Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02085 ATAATAATGAGTGTCTCATCTTCCTCCCGCTGCCGACTGCTATCAGTGGTTGCTTTCGGGATTTTCACTGTTATTCTGTCGAGTTTTGCTGCCTTCAATCCATGGAGTGGTGGCAAAGATCCCAAAACCTGTTATTCTTCATGCGGCAAAATTGGCAACATAACATATCCATTTAGACTGAAAAACGACGATGGCCATTGTGGTCTTCCAAGCTTCGAATTAGAGTGTGTGAACAATATGACAACGTTAACTCTTTTTGCAGGAAAATACTATGTTAAGGATATCAATTACGAGCGATACCAGATCCAAGTGATTGATGCTGGTGTTGTGGAAGACACTGCTTGCTCCATTCCTTGGAATCACTTAACCCAAAAGAATTTCGATTCCAGGTTTAGTGTTCCGTTAACTGGAGAGAATTTTTATATCAATGGTAGTGATGCCCTGACCCTGCAGGTGGATCCCTACTATTCAAAAAGTGTAGTGTTTCTAAACTGCAGTGATGCAGTGAGTGAAGATCCTCGATATGTGGAAGTGAATGCCGGTGGTTGTAATTCCGGAAGCCATATATATGCTGTTATGCATGGCCTTACAGTGATGGACATCAAGGTTGGGTGTCGTGTAAAGGTTATTACCTTAGCAAACATGACACATGACAGGAACGTTTCTTATGCTTCAATCCGGAAGAGGTTGAAAGATGGATTTTGGTTGTCTTGGTTATCACTTATTTGTTCTCATGAATGCCAAACCACATCCGGTATGTTTTGCTCTGTCAATCAAACCACACTACAAATGGAATGTAAACAACCGGGATACTGCTCCTTCCGGGATACCTGGAACAAACATAGCCAGTATTGTGAACCCATAGGACCAAGAATTCTTGGAGATATACTACGTTATGTTAAAGAAGTTATAAAAGAATTTGTCAAAAGAATAAGAGATATCAAGCGACCATTATCATACTCACATTATTACGAAGAAGATTTCATAGGACAAGATGTTCTGCCAATATTTTTGGTAGCTAGATATCTATTTGGAGTTGCACTTTTGCTAGGTATAATTATTTACATGTGGCGAAGAAGACATTTCTCTGTGTATGAAAACATTGAAAACTTTTTGCTAGAGAATCAGCTAAATCCAATTAGATATGAATATAGAGAAATAAAGAAAATGACCAAAGGTTTCAAAGTGAAATTAGGTCAAGGTGGTTTTGGGTCTGTGTACAAAGGAAAGCTTACAAGCGGGTTAGATGTAGCAATAAAGATGTTGAACAAAACCAAAGATAATGGACAAGAATTTGTAAGTGAAGTAGTTACCATAGGAAGAATACATCACGTTAATGTAGTAGGTCTTATTGGATATTGTGTTGAAGGCAAAAGGTATGCTTTAGTTTATGAATACATGTCTAATGGATCTTTGGATAAATACGTTTTCTCTAAAGAAGGATGTCTCCCTTTAAATTATGAGAAAACATATGAAATAGCTCTTGGAATAGCTTGTGGGATAGAATATCTACATCGAGGTTGTGATATGCAAATTTTACATTTTGATATCAAACCTCATAATATTCTTTTAGATGATAACTTTACCCCAAAGGTTTCAGATTTTGGTCTCGCAAAGTTATATCCAGTGAAAGACGGATCTGTTGTTTTAACTACAGTAAGAGGAACATTAGGTTACATGGGTCCAGAACTATTCTACAAAAATATAGGTGGGGTTTCATATAAAGCTGATGTCTATAGTTTTGGAATGCTCTTAATGGAAATGGGAAGTAGGAGAAGAAACTCAAATCCTTATGCTGAGAATTCAAGCCAAAATTACTTCCCATTTTGGGTCTATGATCAATTTAAAGAAGAAAAAGATATTGAAATGGAAGATGTCTCAAAAGATGATCAAATTCTAGTTAAAAAAATATTCATAGTTGCACTTTGGTGTATCCAATTGAAACCAAATGATCGACCTTCCATGAAGAATGTTGTAGAAATGCTTGAAGGAAATTATGAAAGGCTTACAATGCCTCCAAAGCCTTCTTTTTATCCTTATGACCCAATTGGACAAGATGGTGGAATCACCTTTGACCAAACATCATGCAGTGATTTAACTAGTTCTAAAAATAATATTTGCAAAACTACATCCAAAACGTATTTTGGTTATAAAGATGACATGATAATATTGTTGTCTCCAGCAAATAATAAGGATGCTCTCCTTGGTTGGGAGAAATTGCCAAAGGAGTTGAGTATCTCAATTTTCCTTCTAATGAAAGTTGCTTCCAGTGATGATTGGAGGAATCAAAATACAAATATTTTAACAATTATACCTAAATGGATTCATAGTTTGTTGAAAGGTAGAAATATTCAAATTAGGGTTCAATACGAGGAATATGTTAAAATTGCTAAGAAACTTGTCATTATAAAACTTTAG 2418 0.3577 IIMSVSSSSRCRLLSVVAFGIFTVILSSFAAFNPWSGGKDPKTCYSSCGKIGNITYPFRLKNDDGHCGLPSFELECVNNMTTLTLFAGKYYVKDINYERYQIQVIDAGVVEDTACSIPWNHLTQKNFDSRFSVPLTGENFYINGSDALTLQVDPYYSKSVVFLNCSDAVSEDPRYVEVNAGGCNSGSHIYAVMHGLTVMDIKVGCRVKVITLANMTHDRNVSYASIRKRLKDGFWLSWLSLICSHECQTTSGMFCSVNQTTLQMECKQPGYCSFRDTWNKHSQYCEPIGPRILGDILRYVKEVIKEFVKRIRDIKRPLSYSHYYEEDFIGQDVLPIFLVARYLFGVALLLGIIIYMWRRRHFSVYENIENFLLENQLNPIRYEYREIKKMTKGFKVKLGQGGFGSVYKGKLTSGLDVAIKMLNKTKDNGQEFVSEVVTIGRIHHVNVVGLIGYCVEGKRYALVYEYMSNGSLDKYVFSKEGCLPLNYEKTYEIALGIACGIEYLHRGCDMQILHFDIKPHNILLDDNFTPKVSDFGLAKLYPVKDGSVVLTTVRGTLGYMGPELFYKNIGGVSYKADVYSFGMLLMEMGSRRRNSNPYAENSSQNYFPFWVYDQFKEEKDIEMEDVSKDDQILVKKIFIVALWCIQLKPNDRPSMKNVVEMLEGNYERLTMPPKPSFYPYDPIGQDGGITFDQTSCSDLTSSKNNICKTTSKTYFGYKDDMIILLSPANNKDALLGWEKLPKELSISIFLLMKVASSDDWRNQNTNILTIIPKWIHSLLKGRNIQIRVQYEEYVKIAKKLVIIKL 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02085 805 Pfam Wall-associated receptor kinase galacturonan-binding 44 106 IPR025287 GO:0030247
Pste8g02085 805 PANTHER RUST RESISTANCE KINASE LR10-RELATED 365 683 IPR045874 GO:0004672
Pste8g02085 805 FunFam PR5-like receptor kinase 467 674 - -
Pste8g02085 805 Gene3D Transferase(Phosphotransferase) domain 1 467 671 - -
Pste8g02085 805 Gene3D Phosphorylase Kinase; domain 1 368 466 - -
Pste8g02085 805 ProSiteProfiles Protein kinase domain profile. 392 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02085 805 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524
Pste8g02085 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Pste8g02085 805 SUPERFAMILY Protein kinase-like (PK-like) 377 663 IPR011009 -
Pste8g02085 805 SMART serkin_6 392 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02085 805 Pfam Protein tyrosine and serine/threonine kinase 395 662 IPR001245 GO:0004672|GO:0006468
Pste8g02085 805 FunFam serine/threonine-protein kinase PBS1-like 363 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02085 Pste-Chr8 17544009 17548800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02085 48 685 Receptor kinase-like Gene Family AT5G38260 33.385 1.08e-101 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste8g02085 PK_Tyr_Ser-Thr 2.4e-45 CL0016