Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02081 TTCACCCAACATCGGTGCTCCACGTACCCACCTTATAATCTCAGCCGTCCACGTCTTTCTCACTAAAATCCAACTCACTGCTCTTTAAATATCCACCTGTTACCCGCATCACACCCTCCCTTTCAAATCAACGGTCCACGTTATGCGCCTCTCAGATCTCACAATCATACACTTTAAATTCCCTCCTTCTTTGCCACACGCCGTTTCGCAGTTTCTCTTTATGCCGTTTTTTGTTTGTTTTGCGTTCCGTGCTGTCTTGTGTTTAGTGGTTTAGTTCGTTACATGCAAAAACGACGATGAAGACGCCGAAACGCCACTCGCCGCCGCCGAACGATGGACGGCGAGTGGAGCCGGAGTCCGGCGAGGTTTTCGCTAGGTCCAAGAACGGCCGCCGGAGACGACTCAAAATCCGGCGAATGAAGTACACTTCGCCGCCGGAGGGAGAGAACTCGGAGAATTCAGAGAACATGGAGAAGAGAGAGATTCACGAGCGCGTCGAGATATCGCTCTCGCTGGCGTCGTCGTCTTCATCGGAGGAGGAGGAGCGGTTGTCGTTGAACCGAAACGGCGGCGTTTTGTCGTACGGTTCGGTTTCGGTGATAGGGAGCAGGAAGGAGATGGAGGACGCGGTGAGCGCGGAGGTAGGGTTCGCGCCGAAGTGCGACTTCTTCGCGGTGTACGACGGCCACGGCGGCGCGCAGGTGGCGCAGGCGTGCCGCCAGCGGCTGCACCGCCTCGTGGCGGAGGAGGTGGAGAGGAGCGAGGGTCGCGCGGAATGGAACTGGCGGGGAGTGATGGAAGGGTGTTTTCGTAAAATGGACGGCGAGGTCGCCGGTAATGCGGCCGTCAGAACGGTGGGTTCCACGGCGGTTGTCGCCGTCGTTGCGGCGGCGGAGATTGTCGTCGCTAATTGCGGTGATTGTAGGGCCGTCTTGGGAAGAGGAGGTGAGGCCGTGGACTTGTCCAGCGATCATAAGCCCGACAGGCCCGATGAGTTGCTGCGAATCGAAGAAGCTGGAGGAAGGGTCATCAACTGGAATGGCCAGCGCGTTCTTGGTGTTCTGGCTACTTCACGATCCATAGGAGATCAGTACCTTCGACCTTATGTGATATCAAAACCAGAAGTGACAGTGACCAAGAGAAGCAGCAAGGATGAATTTCTCATACTAGCAAGTGATGGATTGTGGGATGTGATGTCCAGTGAAGTTGTTTGCCAAGTTGTAAGAAAATCCCTCAATGGGCAGATAAGAACAGTGTGCAATGGTGTTGGGAATCATCAAAACCGAGCTGCAGAGGCTGCAGGCCTCTTAACTGAGATAGCATTGGCAAAGGGAAGTAGAGATAACACCAGTGTCATTGTAGTTGAGCTTAAAGGAACAGTAACATCTGATTGAGATCTCATTTTCTGCCAAAACATGTACTTTCTTTTTTCATCTCTTCTTGCCTTCCTGCTTTTGGACTAATATCCTCGAGAGACTATACATAATAACGACTAAATGTTTCCTCCCATCAGTTCCACTATTTTTTTAATCAAGCTTTTTAACAAAATAAGCTTCAATTTGATTGAAA 1569 0.5169 MKTPKRHSPPPNDGRRVEPESGEVFARSKNGRRRRLKIRRMKYTSPPEGENSENSENMEKREIHERVEISLSLASSSSSEEEERLSLNRNGGVLSYGSVSVIGSRKEMEDAVSAEVGFAPKCDFFAVYDGHGGAQVAQACRQRLHRLVAEEVERSEGRAEWNWRGVMEGCFRKMDGEVAGNAAVRTVGSTAVVAVVAAAEIVVANCGDCRAVLGRGGEAVDLSSDHKPDRPDELLRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRSSKDEFLILASDGLWDVMSSEVVCQVVRKSLNGQIRTVCNGVGNHQNRAAEAAGLLTEIALAKGSRDNTSVIVVELKGTVTSD 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02081 365 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Pste8g02081 365 FunFam Protein phosphatase 2C 51 88 365 - -
Pste8g02081 365 PANTHER PROTEIN PHOSPHATASE 66 358 IPR015655 GO:0004722|GO:0006470
Pste8g02081 365 Gene3D - 89 362 IPR036457 -
Pste8g02081 365 Pfam Protein phosphatase 2C 96 351 IPR001932 -
Pste8g02081 365 ProSiteProfiles PPM-type phosphatase domain profile. 95 358 IPR001932 -
Pste8g02081 365 SUPERFAMILY PP2C-like 87 359 IPR036457 -
Pste8g02081 365 CDD PP2Cc 95 358 IPR001932 -
Pste8g02081 365 MobiDBLite consensus disorder prediction 1 29 - -
Pste8g02081 365 MobiDBLite consensus disorder prediction 1 61 - -
Pste8g02081 365 SMART PP2C_4 85 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02081 Pste-Chr8 17404272 17409322 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02081 96 359 PP2C-type Phosphatase Gene Family AT2G29380 52.098 7.10e-85 260