Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02022 ATGGAACACTTGCAACGGTGCCGGGTGTTAATGTTTACATTAGTCCTCGTAGTAGTTTTCTCACCTCATCAAACCCTTTCTGAAACCCTAAAAAAGGCCCTCCCTGGCTGCAATTCCACTTGTGGAAATCTCAAAATTCCATATCCATTCGGTATAGGCAACTCAACTATATCCGATGAGCCATGTTTTCTGGACGAAACATTCAACGTTGCATGCGAAAATTCCACTCTATATTATGGTAACACCCCAGTTTTAAACATAAGCATCCAAAATCATCAAATAGACCTATTCGTGTTCGTGGCATACATTTGCTATGCGAACGATACCATGTTGAACTCCCAGTCTTCCAGCCTGACCACTTATTTCAGCATTTCGAGCAAGGAAAACAAGTTACTAACTGTTGGCACAGGTAGCTATGGCTATGTCAATAGTTTTTTCAACGGAGAGTCATATTCAACTGGGTGCGTAACCGTCTCTAAAGGCCATAAAAGGAAGATTCAAAATGGAACGTGCTCGGGTATAGGGTGTTGCCAAGTGGATATTCCTCCTCTTATGAGGAATATCACAGTAGAGACACAACTAATGCCAGATTCATCGCTGGAGTGGGGAAACTGCAGCTATTCCTTTGTTGTGAAAGATGGCTATTATAATTTTTCAACCACTCATTTACATAGCTTTCCGGACGAGAGACTCCCCTTGGTTCTTGATTGGACTGTAGGAGAAGAAAACTGTAAAGCATCAAAGAGTAGAGAGGACTATGCATGCAGGAACAATAGCTATTGTCATGACACGGATTCTGACTATGGTTACAGATGCATATGTAATCCTGGCTATGAAGGAAACCCTTACCATCCTGATGGCTGTACAGGAGTAGGAACGGGAATTATTGTTTTATTTGTGGCAACTTCTTCATTGTACATCATATACCAGAAAAGGAAACTCGTCAAACTTAGAGAGAAATACTTTAAGCAAAATGGTGGTTCTATTTTACTACAGAAACTATCTGAAAAGTCTTCTCACATTATTCAAATTTTCACAGAAGAACAGTTAAAGAAGGCCACCAACAACTTTGACGAGAGTTTAATCATTGGCAAAGGAGGTTTTGGTACAGTTTTCAAGGGGTATCTTGCAGATAACACAGTCGTAGCAGTCAAGAAGTCCAAAATAGTTGATAAGAACCAAAAGGAACAATTCGCTAATGAGGTTATTATTCTATCCCAAATCAATCATAGGAATGTGGTCAAACTTTTGGGATGTTGTTTAGAGACAGAAGTTCCTTTGTTGGTTTATGAATTTGTCAACAATGATACCCTTTTTGATTATATACACATTGAAAGAAAGGTAAATGATGAGACTTGGAAGAAGCGCGTAAGGATAGCAACTGAGATAGCTGGAGCTCTATCATATTTGCACTTACAAACCTCCGTGCCCATCATACACAGAGATGTGAAAACTGCTAACATCCTTTTAGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCATCAAAACTAGTTCCTCTTGATCAAATTGAATTAGCCACAATGGTCCAAGGAACTTTTGGTTACCTAGATCCGGAGTACATGCTTACAAGCCAGCTAACTGAGAAAAGTGATGTCTATAGCTTTGGAGTAGTGCTGGTAGAGCTATTAACAGGTGAAAAACCTCATTCTTTTGGTAGGCCAGAAGAGAAAAGAAGTCTTGCTAACCACTTTTTATCTAGCTTTAAACAAGATCGTTTGTTTGATGTTCTCCAAGTTGGCATAGTGAATGAGGAAAATAAAAAAGAGATTATAGAGGTCGCTATTATTGCAACAAAGTGCTTGAGACTCAATGGAGAGGAAAGGCCTAGCATGAAGGAAGTTGAAATGGAGTTGGACGCGATAAGAAAAATGGAGAAGCACCCATGGATCAATAAAAGCCAAAATCTTGAGGAAACCCAATACTTACTCCATGACGCATCGCCATCTAGAATTTATGAACGTGGTGACAGCAGTAGCCATCAATATACTGAGTATGGTTATGGTTATGATAGTATCAAGGATCGTGTACTAATTGCTTTGGATAATGGAAGATGA 2082 0.3948 MEHLQRCRVLMFTLVLVVVFSPHQTLSETLKKALPGCNSTCGNLKIPYPFGIGNSTISDEPCFLDETFNVACENSTLYYGNTPVLNISIQNHQIDLFVFVAYICYANDTMLNSQSSSLTTYFSISSKENKLLTVGTGSYGYVNSFFNGESYSTGCVTVSKGHKRKIQNGTCSGIGCCQVDIPPLMRNITVETQLMPDSSLEWGNCSYSFVVKDGYYNFSTTHLHSFPDERLPLVLDWTVGEENCKASKSREDYACRNNSYCHDTDSDYGYRCICNPGYEGNPYHPDGCTGVGTGIIVLFVATSSLYIIYQKRKLVKLREKYFKQNGGSILLQKLSEKSSHIIQIFTEEQLKKATNNFDESLIIGKGGFGTVFKGYLADNTVVAVKKSKIVDKNQKEQFANEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNDTLFDYIHIERKVNDETWKKRVRIATEIAGALSYLHLQTSVPIIHRDVKTANILLDDTYTAKVSDFGASKLVPLDQIELATMVQGTFGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKPHSFGRPEEKRSLANHFLSSFKQDRLFDVLQVGIVNEENKKEIIEVAIIATKCLRLNGEERPSMKEVEMELDAIRKMEKHPWINKSQNLEETQYLLHDASPSRIYERGDSSSHQYTEYGYGYDSIKDRVLIALDNGR 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02022 693 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 638 IPR045274 GO:0007166
Pste8g02022 693 FunFam Wall-associated receptor kinase 2 433 650 - -
Pste8g02022 693 Pfam Wall-associated receptor kinase galacturonan-binding 37 95 IPR025287 GO:0030247
Pste8g02022 693 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Pste8g02022 693 Pfam Protein kinase domain 361 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02022 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Pste8g02022 693 ProSiteProfiles EGF-like domain profile. 246 289 IPR000742 -
Pste8g02022 693 SUPERFAMILY EGF/Laminin 252 281 - -
Pste8g02022 693 CDD EGF_CA 255 280 - -
Pste8g02022 693 Pfam Wall-associated kinase 169 275 IPR013695 GO:0004674|GO:0016020
Pste8g02022 693 CDD STKc_IRAK 363 630 - -
Pste8g02022 693 Gene3D Transferase(Phosphotransferase) domain 1 433 654 - -
Pste8g02022 693 SUPERFAMILY Protein kinase-like (PK-like) 339 625 IPR011009 -
Pste8g02022 693 Gene3D Phosphorylase Kinase; domain 1 322 432 - -
Pste8g02022 693 ProSiteProfiles Protein kinase domain profile. 357 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02022 693 FunFam Wall-associated receptor kinase 2 329 432 - -
Pste8g02022 693 SMART serkin_6 357 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02022 Pste-Chr8 16312279 16318131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02022 30 693 Receptor kinase-like Gene Family AT1G21230 40.566 1.03e-163 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste8g02022 Pkinase 1e-48 CL0016