Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02087 ATGTTCAATTTTCAGAAATTGTCTCTTCTATTACTCACGTTGGTGTTTCTATTACTCAAGCCTGTGATAGGCAAGAACCACTGCACGGATAAATGTGGAAACATTCATATTCAGTTTCCATTTTATCTTAGAGACAGCACACTGAATCACACCACAGGCTATCCCCTAGGCTTTGCTGTGTTATGTACCCCAAAAGAAGAGACTGTGCTGGAGCTTCCTTCTGTTCCAACAAAATTGTTTGTCAGAAACATTGATTACAAATATCATCGAATTGAAATATATGACCCTGAAAATTGCCTTCCCAATCTGCTGTTGAAACTCGGCAACGCATCCGTTTCCCCGTTTCAGTTCTGGCCAATTGAAGATTTTGAGAAAAACATTTCCTTCTTCCGATGTGATTCAATGTTGTCGTGTCCTATTTTGCCACTTAAATCCTACATAGATGTTACTATCACTGAAATACTATCCTGCACCAAAGTGAAAGATGTTTTGTTCGTTGAGTGGTATTATTCATATGTGTTTTACAACAAGGTGCTTATGGAATGGCCGAAATCTAACTGTAGTTACTGTGAAGCACAAGGACAGAAATGTAAATGGAAGAACGGTACCAACGGTGAAACTGAATGTTTCGTGTGCTCAACAAAACAGATTTCCTCATCAACTATAATAACTATTGCTGTAGGTGGAATACTTGGTTTGATTCTCTTACCCTTGCTGGTGAAGGCATTGTTTCATCTATTTGGTTATTATAAGATGAAAGAAGAAGACCAAGCTCGGATTGAGAAATTCTTGGAGGATTACAAAGCAATGAAGCCTACTAGATTCACTTATGCAGACATTAAGAGAATCACAAATGGGTTTAGTGAAAGCTTAGGAGAAGGAGCTCATGGAACAGTGTTCAAAGGAATGATCTCTCAAGATATTGTTGTTGCTGTGAAGATACTCAAGGATGCAGTGGGAGATGGGAAGGATTTCATAAATGAAGTAGGAACCATTGGAAAAATTCATCATGTTAACATTGTTCGCTTGCTTGGATTTTGTGCAGATGGATTCCAGCGTGCCCTTGTCTATGATTTTTTTCCAAATGGGCCATTGCAGAGATTCTTGGTTCCACCAGATAACAAGGATGTTTTCCTAGGTTGGGAGAAGTTACAACAAATTGCTCTTGGTATTGCTAGAGGAGTTGAGTATCTCCACCTTGGTTGTGATCATCGAATACTTCACTTTGATATCAATCCTCACAATGTTTTGCTAGATGAGCACTTTGTCCCAAAAATCACTGATTTTGGTCTTTCCAAATTGTGTCCCAAAAATCAAAGCACAGTGTCTATGACTGCAGCAAGGGGAACCTTGGGCTACATTGCTCCTGAAGTTTTCTCAAGAAACTTTGGTAACGTGTCTTACAAGTCTGACATTTATAGTTATGGAATGTTGCTTCTAGAGATGGTTGGAGGAAGAAAGAATACAAATGTTCCAACTGAGGAAAGTTTTCAAATTTTATACCCTGAATGGATCCATAATTTGTTGGAAGGTAGAGATATTCAAATTAGTGTTGATGACGAGGGAGATGTTAAAATTGTCATGAAACTTGCCATTATAGGCCTTTGGTGCATTCAATGGAACCCAGTAGACCGTCCATCCATGAAAAGTGTGGTACATATGCTTGAAGGGGATGGAGATGAGTTAATTGCACCCCCTACTCTATTTGACATCTCTGGTTCTTCTAGAACAAATGTTGACGTTCCAACAAGACGTCAAAATTTTGAGTTGGAAGTTATTCATGAAATAGGAGAGTAA 1797 0.3873 MFNFQKLSLLLLTLVFLLLKPVIGKNHCTDKCGNIHIQFPFYLRDSTLNHTTGYPLGFAVLCTPKEETVLELPSVPTKLFVRNIDYKYHRIEIYDPENCLPNLLLKLGNASVSPFQFWPIEDFEKNISFFRCDSMLSCPILPLKSYIDVTITEILSCTKVKDVLFVEWYYSYVFYNKVLMEWPKSNCSYCEAQGQKCKWKNGTNGETECFVCSTKQISSSTIITIAVGGILGLILLPLLVKALFHLFGYYKMKEEDQARIEKFLEDYKAMKPTRFTYADIKRITNGFSESLGEGAHGTVFKGMISQDIVVAVKILKDAVGDGKDFINEVGTIGKIHHVNIVRLLGFCADGFQRALVYDFFPNGPLQRFLVPPDNKDVFLGWEKLQQIALGIARGVEYLHLGCDHRILHFDINPHNVLLDEHFVPKITDFGLSKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVPTEESFQILYPEWIHNLLEGRDIQISVDDEGDVKIVMKLAIIGLWCIQWNPVDRPSMKSVVHMLEGDGDELIAPPTLFDISGSSRTNVDVPTRRQNFELEVIHEIGE 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02087 598 Gene3D Transferase(Phosphotransferase) domain 1 360 562 - -
Pste8g02087 598 SUPERFAMILY Protein kinase-like (PK-like) 268 556 IPR011009 -
Pste8g02087 598 FunFam PR5-like receptor kinase 360 565 - -
Pste8g02087 598 Pfam Wall-associated receptor kinase galacturonan-binding 28 95 IPR025287 GO:0030247
Pste8g02087 598 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
Pste8g02087 598 Gene3D Phosphorylase Kinase; domain 1 258 359 - -
Pste8g02087 598 Pfam Protein kinase domain 289 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02087 598 FunFam serine/threonine-protein kinase PBS1-like 252 359 - -
Pste8g02087 598 PANTHER RUST RESISTANCE KINASE LR10-RELATED 256 568 IPR045874 GO:0004672
Pste8g02087 598 ProSiteProfiles Protein kinase domain profile. 285 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02087 Pste-Chr8 17584024 17586048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02087 185 566 Receptor kinase-like Gene Family AT1G66910 41.769 8.14e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste8g02087 Pkinase 3.9e-42 CL0016