Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02040 GTTGAACCCTTTGCTTAATTTGAGAAAAGAATTTTACATGGTGATTGATTGCAGAGCATATGAAGAATCTGAATGTGACTCTAGCTTGACAATTCAACATAAAGAATCAGAAACATTTGCAAGTGAAAAGTTGATCCAGCACCCACAACACTCAGAAACCAGTGCTGATCTCCAAAACATAAAAGATGAAAATTGGAAGCATTTATGTCACCCTTTGCCTCTTCCTCCTTATGGGTTATCACAGCATCTGCAATCAAAATGGATCAAGGGAAGGCTTCTTGGAAAAGGGTCATTTGGCCATGTCTATGCCGGATTCAATGGTATTAATGGACAGCTATGTGCAATTAAGGAAATGAAGCCTATTTGTGAGGATCAGAATTCTGAAGCTTATCTCAAAGAGATGAATCAGGAGGTAGAATTGCTGAGTCAGCTTTCTCATCGTAACATTGTCCAATATTATGGAAGCGAACTGGGGAAAGAAAAGTTGTCCCTATATTTAGAATATGTCTCTGGTGGATCAATTTACAAATTGCTTCAGGAATATGGCCCTTTCAAGGAATCTCTGATTAGAAGTTACACCATGCAGATTCTTCATGCACTAGCTTACTTGCATGCAAGAAATACTATACACAGGAATATTAAGGGCTCAAACATATTAGTAGATTCTAATGCTATAATCAAGCTTACTGATTTTGGCATGGCTAAAAATATAACATCAACTAGTTTTGTTCATTCTTTTGAAGGAAGCACTCATTGGACGGCACCTGAGGTGATTCTGAATACAAGCAGTGTTGGCCTTGCTGTTGATATATGGAGCTTGGGTTGTACAGTTATTGAAATGGCAACAACAAAGCCACCTTGGAGCAATTATAAAGGGGTTGCTGCAGTATTCAAAACTGCAAACAGCAATGATTACCAACAAATCCCTTCTCATCTTTCAAAGGATGCACAAAACTTTTTGAAACTTTGCTTACAGAGAGACCCTTTTTTACGTCCTTCGGCTACCCAACTGCTACAACATCCTTTTATTCAAGATAGTTGATTTTTCATTGGCTTTGAAAATTAAAGTCTGTTAAGCCATGCAAAAACATGTAACCAAACTTCAAATGTTACACCATGGTAAGCCCTTCACAGGTTACACTTATTCACAATTTGAAAAGCCTCTTGTCAAAACAACAAAAGTGCAGAAGCCCTCTGGTGCAGCTACTCGTCTTATTATTTCTTAGTTGCTCGAATTTTGAATGCATATGCTATTATGGTG 1261 0.3783 MVIDCRAYEESECDSSLTIQHKESETFASEKLIQHPQHSETSADLQNIKDENWKHLCHPLPLPPYGLSQHLQSKWIKGRLLGKGSFGHVYAGFNGINGQLCAIKEMKPICEDQNSEAYLKEMNQEVELLSQLSHRNIVQYYGSELGKEKLSLYLEYVSGGSIYKLLQEYGPFKESLIRSYTMQILHALAYLHARNTIHRNIKGSNILVDSNAIIKLTDFGMAKNITSTSFVHSFEGSTHWTAPEVILNTSSVGLAVDIWSLGCTVIEMATTKPPWSNYKGVAAVFKTANSNDYQQIPSHLSKDAQNFLKLCLQRDPFLRPSATQLLQHPFIQDS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02040 334 Pfam Protein kinase domain 77 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02040 334 Gene3D Transferase(Phosphotransferase) domain 1 72 334 - -
Pste8g02040 334 ProSiteProfiles Protein kinase domain profile. 75 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02040 334 SUPERFAMILY Protein kinase-like (PK-like) 50 333 IPR011009 -
Pste8g02040 334 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 33 333 - -
Pste8g02040 334 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02040 Pste-Chr8 16608534 16618460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02040 73 334 MAP Kinase Kinase Kinase AT1G53570 61.832 3.96e-122 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste8g02040 Pkinase 1.9e-67 CL0016