Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02084 CGCAAGCGCAGAACAAAATGACCATAATAGCAAAAAGTCCGTCAACGCGGAATCGCGGTTGCATTTACACGGCGCAACTGTAATCGTTCTGCTTTGCGCACACTTTCGAGATAATCTCACTCTTGAAGCTGCCAAACAATGCTCAACTTTCACAGTTTCTGTCTCCTAGTAACGGTGTCGTTTCTGCTACTGAACCCAGCGGCATGCAAGAAAGGGTGCACGGAAAAGTGTGGACGCGTGCACATCCAATTTCCGTTTCACCTGAGAAACACTAAGGTGAACCACACCAATTCCTACCCTCTCGGGTTCGATCTGGTGTGTACGGATGCAGGCGAGACCATGCTGGACCTCCCTTATGTTCCGGTTAAACTGTTCGTCAAAAAAATCGATTACAAGACGCAGCAAATCATAATCTACGACCCTCAGAGTTGTCTTGCAAGAGAACTCATAAAGCTTGGCAATTCATCTGTTTCTCCATTTCAATTTCGACAATTTGGTGCGAGCAACAATGTTTCGTTCTTCAGCTGCAACTCAATGACGTGCCCAATTGTGCAACTGGAATCTCAAGTTGACTTTGTTGATCCTATGATAGTGTCTTGCACTAAGGTCAGTGATGTGTTGTCTGTCATGTGGCTTGTGCAGGATGAGTCCGTGGTTATGGAATGGTCCACTCCTGATTGTAGTTCCTGTGCAGCACAAGGGCAAAATTGTCAATACAAGAATGGTTCCCAAAGTGAGATTGAATGTCTTTTATGCCCAACAAATAAGATTCCAACATCAATTATTCTACTCATTGCTGCAGGAGGAATAGTTGGTTTGATTCTTTTGCTGCTACTCGTCAAGGGATTGTTTCTTGTGTATGAGCATTACAAAATGAAGGGGGAGGACCACGCTCGGATTGAGAAATTCTTGGAGGATTATAGGGCAATGAAGCCTACTAGATTCACTTATGCTGACATTAAGAGGATCACAAATGGGTTTAGTGAAAGTTTAGGGGAAGGAGCTCATGGAGCAGTGTTTAAAGGAATGCTTTCCAAAGAGATTCTTGTTGCTGTGAAGATACTCAATGACACGGTGGGAGATGGAAAGGATTTCATAAATGAAGTGGGAACCATGGGTAAAATTCACCATGTTAATGTTGTTCGATTGCTTGGATTCTGTGCAGATGGATTCCATCGTGCTCTTGTCTATGATTTCTTCCCAAATGGATCATTGCAGAGATTCTTGGCTCCACCGGATAACAAGGATGTTTTTCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCTAGAGGGATTGAGTATCTCCATCTTGGTTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTAATAGATGACCATTTTAGTCCAAAAATAACTGATTTTGGACTTGCCAAGTTATGTCCCAAAAATCAGAGTACAGTTTCTATGACTGCAGCTAGGGGAACATTGGGATACATTGCTCCTGAAGTTTTCTCTAGGAACTTTGGTAATGTGTCTTATAAATCTGACATTTATAGTTATGGAATGTTACTCCTAGAGATGGTGGGAGGAAGAAAGAATACAAATATGTCAGCAGAGGAAAATTTCCAAGTTTTGTATCCTGAATGGATCCATAATTTGCTAGAAGGCAAAGATGTGCAAGTTACTATTGAAGAGGAGGGAGATGTTAAAATTGCAAAGAAACTTGCCATTATAGGACTTTGGTGCATTCAGTGGAACCCAATAGATCGTCCATCCATGAAAATTGTGGTTCAAATGCTTGAAGGAGATGGAGAGAAGTTAATTGCACCTCCTACTCCTTTTGATAAGACTAGTTCTTCAGGAACAAGTGCAACTGGAGCAAGACGTCAAAATTTTGAGTTGGAAATTATTCATGAAATAGAAGAGTAAATAAAGTCTTACTTTTAGGTTTTCTTCAAATGTAATAGTGTATTTTAAAGAAATTCTAACACCTAAGTTTGTTACTATTGTAAGCTTATTAATTTACTTTTTTTTTTTATAATTTCTTATATTATGCTTCATCAAGTTCTTATTTGAGTATGAGATACTCAAAATTTTA 2083 0.3985 MLNFHSFCLLVTVSFLLLNPAACKKGCTEKCGRVHIQFPFHLRNTKVNHTNSYPLGFDLVCTDAGETMLDLPYVPVKLFVKKIDYKTQQIIIYDPQSCLARELIKLGNSSVSPFQFRQFGASNNVSFFSCNSMTCPIVQLESQVDFVDPMIVSCTKVSDVLSVMWLVQDESVVMEWSTPDCSSCAAQGQNCQYKNGSQSEIECLLCPTNKIPTSIILLIAAGGIVGLILLLLLVKGLFLVYEHYKMKGEDHARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGMLSKEILVAVKILNDTVGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDNKDVFLGWEKLQQIALGVARGIEYLHLGCDHRILHFDINPHNVLIDDHFSPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSAEENFQVLYPEWIHNLLEGKDVQVTIEEEGDVKIAKKLAIIGLWCIQWNPIDRPSMKIVVQMLEGDGEKLIAPPTPFDKTSSSGTSATGARRQNFELEIIHEIEE 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02084 591 Gene3D Phosphorylase Kinase; domain 1 253 353 - -
Pste8g02084 591 ProSiteProfiles Protein kinase domain profile. 279 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02084 591 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Pste8g02084 591 Pfam Protein kinase domain 283 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02084 591 Gene3D Transferase(Phosphotransferase) domain 1 354 557 - -
Pste8g02084 591 FunFam serine/threonine-protein kinase PBS1-like 247 353 - -
Pste8g02084 591 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Pste8g02084 591 PANTHER RUST RESISTANCE KINASE LR10-RELATED 250 567 IPR045874 GO:0004672
Pste8g02084 591 FunFam PR5-like receptor kinase 354 559 - -
Pste8g02084 591 SUPERFAMILY Protein kinase-like (PK-like) 261 550 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02084 Pste-Chr8 17461740 17464034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02084 180 562 Receptor kinase-like Gene Family AT1G66910 42.716 4.28e-104 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste8g02084 Pkinase 1.1e-43 CL0016