Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02093 CCTAGCTCTTGTTTCCTTATTGGAATTTCCTTTTTTTTTTAAATATTTTTTACTATTGCATTGCAATTTATCTGGTATATATTTTTAATAATAATAATAAATTTTTAATATTTTATTTCTTCTTCCGAGTTGTTCTCTTGTTCAGTTTGGCAGAAGACAGATCCCTATTTTCTGCTCTACTTCGTTCCATTGACATTCTCGTAACTTCGATTTCTTCCTCGTTTTCTGCAAACGTTGTTTCGATTTGCGACGCAGTTATGAGTTATAATTTATAATTTCCGTGTGACTCTGTTTCTGGAAAAAATATCTGTTCCATTCGGATTAGGGTTTATATTTGAAATTCAAAATCATTGGTGATTGATTGATGCGGAAGTCATTGTTGTGTTGTGAGGAATGATAATTAAGCGGAATTTGAAATCGCAAATGCCGAGTCTTAAGCGGCGGCGACTTGACGATGCTGCTGCGGCGGCGGAGGAAGACGGTGAGTGCGCCGCCGCGGCGGAGGGGAAGAAGAGGAAGACGAATGGGTACTACTACCCTCTGAATCTCTTTGCCGGCGTGATTCCGGCGAGTTTTCGTGGGCTGCTCGGCAAGCCGGAGAAGGACAGGCAGGTGGCGCCGAGCTTGCCAGCGGTGGCGGCTTGTTCTCGGCCGCCGCTGGTGCGGACTTCGAGGGGGCGGGTGCAGGCGCTGCCGTCGCGGTTCAATGATTCAGTAATTGAGGATTGGAGGAAGGACAGTAAGGAGGATAATGACAGGGATCAAGATAATGATAATGAATTTGATTATGAATATGAGAGTGTGAAGAAATCCAGAAAGGGAAAGAGTAATAACAAGGCTAGAGGGTATTCTGCATTGTGTGAGGTGGTCCTGCATAAGAATTTTGATGTTGCAAGCAAGGAATTTGGAGAATTGAGTTGCAATGAGAGGTTTTTGAAGGAGGAGAAGAAAGAGGAGGGGTTGTATGGACTAGAGGATTTTAATGCTGGGGATGTAGTGTGGGCCAAGGCAGGGAGGAAGGAACCTTTTTGGCCTGCCATTGTCATTGACCCTATGTGTCAGGCACCGGTGCTGGTTTTGAAGTCGTGTGTTCCGGGTGCTGCTTGTGTCATGTTTCTTGGGTACACTGAGAGTGAAAATCAAAGGGACTATGCGTGGGTCAAGTATGGGATGATTTTTCCGTTTATGGACCATGTAGACAGGGATGGTATTACTTGGATTAGGTTTCAGGGGCAGTCTGAATTGGGGTGCTATAATCCCTCTGAATTTCAAATGGCAATAGAGGAGGCATTTTTGGCAGATCTGGGCTTTACAGAGAAGTTAATAGCAGATATAAATACAGCAACCAGTAAGACTGAGTGTGGTGATTCTATACTGAAAGGAGTTCAGGAGGTCACTGGTTCAGACCACAATGCAGCCTGTCACTTTCTGAACATGGATTTATTTGATAAGAAGAAAGACATACAACCTTGTGAAGTCTGTGGATTGGAGCTTCCTTTCAAAATATCAAAGAAATCAAAGGATTTGACTCCTGGCAGCCAATTTCTATGTAAAACATGTGCTGGGTTAACAAAATCTAGACATTATTGTGGCATATGCAAGAAAATTTGGAATCACTCAGATAGTGGAAGTTGGGTGCGCTGTGATGGATGTAAAGTATGGGTGCATGCAGAATGTGACAAAATCACCAGCAACCTTTTCAAGAATGTTGGAGGATCTGATTACTTCTGTCCTACGTGCAAAATGAAGTTTGATTTTGAGTTATCTGATTCAGAAAAATCACAACCAAAAGTCAAATGGAAAAAAAACAATGGGCAGCTGGTGCTTCCAAACAAGGTCACTGTTCTCTGCAATGGTGTGGAAGGCATATATTTTCCTAGCCTTCAATTGTGGAAGAGTTTTGTGCAAGTGTGGTTTTGCGAGTCTAAAAAGCAAGCACTTAGAGAATGGGAATGGCACACAGGTTCCAAATTTAAAAATTGGAGGACAACTGTTCGGGTAAAAGGGTCGATGCTATCACTGGAAAAATGGATGCTGCAGTTGGCTGAGTTTCATGCTAATGCTGTAGTTTCTGTGAAACCTAAAAAACCTTCCTTAAAAGAAAGGAAGCAAAAGTTGCTTACCTTTCTACAAGAGAAGTATGAACCAGTTTGTGCTAAGTGGACTACAGAACGATGTGCTGTATGTAGATGGGTTGAAGATTGGGATTACAATAAAATCATAATTTGCAACAGATGTCAAATAGCCGTTCATCAAGAATGTTATGGAGCAAGGAATGTTCGAGATTTTACGTCGTGGGTTTGTAAAGCTTGTGAAACACCTGACATCAAGCGGGAATGTTGTCTTTGTCCAGTAAAGGGTGGTGCTCTAAAGCCAACCAATGTTGACAAATTATGGGTACATGTCACTTGTGCTTGGTTTCGACCTGAAGTATCTTTTGCTAGTGGTGAAAAGATGGAACCTGCATTGGGTATTCTGAGTATTCCTTCGAACTCTTTTGTGAAGATTTGTGTTATATGTAAGCAAATTCATGGTTCGTGCACACAATGTTGCAAGTGTTCTACTTATTTCCATGCCATGTGTGCATCAAGGGCCGGTTATCGCATGGAGTTGCATTGTATGGAGAAAAATGGAAAACAGACAACAAGAATGGTTTCTTATTGTGCTTACCACAGAGCTCCCAATCCAGACACTGTTTTGATTATGCAAACCCCTCTTGGAGTCATTTCAACCAAAAACCTTCTCCAAACGAAGAAAAAAGCTGGGTCAAGGTTAATTTCATCTAACAGAATAAAGGTTGAAGACACTTCTCCTGCAGAGCAAACTAGTCATGAGCCATGCTCTGCTGCTAGGTGTCGTGTATTTCAAAGAACAAATCATACAAAAAAGAGAGCAGCAGATGAAGCCATTGCTCATCATGTGGGGGGCCACTGCCATCATCCTCTTGATGCGATTCGAAGTTTAAATGCATACAGAGTTGTAGACAAGCCTCCTGCATTTTCTTCTTTCAGGGAACGTCTTCATCATTTACAGAGAACGGAAAATGAACGAGTTTGCTTTGGTAGATCAGGCATACATGGATGGGGACTGTTTGCTCGTCGAAATATTCAAGAAGGGGAAATGGTTCTTGAATATCGTGGTGAACAAGTGCGGCGCAGCATTGCTGATCTAAGGGAGGCACGCTATAGATTAGAAGGGAAAGACTGCTATCTTTTCAAGATAAGTGAAGAAGTGGTAGTAGATGCCACTGATAAAGGAAATATAGCACGGCTAATTAACCATTCTTGTATGCCCAATTGCTATGCAAGGATTATGAGTGTGGGTGATGATGAAAGCCGGATTGCACTCATTGCTAAGATTGATGTTTCTACTGGTGACGAGCTAACGTATGACTACTTGTTTGATCCTGATGAGCCAGATGAATTTAAAGTCCCTTGTTTATGTAAAGCACCAAACTGCAGGAAATTCATGAATTAAGATTTATTCAGATCTTGATGACTACTTTTGTCCGCAAGGAGCACTAACCCATCCCCTCATCAGTGGGAACCTCAGTTACACCCAAGCTGTAATTTTAATCAAAGCATAAGAAAAAAAGTATAGGGAAAATATTGTGGCATAGGTTTGCTTTTATCCTTCTAGTGCTTACTTAGATTTTTGCTATCATTTGACATTCGTCAAGCCTAATAAAATATATAGATTTAGCACTTTTTGACTCTTGGTGCC 3723 0.4161 MIIKRNLKSQMPSLKRRRLDDAAAAAEEDGECAAAAEGKKRKTNGYYYPLNLFAGVIPASFRGLLGKPEKDRQVAPSLPAVAACSRPPLVRTSRGRVQALPSRFNDSVIEDWRKDSKEDNDRDQDNDNEFDYEYESVKKSRKGKSNNKARGYSALCEVVLHKNFDVASKEFGELSCNERFLKEEKKEEGLYGLEDFNAGDVVWAKAGRKEPFWPAIVIDPMCQAPVLVLKSCVPGAACVMFLGYTESENQRDYAWVKYGMIFPFMDHVDRDGITWIRFQGQSELGCYNPSEFQMAIEEAFLADLGFTEKLIADINTATSKTECGDSILKGVQEVTGSDHNAACHFLNMDLFDKKKDIQPCEVCGLELPFKISKKSKDLTPGSQFLCKTCAGLTKSRHYCGICKKIWNHSDSGSWVRCDGCKVWVHAECDKITSNLFKNVGGSDYFCPTCKMKFDFELSDSEKSQPKVKWKKNNGQLVLPNKVTVLCNGVEGIYFPSLQLWKSFVQVWFCESKKQALREWEWHTGSKFKNWRTTVRVKGSMLSLEKWMLQLAEFHANAVVSVKPKKPSLKERKQKLLTFLQEKYEPVCAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVRDFTSWVCKACETPDIKRECCLCPVKGGALKPTNVDKLWVHVTCAWFRPEVSFASGEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHCMEKNGKQTTRMVSYCAYHRAPNPDTVLIMQTPLGVISTKNLLQTKKKAGSRLISSNRIKVEDTSPAEQTSHEPCSAARCRVFQRTNHTKKRAADEAIAHHVGGHCHHPLDAIRSLNAYRVVDKPPAFSSFRERLHHLQRTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLREARYRLEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIALIAKIDVSTGDELTYDYLFDPDEPDEFKVPCLCKAPNCRKFMN 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02093 1027 SUPERFAMILY Tudor/PWWP/MBT 195 300 - -
Pste8g02093 1027 ProSiteProfiles Zinc finger PHD-type profile. 396 452 IPR019787 -
Pste8g02093 1027 Pfam PHD-finger 607 641 - -
Pste8g02093 1027 Pfam SET domain 896 1001 IPR001214 GO:0005515
Pste8g02093 1027 PANTHER PHD FINGER PROTEINS 73 470 - -
Pste8g02093 1027 ProSiteProfiles Extended PHD (ePHD) domain profile. 646 761 IPR034732 -
Pste8g02093 1027 SUPERFAMILY SET domain 878 1024 IPR046341 -
Pste8g02093 1027 ProSiteProfiles Post-SET domain profile. 1011 1027 IPR003616 -
Pste8g02093 1027 SMART PHD_3 398 450 IPR001965 -
Pste8g02093 1027 SMART PHD_3 594 641 IPR001965 -
Pste8g02093 1027 SMART PHD_3 705 761 IPR001965 -
Pste8g02093 1027 SMART set_7 885 1008 IPR001214 GO:0005515
Pste8g02093 1027 Gene3D - 193 303 - -
Pste8g02093 1027 ProSiteProfiles Zinc finger PHD-type profile. 592 643 IPR019787 -
Pste8g02093 1027 CDD PHD_TCF19_like 399 449 - -
Pste8g02093 1027 Pfam PWWP domain 199 299 IPR000313 -
Pste8g02093 1027 CDD PWWP_AtATX3-like 197 308 - -
Pste8g02093 1027 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1027 IPR025780 -
Pste8g02093 1027 CDD PHD_ATX3_4_5_like 594 640 IPR042011 -
Pste8g02093 1027 SUPERFAMILY FYVE/PHD zinc finger 395 454 IPR011011 -
Pste8g02093 1027 Gene3D SET domain 777 1027 IPR046341 -
Pste8g02093 1027 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 392 454 IPR013083 -
Pste8g02093 1027 ProSiteProfiles PWWP domain profile. 198 267 IPR000313 -
Pste8g02093 1027 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 644 763 IPR013083 -
Pste8g02093 1027 SUPERFAMILY FYVE/PHD zinc finger 593 657 IPR011011 -
Pste8g02093 1027 CDD ePHD_ATX3_4_5_like 649 760 IPR041955 -
Pste8g02093 1027 FunFam Histone-lysine N-methyltransferase 644 763 - -
Pste8g02093 1027 FunFam Histone-lysine N-methyltransferase 859 1027 - -
Pste8g02093 1027 Pfam PHD-zinc-finger like domain 648 760 - -
Pste8g02093 1027 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 587 643 IPR013083 -
Pste8g02093 1027 FunFam Histone-lysine N-methyltransferase 582 643 - -
Pste8g02093 1027 ProSiteProfiles SET domain profile. 885 1002 IPR001214 GO:0005515
Pste8g02093 1027 SMART PostSET_3 1011 1027 IPR003616 -
Pste8g02093 1027 ProSitePatterns Zinc finger PHD-type signature. 595 640 IPR019786 -
Pste8g02093 1027 MobiDBLite consensus disorder prediction 115 136 - -
Pste8g02093 1027 Pfam PHD-finger 398 451 IPR019787 -
Pste8g02093 1027 CDD SET_SETD1-like 872 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02093 Pste-Chr8 17702785 17714379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02093 595 760 C2H2 Transcription Factor Family AT3G14740 33.908 2.93e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste8g02093 zf-HC5HC2H_2 2.4e-27 CL0390