Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02023 ATGGAACACTTGCAACTGTGGCGAGTGTTAATGTTTTTATTAACCCTTGTAGTAGTTGCAGCTGTTACACCTAATCAAAATCAAATCCTTTCTGCAACACTAAACCAAACCCTACCTGGCTGCAAATCCACTTGTGGAGATATCCAAATTCCATATCCATTTGGCATAGGCAACTCATCTTTGCCCCATCACAAACCCTGTTTCCTGGATCCTCCATTCAATTTCAATCTTACTTGCACTAACTCCATATTAACATGGGGTGACAGTGGCATCCAAATTTTAAACATAAGCGTCCAAGAACATGAATTTGAGGTATCGTCTTACGTTTCCAGCTATTGCAATGATACAAGTTACAACGACCCTTGGATGGAAACTGCTACTTTCACCATTTCAACGAAAGAAAACAAGTTCCTAACTGTTGGCTGCGACAGTTATGGCTATGTCAATAGTTTTTATGACAACAGAAGTTATTCAACAGGGTGCATAACAAAATGTTATGGCAATGAATTGGAGATGGGTAATGGGACATGTTCGGGAATAGGGTGTTGCCAGGTGGATATTCCTCCTCAAATGAGGAATATCACTATACAAGCACATACCTTATCAAATTCATCATATTGGGCAAACCACTGCAGCAATTCCTTTGTGGTCAAGAATGGCATGTATAATTTTTCTACCACTCACTTACAGAGTTTCCCAAACACGACCCTCCCCTTGGCTCTTGATTGGACTGTTGGAGACAAAAACTGCAGTTCTATTGACAAAAATGGAGGCGACTATGCATGCAAGACTAATACCCGATGTGACGACAAGGACAGTGATTATGGTTACAGATGCATATGTAAAGATGGCTATCAAGGAAACCCTTATCTTGGCTGCACAGATATTGATGAATGTACGATAGGCAGTCATACATGTATAAGTCAAAATCATTGCTTCAACACCAATGGATCCTACACATGTTTCTGTCCAAAGGGACAATCTGGAAATGGAACAAAGGAAGAAGGGTATTGTCATCAACAAGATGTAGTTATCAAGATTATCATAGGAGTAGGAACAGGAATTGTTATTCTATTTGTGGGGACTACTTCATTTTACATGATATACCAAAAAAGGAAACTCATCAAACTGAGAGAGAAATACTTTAAGCACAATGGTGGTTCCATTTTGCTACAAAAACTCTCTACAAGAGAAGAGTCTTCTCACATTATTCAAATTTTCACTGAAGAGCAACTGAAGAAGGCCACCAACAACTTTGATGATAGTTTAATCATTGGCAAAGGAGGTTTTGGTACAGTTTTCAAAGGACATCTTGCAAATAATAAAGTTGTTGCTGTTAAGAAATCTAAAATAATTGATAAGAATCTAAATGAACAATTTGCAAATGAGGTGATTGTTCTATCCCAAATCAATCATAGGAATGTGGTCAAACTCTTAGGGTGTTGTTTAGAGACAGAAGTTCCTTTATTGGTTTATGAATTTATTAATAATGGTACTCTTTTCGATTATATACACACAGAAAGAAAGGTAAATGGCGAAACATGGAAAAATCGACTAAGAATAGCAACTGAAGCAGCTGGAGCTCTATCTTATTTGCACTCACAAGCCTCTGTGCCCATCATACACAGAGATGTAAAGACTGCTAACATCCTTTTAGATGACACTTACACAGCCAAAGTGTCTGATTTTGGAGCATCAAAACTAGTTTCACTTGATCAAATTGAAATAGCCACAATGGTGCAAGGGACTTTTGGTTACCTAGATCCAGAGTACATGCTTACAAGCCAGCTAACTGAGAAAAGTGATGTCTATAGCTTTGGGGTAGTGCTGGTAGAGCTATTAACAGGTGAAAAACCTCATTCTTTTGGTAGGCCAGAAGAGAAAAGAAGTCTTGCTAACCACTTTCTATCCAGCTTTAAGCAAGATCATCTGTTTGATGTTCTCCAACTTGGTATAGTGAATGAAGAAAATAAGAAAGAGATCATGGAAGTGGCTATTATTGCTGCCAAGTGTTTGAGACTCAATGGCGAAGAAAGGCCTAGCATGAAGGAAGTTGCAATGGAGTTAGACACAATAAGACAAATGGAGAAACACCCGTGGATCAATGAAAACCAAAATCTAGAGGAAACCCAATACTTGCTCCATGAGGCATCACCATCTATTATTTATGAACATGGTGATAGCAGCAATCATCAATATACTAGTTATGGTTATAATGATAGTATTAAGGATAATGTCTTAATTGCTTTAGATAATGGAAGATGA 2265 0.3797 MEHLQLWRVLMFLLTLVVVAAVTPNQNQILSATLNQTLPGCKSTCGDIQIPYPFGIGNSSLPHHKPCFLDPPFNFNLTCTNSILTWGDSGIQILNISVQEHEFEVSSYVSSYCNDTSYNDPWMETATFTISTKENKFLTVGCDSYGYVNSFYDNRSYSTGCITKCYGNELEMGNGTCSGIGCCQVDIPPQMRNITIQAHTLSNSSYWANHCSNSFVVKNGMYNFSTTHLQSFPNTTLPLALDWTVGDKNCSSIDKNGGDYACKTNTRCDDKDSDYGYRCICKDGYQGNPYLGCTDIDECTIGSHTCISQNHCFNTNGSYTCFCPKGQSGNGTKEEGYCHQQDVVIKIIIGVGTGIVILFVGTTSFYMIYQKRKLIKLREKYFKHNGGSILLQKLSTREESSHIIQIFTEEQLKKATNNFDDSLIIGKGGFGTVFKGHLANNKVVAVKKSKIIDKNLNEQFANEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFINNGTLFDYIHTERKVNGETWKNRLRIATEAAGALSYLHSQASVPIIHRDVKTANILLDDTYTAKVSDFGASKLVSLDQIEIATMVQGTFGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKPHSFGRPEEKRSLANHFLSSFKQDHLFDVLQLGIVNEENKKEIMEVAIIAAKCLRLNGEERPSMKEVAMELDTIRQMEKHPWINENQNLEETQYLLHEASPSIIYEHGDSSNHQYTSYGYNDSIKDNVLIALDNGR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02023 754 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Pste8g02023 754 ProSiteProfiles EGF-like domain profile. 295 333 IPR000742 -
Pste8g02023 754 Pfam Protein kinase domain 424 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02023 754 FunFam Wall-associated receptor kinase 2 495 712 - -
Pste8g02023 754 Pfam Wall-associated receptor kinase galacturonan-binding 41 106 IPR025287 GO:0030247
Pste8g02023 754 SMART serkin_6 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02023 754 ProSitePatterns Calcium-binding EGF-like domain signature. 295 321 IPR018097 GO:0005509
Pste8g02023 754 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 700 IPR045274 GO:0007166
Pste8g02023 754 Gene3D Transferase(Phosphotransferase) domain 1 495 716 - -
Pste8g02023 754 CDD STKc_IRAK 425 692 - -
Pste8g02023 754 Pfam Calcium-binding EGF domain 295 332 IPR001881 GO:0005509
Pste8g02023 754 SMART egf_5 298 339 IPR000742 -
Pste8g02023 754 SMART egf_5 249 294 IPR000742 -
Pste8g02023 754 CDD EGF_CA 295 329 - -
Pste8g02023 754 Pfam Wall-associated kinase 175 282 IPR013695 GO:0004674|GO:0016020
Pste8g02023 754 FunFam Fibrillin 2 290 335 - -
Pste8g02023 754 FunFam Wall-associated receptor kinase 2 389 494 - -
Pste8g02023 754 Gene3D Phosphorylase Kinase; domain 1 391 494 - -
Pste8g02023 754 SUPERFAMILY EGF/Laminin 295 330 - -
Pste8g02023 754 ProSiteProfiles Protein kinase domain profile. 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02023 754 SMART egfca_6 295 339 IPR001881 GO:0005509
Pste8g02023 754 ProSitePatterns EGF-like domain signature 2. 279 293 IPR000742 -
Pste8g02023 754 SUPERFAMILY Protein kinase-like (PK-like) 397 689 IPR011009 -
Pste8g02023 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Pste8g02023 754 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 312 323 IPR000152 -
Pste8g02023 754 Gene3D Laminin 248 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02023 Pste-Chr8 16331468 16335531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02023 11 754 Receptor kinase-like Gene Family AT1G21230 42.636 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste8g02023 Pkinase 1e-47 CL0016