Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02112 GAATTTTTTTTTTTCTTTTTCCCTGGTTGATGCTGCCTGCATCTATATATCCGTTTGTCGTTTCCTTCCTTTCTCAATCCTCTCCTTCGGTGGTGGTCTGTCCCTCTCCTCCAACAGATCCCGGCGAAGACTCCCTTCTTCTAGACCCTTCCTCATGACTCTCCCCACTCTCACAAAGTTCTCCCTCTTCATGCCGCCGCTGCCGCCGCCGCAAAACCGCCACCGTCCCCGACATGCCTGAGCTCCGAACCGGAGACAACCGAACCTCACGCGACCCGACCCGGAAAACCCGAACCAGAAGAGCCGCTGCGGGGAACAATCGGAGCAACCTTGTGCGGTGTGAAATCGGATTAGAGGAGAAGAAGGAACCACAGCTACTACTGCAACCACTCGCGCTTTCGATTAGGGTTTTCGAAGAAGAGGAAGAGAGAGTTATGGATGATGAGTACGACAGCGGCGGCGGCCGCAGCCCCGATAAGGCTCCTGCCGCCGAAGACGAAGGAAGCACCGCCCCCATTCCCGAAAGGGTACAGGTAGGGGGTTCACCGTTGTACAAACTGGACAGAAAGCTTGGTAAGGGAGGATTTGGACAAGTTTATGTAGGCCGACGAGTGGGAGTAGGTGCTGGAGCGTTAGAGGTAGCTTTGAAGTTTGAACATAGGAGTAGTAAAGGTTGTAATTATGGACCACCTTATGAGTGGCAAGTTTATAATGCATTAGGTGGTAGCCATGGTGTTCCACGAGTTCATTACAAGGGACGCCAAGGTGATTACTATGTTATGGTTATGGATATGCTTGGCCCTAGTCTGTGGGATGTCTGGAATAACAATTCAAACACGATGTCTGCAGAAATGGTAGCTTGCATTGCAATTGAGGCTATCTCTATATTAGAGAAGATGCACTCTAGAGGTTATGTGCATGGAGATGTAAAACCTGAGAATTTTTTGCTTGGCACCCCTGGAACTCCTGATGAGAAGAAGCTTTTTCTGGTTGATCTTGGATTAGCAACTCGTTGGCGGGATAGTTCGACTGGACTTCATGTTGAGTATGATCAACGTCCAGATGTATTTAGGGGAACAGTACGTTATGCTAGTGTACATGCACATCTTGGTAGAACAGGGAGCAGGAGAGATGATTTGGAATCTCTTGCTTATACTCTAATCTTCCTTCTTCGAGGCCGGCTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACCTCTCCAGAAGCTTTGTGTTGTGTTTGTCCTCCACCTTTTCGACAGTTTGTGGAGTATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAGTATATATCACTTTTTGATGGAATTGTTGGTCCAAATCCTGACATCAGACCCATAAATACTGATGGTGCACAAAAGCTTATATATCTGGTTGGACATAAGAGAGGGCGATTGATTGTGGAAGAAGACGAGGATGAACAACCAAATAAGAAGGTTAGAATGGGAATGCCAGCAATGCAATGGATTAGTGTGTACAATGCCCGCCGTCCGATGAAGCAAAGGTACCATTACAATGTTGCTGATGGGCGGCTGTTCCAACACATTGAGAAAGGATATGAGGATGGGTTATTTATCAGCAGTGTAGCTTGTTGTTCTAACCTTTGGGCCCTTATTATGGATGCTGGCACTGGATTTACTGCACAAGTTCATGAACTCTCACCCCACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAGAATTATTACATTAGTGCCATAGCAGGGTCTAATAATGGGAGCTCATTAGTTGTGATGTCTAAAGGGACCCAATATTTGCAACAATCCTATAAAGTCAGTGAATCATTTCCATTCAAGTGGATCAATAAAAAATGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCTGGGAGTAGATGGGCAATTGTAATGTCCCGTTGTGCCGGATTTTCAGACCAGGTTGTGGAACTTGATTTCCTGTATCCCAGCGAAGGCATTCATCGCAGGTGGGACAATGGTTACCGCATCACTTCAACTGCTGCCACATGGGACCAAGCTGCATTTGTTCTTAGTGTTCCAAGAAGAAAACTGTCCGATGAAACTCAAGAGACACTCCGCACATCTGCCTTTCCCAGCAGTCATGTCAAGGAAAAGTGGTCAAAGAATCTCTATATTGCATCTATATGTTATGGGAGAACAGTTTCATGA 2237 0.46 MPELRTGDNRTSRDPTRKTRTRRAAAGNNRSNLVRCEIGLEEKKEPQLLLQPLALSIRVFEEEEERVMDDEYDSGGGRSPDKAPAAEDEGSTAPIPERVQVGGSPLYKLDRKLGKGGFGQVYVGRRVGVGAGALEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSNTMSAEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGTPGTPDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCVCPPPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYLVGHKRGRLIVEEDEDEQPNKKVRMGMPAMQWISVYNARRPMKQRYHYNVADGRLFQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTAQVHELSPHFLHKEWIMEQWEKNYYISAIAGSNNGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWREGFYVTAMATAGSRWAIVMSRCAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKLSDETQETLRTSAFPSSHVKEKWSKNLYIASICYGRTVS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02112 667 ProSitePatterns Protein kinases ATP-binding region signature. 113 139 IPR017441 GO:0005524
Pste8g02112 667 Gene3D Transferase(Phosphotransferase) domain 1 81 391 - -
Pste8g02112 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Pste8g02112 667 PANTHER CASEIN KINASE-RELATED 107 635 - -
Pste8g02112 667 MobiDBLite consensus disorder prediction 65 101 - -
Pste8g02112 667 MobiDBLite consensus disorder prediction 1 29 - -
Pste8g02112 667 SUPERFAMILY Protein kinase-like (PK-like) 107 382 IPR011009 -
Pste8g02112 667 MobiDBLite consensus disorder prediction 1 21 - -
Pste8g02112 667 ProSiteProfiles Protein kinase domain profile. 107 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02112 667 MobiDBLite consensus disorder prediction 71 85 - -
Pste8g02112 667 Pfam Protein kinase domain 107 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02112 667 CDD STKc_CK1 107 376 - -
Pste8g02112 667 SMART serkin_6 107 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02112 667 FunFam casein kinase 1-like protein HD16 80 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02112 Pste-Chr8 18318088 18323618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02112 106 262 EF-hand Containing Proteins AT2G17290 30.675 6.95e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pste8g02112 Pkinase 9.9e-18 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02263 2 22841721 22846461 Pste8g02112 8 18318088 18323618 PCT