Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02082 ATACTCACACCAATAAAATCAAGGGTCATTGAGGAGTGATAAGAAATTAAATTCTCTACAAAATTAATGTTTCTGAAGCTTTTCTTCTCTCAGGAAGCAGAGCAAAGTGTTAAATTCAAATCCACGATGAAAATCGCAGCAACAGCCATCACAATTGTTCTATTCCTACAAACTTGTGCAGCTTTGCGTGTTTCCAATTGTGCTGCTTCCTCATGCGGCAACGTTCCCAACATAAGTTACCCCTTTCGACTCAGAGAAGACCCACCTCGTTGCGGCGACAAGAGGTACGAGATAGATTGCGAGAACAACGCAACGGTTCTGACTCTGTTTTCGGGGAAATACAACGTACACGAAATCGATTATGCGAGGTTCAGAATCCGAGTGAGTGATGCGGGTGTTGTGGGAAACGCTACTTGTTTCTCCATGCCCCGTTATTTCTTATACTCTCGCAATTTCAGTTTCGCTTATTTGGGTCCTGGACCGGATCCGTTGAAGCTGGACCGATCCGTTACAACCTCGTCAATAGCGTATCTCAACTGTGTTGATTCTATCACTGATGACTCTAGATATGTTCCTGCGAATACCCCTTGCTGTGCCTCCGAAGCCATCCAAAGGTCCTGCTCTGAAAGACACGTGTACGCTGTTGTTAGAGATTCGACACATGATTTTTCGGTGAAGGACGTGAAGGTTGGGTGCGAACTGAAAGTGGCTACTTATGCGAATTCGGGAACTGTCAAAAACAATGTTTCCTACGGAAAAATCCACGAAATGCTTTTAAACGGATTTTGGCTCTCTTGGTTATACGTTGTTTGTGAAGATCGATGCGGAAAGGGAATGGATTGCAGTGTTGTTGATGAATCCACCGGTGAAGTTCGATGTAGTGAGGCGTTAGACATGTCGGGTTGCCGTTATGTCTACGGTGGAAACAACCAAATCACGGTGGACTGCGGTGACGATTTCGATTACTCTTTGTTTATTTTTCTTTTGTTTAGTGCATCTCCATTCATTTGCATTTTGATGTGTTTCATTGGTAATTTCTGTTTGATTATTGAGTTTGAAGGTGGTAAGGGAAACATTATTGTAAACATGGGATTCATGAAAATTTTTGGCTTGAATAGAGCTATGTCATATGATGAAAAGGAAGTTGAAATAGGAAAAGGCATAGGAAGGTATGTCCTACCATACTTTATAATAAGATTTTCATTTGGTTTGGTAGCTTTCGTTGTGCTGTTGGTATGTAAATGGGGAAGAAGACATAAATCAAAATATGAAAATATTGAAGTGTTTTTGGAAGGAAACACCCTCATGCCAATTAGATACTCATACAAAGAATTAAAGCACATGACTAGTGGTTTCAAGGAAAAGTTAGGGCAAGGAGGATTTGGTTTGGTATATAAAGGAAAGTTACGCAGTGGATCATTGGTAGCAGTAAAGATGTTGACTAAATCAAAGGATAATGGGGAAGAATTCATTAGTGAAGTTGCAACTATTGGAAGAATACATCATATGAATGTGGTTAGACTTATTGGATTTTGTGTTGAGGAATCAAATCGTGCTCTTGTTTATGAATTCATGTCCAACGGATCTCTTGATAAACATATTTTCTCAAAGCAAGATAGTATCTTGCTAACTGACAATCAAATATATGAGATATCTCTTGGAGTGGCTAATGGTATTTCTTATTTGCATCAAGGTTGTGAGATGCAAATTTTGCATTTTGATATCAAGCCACATAACATCCTTCTTGATGAGAACTTTATTCCAAAGGTTTCAGACTTTGGCTTGGCAAAACTTTATCCTATAAACAAAAGCAATGTCACATTAACTGCAATAAGGGGAACAATTGGATACATGGCCCCTGAGTTATTCTACAATAATATAGGGGGAGTATCGTATAAAGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGACAAATAGGAGAAGAAATTTGAATCCACATGTAGATCACTCAAGTGAACTTTTCTTTCCTCTTTGGATACATGATCATTTGAATGGAGAAAATGCGATAGAAACAAAAGATATTACAAAGGAGGAAAATAATAATAAAACAAAGAAAATGCTTTTAACAGCATTATGGTGTATACAATTGAAACCAAGTGATCGTCCTTCAATGAACAAAGTGGTTGAGATGTTAGAAGGAGAACTTGAGAACATTGAAATGCCTCCAAAACCCACCTTATATCCACATGAAATGATTCAAAAGGATAGCAAAAACAAATTAAACCAAAGTCTTTCAAATGATTATGATGGATCTTCAAACTATTTGGAGGAAAGTAATATTCATAGTTACTTAGAGTCTTCTTCTTAATATTTGTAATTTACGTTTATGTAATGTAAGAACCAAATTTCTATCAAGG 2386 0.3764 MFLKLFFSQEAEQSVKFKSTMKIAATAITIVLFLQTCAALRVSNCAASSCGNVPNISYPFRLREDPPRCGDKRYEIDCENNATVLTLFSGKYNVHEIDYARFRIRVSDAGVVGNATCFSMPRYFLYSRNFSFAYLGPGPDPLKLDRSVTTSSIAYLNCVDSITDDSRYVPANTPCCASEAIQRSCSERHVYAVVRDSTHDFSVKDVKVGCELKVATYANSGTVKNNVSYGKIHEMLLNGFWLSWLYVVCEDRCGKGMDCSVVDESTGEVRCSEALDMSGCRYVYGGNNQITVDCGDDFDYSLFIFLLFSASPFICILMCFIGNFCLIIEFEGGKGNIIVNMGFMKIFGLNRAMSYDEKEVEIGKGIGRYVLPYFIIRFSFGLVAFVVLLVCKWGRRHKSKYENIEVFLEGNTLMPIRYSYKELKHMTSGFKEKLGQGGFGLVYKGKLRSGSLVAVKMLTKSKDNGEEFISEVATIGRIHHMNVVRLIGFCVEESNRALVYEFMSNGSLDKHIFSKQDSILLTDNQIYEISLGVANGISYLHQGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPINKSNVTLTAIRGTIGYMAPELFYNNIGGVSYKADVYSFGMLLMEMTNRRRNLNPHVDHSSELFFPLWIHDHLNGENAIETKDITKEENNNKTKKMLLTALWCIQLKPSDRPSMNKVVEMLEGELENIEMPPKPTLYPHEMIQKDSKNKLNQSLSNDYDGSSNYLEESNIHSYLESSS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02082 756 MobiDBLite consensus disorder prediction 725 744 - -
Pste8g02082 756 PANTHER RUST RESISTANCE KINASE LR10-RELATED 400 722 IPR045874 GO:0004672
Pste8g02082 756 Gene3D Transferase(Phosphotransferase) domain 1 503 709 - -
Pste8g02082 756 FunFam PR5-like receptor kinase 503 711 - -
Pste8g02082 756 ProSitePatterns Protein kinases ATP-binding region signature. 434 456 IPR017441 GO:0005524
Pste8g02082 756 SUPERFAMILY Protein kinase-like (PK-like) 413 700 IPR011009 -
Pste8g02082 756 FunFam serine/threonine-protein kinase PBS1-like 396 502 - -
Pste8g02082 756 Gene3D Phosphorylase Kinase; domain 1 405 502 - -
Pste8g02082 756 SMART serkin_6 428 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02082 756 Pfam Wall-associated receptor kinase galacturonan-binding 45 108 IPR025287 GO:0030247
Pste8g02082 756 ProSiteProfiles Protein kinase domain profile. 428 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02082 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Pste8g02082 756 MobiDBLite consensus disorder prediction 722 744 - -
Pste8g02082 756 Pfam Protein kinase domain 431 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02082 Pste-Chr8 17427189 17433760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02082 382 731 Receptor kinase-like Gene Family AT4G18250 45.531 1.80e-94 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste8g02082 Pkinase 7.1e-50 CL0016