Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02012 TGGCCTAAGCAAGAAGTCTATCGTCCCTTCCAATCTCCTATGATTTCAAATTTTGTGATATTAACAATGGAACACTTTCTGTTTGCATTAACCATTGTTGCAGTTGTTGTAGTTTTTTCACCTCATCAAACACTTTCTGCAACACTGAACCAAGCCCTACCTGGCTGCAATTCCACATGTGGAGGTGTCCAAGTTCCATATCCATTCGGTGTTGGAAACTCATCCACACCCAATCAACAACCATGTTTCTTGGAACCCCACTTTGAACTCACTTGCAACAACTCCATTAATCAGTTAATATGGGGTAACGTCCCAGTTTTGAACATAAGCGTCTTAACGCATGAAATGGACGCATCGTTTTGGGTCTCTCGTTATTGTGATGGTGAAAATTACAATCACCCATGGCTGAAAACAGGTAAATTCAGCGTTTCAAGGAAGGAAAACAAGTTCCTAGCAGTTGGATGTGACAGTTATGGCTATCTCGATAGCGTTTATGACGGGAAAACATACTCAACGGGGTGCTTAACGAGATGTTATGGCAATGGTGTGAGCATTGAGGATGAAACATGTTCGGGAATAGGGTGTTGCCAAGTAGATATTCCTCCTCGAATGAGGGATATCGAGGTCAAAGCTTCTATCTTCCCCAATTCAACTGAAGATTGGAGAAACTGCAGCTATTCCTTTGTGGTCAAAAATGGCTTTTATAACTTTTCTACTACTCATTTACGTCGCTTCCCAAACAGTACCTTACCCTTGGTTGTTGATTGGACTGTGGGAGACAAAAATTGTAGTGCTTTTGAGAGTAATAGAGATAAGTATGTGTGCCAGGAGAATAGCTATTGTGACGACAAGGACAGTGATTTTGGCTACAGATGCATATGTAAAGATGGCTATGAAGGAAATCCTTATCTTGGATGCACAGATATTTTAGAATGTACGAGTGACAAACACAATTGCATTAGTAAAGACCATTGCCGAGAAACTGAAGGTCATTTTCAGTGTTTTTGTCCTGAAGGACAATTTGGAGATGGAACAAAAGAAGGTGAAGGATGTCAATCAAAACAGTCAAAACGACATGATGTATTTACCAAGGTAGCCATTGGTGCTGGCGTAGGATTAATTGTTCTATTTATTGGGATTTCTTCCATGTACTTGATATACCAAAAAAGGAAAGTTCTAAAATTGAAAGAGAAGTTCTTTAAACAAAATGGTGGTATGATTCTAAAACAACAACTCTCTACGAAAGAAGATTCATCTGCATCTACTACAATTTTCAGTGCAGAACAACTTAAAAAGGCCACAAACAATTTTGATGAGAACTTAATCATTGGTAAAGGAGGTTTTGGTACAGTTTTTAAAGGATATCTCTCAAATAATAAGATTGTTGCTATCAAAAAGTCCAAAATAATAGATCAAGCTCAGGTCGAGCAATTCATTAATGAGGTCATTGTACTATCACAAATAAATCATAGAAATATTGTCAAACTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCTTTATTAGTGTATGAATTTGTTAACAATGGTACCCTTTTCGATTATTTACATAAAGAAAGTCATGCAACTAAAGTATGTTGGAAGACTCGACTAAGGATAGCAACAGAGGCAGCTGGAGCTTTGTCATATCTACATTCTGCAGCCTCTATACCTATCATCCATAGAGATGTTAAGACTGCCAATATACTTTTAGATGAAAATTATATAGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTAGTTCCACTTGATCAAACTGAATTAGCCACAATGGTCCAAGGAACTTTTGGCTATTTAGATCCAGAATACATGCAAACAAGTCATTTGACTGAAAAAAGTGATGTTTATAGTTTTGGAGTCGTGCTTGTAGAACTGTTAACAGGAGAGAAGCCTTTTTCTTTCAATAAGGATGAAGAGAAACGAAGTCTTACTATTCACTTTCTATGTAGCTTGAAAGAGGATCGTCTTTTTGAAGTTCTTCAAATTGGTATTTTGGATGAGCACAATAAACAAGAGATCATGGAGGTTGCTATTCTTGCTGCCAAGTGCTTAAGACTTAGAGGAGAGGAAAGACCAAGCATGAAGGAAGTGGCAATGGAATTGGAGGGAATAAGACTAACAGAGAAGCATCCTTGGATCAACATAGATAAAAATGTGGAAGAGACTTGTTATTTGCTTCATGATGCATCATCTAGTATTTATGAGCCTGGTGATAGTAGCAATAATCAATATGCAGGATATGATAGCATTAGGGATCATGTACTAATTACTTTGGATGATGGAAGATGA 2307 0.3758 WPKQEVYRPFQSPMISNFVILTMEHFLFALTIVAVVVVFSPHQTLSATLNQALPGCNSTCGGVQVPYPFGVGNSSTPNQQPCFLEPHFELTCNNSINQLIWGNVPVLNISVLTHEMDASFWVSRYCDGENYNHPWLKTGKFSVSRKENKFLAVGCDSYGYLDSVYDGKTYSTGCLTRCYGNGVSIEDETCSGIGCCQVDIPPRMRDIEVKASIFPNSTEDWRNCSYSFVVKNGFYNFSTTHLRRFPNSTLPLVVDWTVGDKNCSAFESNRDKYVCQENSYCDDKDSDFGYRCICKDGYEGNPYLGCTDILECTSDKHNCISKDHCRETEGHFQCFCPEGQFGDGTKEGEGCQSKQSKRHDVFTKVAIGAGVGLIVLFIGISSMYLIYQKRKVLKLKEKFFKQNGGMILKQQLSTKEDSSASTTIFSAEQLKKATNNFDENLIIGKGGFGTVFKGYLSNNKIVAIKKSKIIDQAQVEQFINEVIVLSQINHRNIVKLLGCCLETEVPLLVYEFVNNGTLFDYLHKESHATKVCWKTRLRIATEAAGALSYLHSAASIPIIHRDVKTANILLDENYIAKVSDFGASRLVPLDQTELATMVQGTFGYLDPEYMQTSHLTEKSDVYSFGVVLVELLTGEKPFSFNKDEEKRSLTIHFLCSLKEDRLFEVLQIGILDEHNKQEIMEVAILAAKCLRLRGEERPSMKEVAMELEGIRLTEKHPWINIDKNVEETCYLLHDASSSIYEPGDSSNNQYAGYDSIRDHVLITLDDGR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02012 768 SUPERFAMILY EGF/Laminin 308 343 - -
Pste8g02012 768 SMART serkin_6 437 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02012 768 Pfam Protein kinase domain 441 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02012 768 ProSitePatterns EGF-like domain signature 2. 292 306 IPR000742 -
Pste8g02012 768 Gene3D Transferase(Phosphotransferase) domain 1 513 730 - -
Pste8g02012 768 Pfam Wall-associated kinase 187 295 IPR013695 GO:0004674|GO:0016020
Pste8g02012 768 Gene3D Phosphorylase Kinase; domain 1 401 512 - -
Pste8g02012 768 Pfam Wall-associated receptor kinase galacturonan-binding 56 116 IPR025287 GO:0030247
Pste8g02012 768 FunFam Wall-associated receptor kinase 2 513 730 - -
Pste8g02012 768 ProSitePatterns Protein kinases ATP-binding region signature. 443 466 IPR017441 GO:0005524
Pste8g02012 768 SMART egf_5 311 352 IPR000742 -
Pste8g02012 768 SMART egf_5 262 307 IPR000742 -
Pste8g02012 768 CDD EGF_CA 308 339 - -
Pste8g02012 768 ProSiteProfiles Protein kinase domain profile. 437 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02012 768 FunFam Wall-associated receptor kinase 2 407 512 - -
Pste8g02012 768 ProSiteProfiles EGF-like domain profile. 308 346 IPR000742 -
Pste8g02012 768 FunFam Fibrillin 2 303 347 - -
Pste8g02012 768 Gene3D Laminin 262 351 - -
Pste8g02012 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Pste8g02012 768 SUPERFAMILY Protein kinase-like (PK-like) 418 708 IPR011009 -
Pste8g02012 768 CDD STKc_IRAK 443 710 - -
Pste8g02012 768 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 48 715 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02012 Pste-Chr8 16117782 16121585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02012 29 768 Receptor kinase-like Gene Family AT1G21230 43.576 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste8g02012 Pkinase 3.4e-51 CL0016