Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02061 TTGTTTGTTCTCCAGATTGGTGTATTGAGGGAGTCCTCGTTTTACATCCATTGGAGCTAGAAAATGGCCAAGATCCTGGGCCTATTGTTAATAATTGGAGCAATATTGTTTGGTGTTGGAGCTGAACCAGTGGAAGATAAACAAGCATTGCTTGATTTCATTCACAACATTAACCACTCTCATCATCTTATCAACTGGAATAAGAGCTCTTCTGTGTGCAAAAGGTGGATAGGAGTGACCTGCAACACTGACCAATCACAAGTTATAGCTCTTCAATTGACCAGAACAGGATTGAGTGGTCCAATCCCTCCCAACACTCTTAGCCGTCTCTCAGCACTTCAAACTATGAGTCTTGCATCAAATAGCATAATTGGTTCTTTCCCTTCTGGTTTCTCTCAGCTAAAGAATTTAACCTATCTCTATCTCCAATTCAACAATTTTTCTGGTCCATTGCCATTAGACTTTTCAGTTTGGAAGAATCTTACTATTGTCAATTTATCCAACAATTCTTTCAATGGGAGCATCCCATTTTCTCTTTCAAATTTGACTCATCTAGCTTCTTTAGTCCTAGCCAACAACTCTCTTTCAGGTGAAATTCCTGATCTCAATATCCCTACCTTGAAAGAGCTGAATTTTGCCAACAATAAGCTTAGTGGGGTTGTGCCTAAATCCTTTGAGAAATTTCCAACTGGGGCATTTTCTGGTAACAATCTTACTTCTTCACATGCACTTGCTCCTTCTTTTGCTGTTAAACCTCCAAATCCTCATACAAAAAGTAAAAAATCCAAAGGACTTAAGGAACCAGCATTATTAGGCATCACCATTGGTGGTTGTGTGCTGGCACTTGCAGTGGTAGCAGCTTTTGTGATAGTGTGCCGCTATGAGAAAGGTGGTGCAGATGAACAACGAGTGAAGTATCAGAAAAGAGAAATATCTAGGAAAAAAGAAGGTTCTGAAAGCCGAGATAAGGACAAAATTGTTTTCTTTGAGGGATGCAATCTTGCATTTGACTTGGAGGACTTGCTGAGAGCTTCTGCTGAGGTGCTTGGAAAGGGCACGTTTGGGACAGTGTATAAGGCTGCTCTAGAAGATGCAACAACCGTGGCAGTGAAGAGGTTGAAGGATGTCACGGTCGGAAAACGCGAGTTTGAACAGCAGATGGAGATGGTTGGGAGGATTAGGCACAACAATGTGGCTTCACTGAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTCTCTTCAATGTTACATGGCAAAAGAGGGGGAGGCAGAATTTCTTTAGATTGGGACAACCGTTTGAAAATAGCAATTGGTGTAGCAAGAGGCATGGCTCACATCCATGGAGGGAAACTAACACATGGAAACATAAAGGCTTCAAACATCTTCCTAAACTCTCAAGGATATGGTTGTCTATCAGACGCTGGCCTTGCAACATTGATGAATCCAGCATTGAGGGCAACAGGATACCGTGCACCAGAAGCAACTGACACGCGAAAAGCTATGCCGGCATCTGATGTCTACAGCTTTGGTGTTCTTCTGCTTGAGCTTCTAACTGGAAGGTCTCCCTTACATGCCAAAGGGGGTGAAGAAGTTGTTCATTTAGTTAGGTGGGTGAATTCTGTGGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATGTGGAGTTACTAAGGTATCCAAATATTGAAGAGGAAATGGTTGAGATGCTACAAATTGGAATGGCATGTGTTGTGATAATACCAGATCAGAGGCCAAAAATTGGTGAAGTGGTGAGAATGGTGGAGGAAATTCGTAGAGTAAATGCTGAAAATAGATCATCAACTGAGTCTAGATCAGAAAGTTCCACTCCAACCCCTCATGCAGTTGAGACACCTTCTACCTCTTTTGCACATTGAGATTCTTTTGCTTTAGTCAAAAGTTGTTAAGGATGTAATTTAAGATTAAAGTAAC 1981 0.416 MAKILGLLLIIGAILFGVGAEPVEDKQALLDFIHNINHSHHLINWNKSSSVCKRWIGVTCNTDQSQVIALQLTRTGLSGPIPPNTLSRLSALQTMSLASNSIIGSFPSGFSQLKNLTYLYLQFNNFSGPLPLDFSVWKNLTIVNLSNNSFNGSIPFSLSNLTHLASLVLANNSLSGEIPDLNIPTLKELNFANNKLSGVVPKSFEKFPTGAFSGNNLTSSHALAPSFAVKPPNPHTKSKKSKGLKEPALLGITIGGCVLALAVVAAFVIVCRYEKGGADEQRVKYQKREISRKKEGSESRDKDKIVFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKDVTVGKREFEQQMEMVGRIRHNNVASLRAYYYSKEEKLMVYDYYEQGSVSSMLHGKRGGGRISLDWDNRLKIAIGVARGMAHIHGGKLTHGNIKASNIFLNSQGYGCLSDAGLATLMNPALRATGYRAPEATDTRKAMPASDVYSFGVLLLELLTGRSPLHAKGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVIIPDQRPKIGEVVRMVEEIRRVNAENRSSTESRSESSTPTPHAVETPSTSFAH 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02061 620 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Pste8g02061 620 ProSitePatterns Protein kinases ATP-binding region signature. 328 359 IPR017441 GO:0005524
Pste8g02061 620 SUPERFAMILY L domain-like 40 207 - -
Pste8g02061 620 FunFam pollen receptor-like kinase 1 291 396 - -
Pste8g02061 620 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515
Pste8g02061 620 FunFam Probable inactive receptor kinase RLK902 22 182 - -
Pste8g02061 620 SUPERFAMILY Protein kinase-like (PK-like) 326 584 IPR011009 -
Pste8g02061 620 MobiDBLite consensus disorder prediction 596 620 - -
Pste8g02061 620 Pfam Protein tyrosine and serine/threonine kinase 326 580 IPR001245 GO:0004672|GO:0006468
Pste8g02061 620 Gene3D Ribonuclease Inhibitor 22 236 IPR032675 -
Pste8g02061 620 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 397 598 - -
Pste8g02061 620 Pfam Leucine rich repeat 81 126 IPR001611 GO:0005515
Pste8g02061 620 Gene3D Phosphorylase Kinase; domain 1 287 396 - -
Pste8g02061 620 MobiDBLite consensus disorder prediction 591 620 - -
Pste8g02061 620 ProSiteProfiles Protein kinase domain profile. 322 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02061 620 PANTHER OS05G0588300 PROTEIN 9 600 - -
Pste8g02061 620 Gene3D Transferase(Phosphotransferase) domain 1 397 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02061 Pste-Chr8 16980283 16982965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02061 14 611 Receptor kinase-like Gene Family AT4G23740 55.466 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste8g02061 PK_Tyr_Ser-Thr 1.7e-34 CL0016