAGTGATTGGGATCTTGACCAGACAGGATCTACTGGCACACAACATTCTGACAGTGTTTCCTCATCTGGCAAAGTCAAAGAAGAAGCAGTGAAGCTTTCTTGTTAAATATATATCAATGAATGGACAAGCAGCTATATTGGGACAAGTCTCCTTATTCAGCAAGAAGCTGTTCCTCAGTTTTGTATTATTTGGAAAAATGCATGGAGAAGATAAGATACAACAGGACAATGATGTTAAACCATATTCAATTCCTCCTATTCTTGTCACACAGGTTTTATGAAGTATAATGAAATTAAATACCTTTCCCTATGAATGAAACATATATGGTTAAAAATAT 2671 0.4283 MGEESSLIKESTSMNPNMEEEVEERDPESNPLNEPLLKRNRTLSGNPLALVGAKVSYIESLDYEINENDLFKQDWRKRSRAQVFQYIFCKWSLAFLVGLLTGVTATLINLAIENIAGYKLLAVVSFIQKESYLTGFLYFTGVNFLLTFVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATVLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCFASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITIGSSSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRATIELCHEGKCGLFGEGGLIMFDVSDVTVRYNVMDIIPVVIIGILGGLLGSLYNHLLHKVLRLYNLINQKGKMYKLLLSLSVALFTSVCQYGLPFLAKCTPCDPSLPEPVCPTNGRSGNFKQFNCPNGHYNDLATLLLTTNDDAVRNIFSTNTPLEYQPSSIIIFFALYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGIIMGPHTNIDHGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLVIAKTVGDSFNPSIYEIILHLKGLPFMDANPDPWMRNLTVGELVDVKTAVVSLRGVEKVANIVTALKNTTHNGFPVIDGGVVASTGVANEATELHGIILRAHLIQVLKKKWFLKERRRTEDWEVREKFTWVELAEREGNIEDVAVTKEEMEMFVDLHPLTNTTPFTVLESMSVAKAMVLFRQVGLRHMLVVPKYQASGVSPVIGILTRQDLLAHNILTVFPHLAKSKKKQ 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00084 784 MobiDBLite consensus disorder prediction 1 37 - -
Pste9g00084 784 MobiDBLite consensus disorder prediction 1 15 - -
Pste9g00084 784 ProSiteProfiles CBS domain profile. 714 780 IPR000644 -
Pste9g00084 784 Pfam CBS domain 716 766 IPR000644 -
Pste9g00084 784 CDD CBS_pair_voltage-gated_CLC_euk_bac 604 768 - -
Pste9g00084 784 PRINTS Chloride channel signature 159 176 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pste9g00084 784 PRINTS Chloride channel signature 530 549 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pste9g00084 784 PRINTS Chloride channel signature 480 500 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pste9g00084 784 PRINTS Chloride channel signature 254 273 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pste9g00084 784 PRINTS Chloride channel signature 190 209 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pste9g00084 784 PRINTS Chloride channel signature 568 582 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pste9g00084 784 PRINTS Chloride channel signature 512 528 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pste9g00084 784 SUPERFAMILY Clc chloride channel 68 583 IPR014743 -
Pste9g00084 784 SUPERFAMILY CBS-domain pair 587 767 IPR046342 -
Pste9g00084 784 Gene3D Clc chloride channel 82 583 - -
Pste9g00084 784 PRINTS Plant CLC chloride channel signature 64 72 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pste9g00084 784 PRINTS Plant CLC chloride channel signature 432 448 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pste9g00084 784 PRINTS Plant CLC chloride channel signature 275 283 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pste9g00084 784 PRINTS Plant CLC chloride channel signature 289 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pste9g00084 784 PRINTS Plant CLC chloride channel signature 307 314 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pste9g00084 784 SMART cbs_1 717 770 IPR000644 -
Pste9g00084 784 SMART cbs_1 603 662 IPR000644 -
Pste9g00084 784 Pfam Voltage gated chloride channel 147 561 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pste9g00084 784 CDD ClC_6_like 59 581 - -
Pste9g00084 784 Gene3D - 586 773 IPR046342 -
Pste9g00084 784 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 21 772 - -
Pste9g00084 784 FunFam Chloride channel ClC3 82 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00084 Pste-Chr9 355790 361092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00084 23 781 Ion Channels AT3G27170 78.920 0.0 1228