Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02088 TTATTTTTATGGTGAGAGTTTCATTCACCCCAAAGGTGACATGCTAACTGTGCAGCTGGGGTGTGCTGCAAGTGTAGTGTTTCTAAACTGTAGTAATCCAGTGATTGATGATCCTCAATATGTGCAAGTGAATTCCGGTGGTTGTGATTCCGGGGGCCATATCTATGCCATTCTGGGTCGCTGTCGTGAACATATTCAGGAATTTACACTAGCAGACATCAAAGTTGGGTGTCGTTCAAAGGTTGCTACCTTAGCAAACTTGGAAGAACATGACACTGATGACAGGAACATGTCCTATGCTTACATTCACAAGTTGTTGGAAGAGGGATTTTGGTTGTCTTGGTTACCACTTATTTGTAAGCATCGATGTGGAAACAACAGACGCGGTACCTATTGCTCTATCAATGAAACCACACAACAATTTCAATGTCAACAACATGGATATTGCCAACTCTTGGAACATGATTCCACTAATTGTGGTGAGAATATATTTCATCCTTCCCATTTTTTATCTCAATTTCTCTTGTTGCCACTAATCATGTCCTCACATAATAGCGTATTGAATTTTCTTAGTATTTTATTGAAATTTATCTTCACAGAATTTGTCAAAAGAATAAGACATATTAAGCGACCACTATCATATTCAAGATATTATAAAGAAGATCTCATTGGACAAGACATTCTACCAATATTTGTGGCAGCTAGATATCTATTTGGAGTCGCACTTTTGCTTGGACTGTTTATTTATATGTGGCGAAGAAGACATTTCTCAATGTACGAAAACATTGAAAACTTTTTGCTAGACAACCATCTTAATCCCATTCGGTACGAATATGCAGACATCAAGAAAATTACTAGAGGTTTCAAAGAGAAATTGGGTCAAGGTGGATTTGGCTGTGTATATAAAGGAAAGCTTAGAAGTGGGTTGAATGTAGCAATAAAAATGTTGAATAAATCCAAAGGCAATGGACAAGAATTTGTAAATGAAGTATCTACCATAGCAAGGATACATCATGTGAATATAGTGCGTCTTATTGGATATTGTGTTGAAAGAAAAAGATGTGTTTTAATTTATGAGTACATGTCCAATGGATCATTGGATAAATACATTTTCTCAAAAGAAAGAAGTGTCCCTTTAAGTTATGAGAAAACATATGAAATATCTTTTGGAATAGCTTGTCGGATTGAATATCTACATCAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAACCTCATAATATTCTTTTAGATGATAACTTTGTTCCAAAAGTTGAAGATTTTGGACTTGCAAAGCTATATCCTGTGAAAGACAGATCTGTTGTTTTAACAGCAGCAAGAGGAACATTGGGTTACATGGCTCCAGAACTATTCTACCAAAATATAGGTGGAGTTTCATATAAGGTTGATGTCTTTAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAGTCCTCATGTAAAACATTCAAGCCAACATTACTTTCCATTTTGGATCTATGATCAATTTAAAGAAGAAAATGATATTGACATGCAAGATGCCTCACAAGAGGATAAGATTCTAGTGAAAAAATGGTTCATAATTGCACTTTGGTGTATACAATTGAAACAA 1630 0.3528 MLTVQLGCAASVVFLNCSNPVIDDPQYVQVNSGGCDSGGHIYAILGRCREHIQEFTLADIKVGCRSKVATLANLEEHDTDDRNMSYAYIHKLLEEGFWLSWLPLICKHRCGNNRRGTYCSINETTQQFQCQQHGYCQLLEHDSTNCGENIFHPSHFLSQFLLLPLIMSSHNSVLNFLSILLKFIFTEFVKRIRHIKRPLSYSRYYKEDLIGQDILPIFVAARYLFGVALLLGLFIYMWRRRHFSMYENIENFLLDNHLNPIRYEYADIKKITRGFKEKLGQGGFGCVYKGKLRSGLNVAIKMLNKSKGNGQEFVNEVSTIARIHHVNIVRLIGYCVERKRCVLIYEYMSNGSLDKYIFSKERSVPLSYEKTYEISFGIACRIEYLHQGCDMQILHFDIKPHNILLDDNFVPKVEDFGLAKLYPVKDRSVVLTAARGTLGYMAPELFYQNIGGVSYKVDVFSFGMLLMEMGSRRRNSSPHVKHSSQHYFPFWIYDQFKEENDIDMQDASQEDKILVKKWFIIALWCIQLKQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02088 530 PANTHER RUST RESISTANCE KINASE LR10-RELATED 246 529 IPR045874 GO:0004672
Pste8g02088 530 Gene3D Phosphorylase Kinase; domain 1 250 347 - -
Pste8g02088 530 SMART serkin_6 273 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02088 530 Gene3D Transferase(Phosphotransferase) domain 1 348 530 - -
Pste8g02088 530 FunFam Os07g0541700 protein 348 437 - -
Pste8g02088 530 ProSiteProfiles Protein kinase domain profile. 273 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02088 530 SUPERFAMILY Protein kinase-like (PK-like) 259 528 IPR011009 -
Pste8g02088 530 FunFam serine/threonine-protein kinase PBS1-like 244 347 - -
Pste8g02088 530 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Pste8g02088 530 Pfam Protein kinase domain 276 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02088 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02088 Pste-Chr8 17586510 17589167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02088 262 528 Receptor kinase-like Gene Family AT5G38280 47.059 4.26e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste8g02088 Pkinase 2.5e-44 CL0016