Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02049 GACAAACCCCACATTACTAAAACATCCAAAACCATGCAGATTAAAACCCTTCCATTTGCACGCACTCCCACACCCAGCCACCACCTCTCCCCACCACGCGCCACCTCCCCACCGCCGCAGCGCCTCAACTCAATGCCGCCCGAGAAGCAAGAAATCTTCCACTCCCTATCGGGCTGGGCCTCGCAGCGGATCCTACCGCTCCTAAAGCCCGTGGGCCAATGCTGGCAGCCGCAGCACTTCCTCCCAGACCCAACCCTCCCCTCCGAAGAGTTCACCGAAGCAGTGAGGGCCCTTCGTGACCGAACAAAGGAGCTCCCGGAAGAGTACTTCGTGGTGCTGGTGGGCGACATGGTGACCGAAGAAGCGCTTCCCACCTACCAAACCATAATGAACAGCCTGGACGGGGTCAAAGACGACTGCGGCACGAGCCCAAGCCCGTGGGCCGTGTGGACCCGGGCCTGGTCTGCCGAAGAAAACCGACACGGGGATTTGCTCAGAACTTATTTGTACCTCTCTGGTCGGGTTGACATGAAGATGGTCGAAAAAACTATCCATTACCTCATTGCTGCTGGCATGGACCCTGGTTTTGATAACAACCCCTATTTGGGGTTTGTCTACACTTCATTCCAAGAGCGAGCAACATTTGTGTCACACGGGAACACTGCCCGGCTCGCAAAGGAGGGTGGCGATCCAGTGTTGGCGCGCATATGCGGGACCATTGCAGCGGACGAGAAGCGCCATGAGAATGCGTACTCTAGAATCGTCGAGAAGCTTCTAGAAGTGGACCCCACCGGAGCGATGGTGGCCATAGGAACCATGATGGAGAAGAAGATCTCGATGCCGGCACACCTTATGTACGATGGGGAGGATCCCAGGCTATTCGAGCACTATTCTACTGTGGCGCAGCGCATGGGAGTGTACACAGCTAAAGACTACGCTGACATTTTGGAGTTTCTGGTCCAACGGTGGAGATTGGAGAAGATGGAGGGTTTGACCGCTGAGGGAAAGCGGGCGCAGGATTTTGTGTGTGGGTTAGCACCGAGGATTAGGAGGCTGCAAGAGCGTGCTGATGAACGTGCCCGTAAGTTGAAGCCTTGTGGTGTCAAGTTCAGTTGGATCTTCAATAAGGAATTGCTTCTGTGATATTTTATTTAAGATTGCG 1162 0.5491 MQIKTLPFARTPTPSHHLSPPRATSPPPQRLNSMPPEKQEIFHSLSGWASQRILPLLKPVGQCWQPQHFLPDPTLPSEEFTEAVRALRDRTKELPEEYFVVLVGDMVTEEALPTYQTIMNSLDGVKDDCGTSPSPWAVWTRAWSAEENRHGDLLRTYLYLSGRVDMKMVEKTIHYLIAAGMDPGFDNNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYSRIVEKLLEVDPTGAMVAIGTMMEKKISMPAHLMYDGEDPRLFEHYSTVAQRMGVYTAKDYADILEFLVQRWRLEKMEGLTAEGKRAQDFVCGLAPRIRRLQERADERARKLKPCGVKFSWIFNKELLL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02049 369 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 22 369 - -
Pste8g02049 369 MobiDBLite consensus disorder prediction 19 33 - -
Pste8g02049 369 CDD Acyl_ACP_Desat 37 345 IPR005067 GO:0006631|GO:0045300
Pste8g02049 369 SUPERFAMILY Ferritin-like 27 368 IPR009078 -
Pste8g02049 369 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 22 367 IPR005067 GO:0006631|GO:0045300
Pste8g02049 369 PIRSF Dlt9_acylACP_des 5 369 IPR005067 GO:0006631|GO:0045300
Pste8g02049 369 Gene3D Ribonucleotide Reductase, subunit A 22 369 IPR012348 GO:0016491
Pste8g02049 369 Pfam Fatty acid desaturase 37 363 IPR005067 GO:0006631|GO:0045300
Pste8g02049 369 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02049 Pste-Chr8 16739495 16742025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02049 19 367 Acyl Lipid Metabolism Gene Families AT1G43800 74.571 0.0 554