Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02050 TGAGAGAGAAGGGACAAAGGGTGGCTTTCAACTTTGAAGTAGAGTGTTGGAGTTTTTGCTGTGATGGGTAGTAGTAGGTGGTGGTTGGTTGAGGTCATAATTGTGGTGGGGTATGCCATTTTTCTTGGTACTGTTGGAGTAGTAGTAGTAGAAGGTTATGCAGCTGAGGATTTGGTGGTGAAATTGCCTGGCCAACCTAAGGTTGGGTTTAAGCAATTTGCTGGGTATGTTGATGTTGATGTCAAGCATGGAAGAAGCCTCTTCTACTATTTTGTGGAGGCTGAACAAGACCCTCAGAAGAAGCCCCTCACACTTTGGCTCAATGGAGGTCCTGGATGTTCCTCCATTGGAGGAGGTGCTTTTACTGAATTGGGACCCTTTTATCCTAAAGGTGATGGACGTGGTCTCAGAAGAAATTCAATGGCTTGGAATAAAGCATCCAACCTCTTATTTGTGGAATCTCCTGCTGGAGTAGGTTGGTCATACTCAAATACAACTTCAGATTATAATTCTGGAGATGCCTCAACTGCCAATGATATGTATTTATTCATGCTGAAATGGTATGAGAAGTTTCCATCATACAGAACAAGGGAGCTGTTCCTTACTGGTGAAAGCTATGCAGGACACTATATACCTCAATTAACCAATGTTTTATTGGACCATAATGTTCGTTCAAAGGGATTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCATTATTGAGACTTGATCGGGATGCACCTGCAACATATGAATACTTCTGGTCACATGGAATGATTTCTGATGAAATAGGCCAAGCCATTGTGAATGATTGTGATTTTGATGATTATCTCTATGCAAATCCTCACAATGTTTCTCAATCTTGCAACAATGCCATAGTTGAAGCAAATCTCATTGTTGGGGATTACATAAACGAGTATGATGTAATTCTAGATGTTTGTTATCCATCCATAGTGGAACAAGAACTCAGATTGAAAAGGATGGCAACTAAAATAAGTGTAGGTGTAGATGTGTGTATGAGTCTAGAAAGACGATTTTACTTCAATCTCCCTGAGGTTCAGAAGGCTCTTCATGCAAACCGTACCAATCTTCCTTATAGCTGGTCCATGTGCAGCCGTGTTCTAAACTACAGCGACACAGATGGTAACATAAACATACTTCCAATTCTCAAAAGAATAGTCCAAAACCAAATCCCAGTATGGGTTTTCAGTGGAGACCAAGATTCAGTTGTACCATTATTGGGATCTCGAACACTAATTCGTGAACTAGCTCATGAATTGAAGTTCAAAATTACAGTCCCATATGGAGCTTGGTTCCACAAAGGACAGGTTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTGACCTTTGCCACTGTAAGAGGAGCTGCTCACATGGTTCCTTACGCACAACCTTCAAGAGCACTTCACCTTTTCAGTTCATTTCTTCATGGAAGAAGGTTGCCCAATACAACACGTCCTTCCATTGATGATTAATGAACACTTTTCTTAGCCTTAATTTTGGAAGGGAAATGTAAAAGAGAAAAAAACTGTTTTGATTGTGTGAAAAGGAAAAGGAAAATTAACTTACAAAAAAGTTGCATTCCATGTACTTTTACTTTCTTCATTTGGTTGCATAGGTTTCTTTGGCTTTGTTATTCCTAAGTGTCTTGGTATTCTAGTGAAACATTTAAGCAATTTTATTTTGTTAGAGTTATATGTATGGCAACAAATGTTTT 1742 0.3921 MGSSRWWLVEVIIVVGYAIFLGTVGVVVVEGYAAEDLVVKLPGQPKVGFKQFAGYVDVDVKHGRSLFYYFVEAEQDPQKKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRRNSMAWNKASNLLFVESPAGVGWSYSNTTSDYNSGDASTANDMYLFMLKWYEKFPSYRTRELFLTGESYAGHYIPQLTNVLLDHNVRSKGFKFNIKGVAIGNPLLRLDRDAPATYEYFWSHGMISDEIGQAIVNDCDFDDYLYANPHNVSQSCNNAIVEANLIVGDYINEYDVILDVCYPSIVEQELRLKRMATKISVGVDVCMSLERRFYFNLPEVQKALHANRTNLPYSWSMCSRVLNYSDTDGNINILPILKRIVQNQIPVWVFSGDQDSVVPLLGSRTLIRELAHELKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFLHGRRLPNTTRPSIDD 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02050 478 Gene3D - 366 465 - -
Pste8g02050 478 Gene3D - 319 355 - -
Pste8g02050 478 FunFam Carboxypeptidase 32 296 - -
Pste8g02050 478 Pfam Serine carboxypeptidase 43 465 IPR001563 GO:0004185|GO:0006508
Pste8g02050 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 452 IPR001563 GO:0004185|GO:0006508
Pste8g02050 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Pste8g02050 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Pste8g02050 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Pste8g02050 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Pste8g02050 478 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Pste8g02050 478 Gene3D alpha/beta hydrolase 33 295 IPR029058 -
Pste8g02050 478 FunFam Carboxypeptidase 366 465 - -
Pste8g02050 478 SUPERFAMILY alpha/beta-Hydrolases 35 468 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02050 Pste-Chr8 16776311 16783879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02050 325 468 Calmodulin-binding Proteins AT2G22960 25.694 9.22e-11 59.3