Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02092 CACAAACCCCTTCTCTTCAACTCCCTCTCTCTCTCTCTCTCTCGTGTTTTGCTTCTTCTTTGTGACGGTGCATCTTTTTATTACTTGCTCTTACTTTGTGCAAGTGTTTTGTTTTGTGTATCTCATTATTAAAGCTTTGGTTTTTCAAGAAAAAGTGTGTGTTTTTTTTCTTGGGCTGAAAATGTTTGCAGAGACAGGACTTCTCTTCCCATATTTTCGAAATTTCTCTCAAGAGTTTCAACAGCTTGAGGAGTACTGCATGACACAGAAGTCCAATGATTCAATGAATGACCTTGCTCAATCTGCTTCTGCAATCTCAGAATATGATTTGTTTATAGAGGGAGATCTGTTCAAAGCACCTGAAACTATTCTCGAAGAACCAGCCACACACCTGGATCCAGTGCAAGCAGCCATCTCAATGATATCTTGTGGGGAGGATGTCTCCTCACAAGGTCTAAAATCATCAGATATTGATGTACTCCAAAATGAACAGCTTCTGAGTGAGGTATTCTATGAGTGCAAAAAGGATCTCTTAGAAAAGACAGTGATAGAGTCACCACTCTCTGATATTATGGAATTCAAGACTCTTAGCAATGGCAACAAGAACGTTGGTCAATCTCCCCGGGAGAGGCCTTTTCTTCTCAGCAACGCCAACTGCACTAGTGAGGAACGTCAAGAAAAGCTCTCCAGATATAGGAACAAAAAGAGTAAGAGAAATTTTGGGAGGAAAATTAAGTATGCTTGCAGGAAAGCGCTTGCTGACAGCCAACCCAGAATCCGTGGAAGATTTGCAAAGACAGAAGAGTTTGATGTCAAGAGGCTATGAATGCTAACAGACTCAGTTGGAAGAGAGAAAGTAGGAATATAGTGCTGTATCTCGTCAAGATGTTGGAAGAGCTATAGTGCGTGAAAACTATAGACTTGAAGGAGTTGTATAACTAGAACAAGTTTTGCTGAATGAATAAGGCAGAGACCTCAGACTCCTTAGGGTAGTTTGCCTCTACTCTGCTGTAGTAGCCTTCTTTGTAGAATGACCTTCAATGCATGTAAATAAGGTTTGTTGAATAAGTGAAGGAAAGTAGTTAAGGTTGTATCATGTTCATATTATATTATATGTTTACACTCTTATATGCCA 1135 0.3982 MFAETGLLFPYFRNFSQEFQQLEEYCMTQKSNDSMNDLAQSASAISEYDLFIEGDLFKAPETILEEPATHLDPVQAAISMISCGEDVSSQGLKSSDIDVLQNEQLLSEVFYECKKDLLEKTVIESPLSDIMEFKTLSNGNKNVGQSPRERPFLLSNANCTSEERQEKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDVKRL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02092 214 Pfam CCT motif 164 206 IPR010402 GO:0005515
Pste8g02092 214 ProSiteProfiles CCT domain profile. 164 206 IPR010402 GO:0005515
Pste8g02092 214 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 50 206 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02092 Pste-Chr8 17677752 17682424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02092 131 208 C2C2-CO-like Transcription Factor Family AT5G57660 38.750 5.99e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste8g02092 CCT 1e-17 CL0281