Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02011 GGTGTGACTGGGTGATAATGAGTGACAATGCTTCAAATATGGTAGTCCATAGTTTTGCTTCATTAGTGAACAAAGCCATAGGGAGTATTAGGGTTAGTGCAGAAGCAAATTTGAGAGCATCCCCTTTCCCTGTCCGTACTTTTGCTTCCGTTACCGGTGTTGAGCCTACAGTAGTGGTTAACAGTTTTTCAGTTGACAACAAGCATGGTAGTGAAACTGTTGATGGTGGCAGGGTCACAATCAAGTTTGCAATTTCATATTGGTATGGTGAAGCCAGTCTTGCCTTGCCTCGTAGCTTCTCAGCATCTTCTGATGTCTGCAACAATGCCAATTTCATACCATCTCCATCCCCTCTTCATGGTTTTGATTCCAAAGTGAACTTGAAGATGAGGATTGATTTTAAAGCAGCCAGTAACAATTTCTCATTAGACAACAAGATTGGTAATGGAACAATAGATGGAGGAGGATGCCCAAAAACGCAGAGAAATGATATACTTACAAAGGTTGCTAACGGTATTCTCCTTGCTGAATTACATGCGTTTCCTTATTCATGTTATTTGAAAGCAAGTGTAGGTGATGGGTTAATTCCTCTATTTATGCGGTCATCTTGGATATATTTCCTAAAATTAAAAGAGAAATTCCTCCAACAAGATGGTCAACTCTCTGCAACTGAAAACTTGCCTCACTCCGCCACATTTTTCACTGCACAGCAACTTATGAATGCCACCAACAATTTTGATGAGAACTTAATCATTGACAAAAAGTTTACAGTACAATTTTCAAAGGATATCTCTCAAGGTTGGTGCTGTAAAAAATTTACACTTTTGGGTCGTTGTCCTGAGACAACAGATCCATTACTAGTTTATGAATTTGTTGACAAAGCAATTGAGTTAGCTCGAACTCTATCATATCTCCACTCAAACTCCATATCCATTATCCACCGACATGTGAAGTGTGCCAACCGAACTTACATATCTAATTTTGGAGTTTCAAGATTAGTTCCACTTTATCAACATGAATTAACTACAATTTTACACAAAACTTTTGGCTATTTCAACCCAGAATATGTACAAACAAGTTATTTGACTAGAAAAAATGATGTTTATAATTTTGGCGCAGTGCTTGTAGAACTTGTTACAGGAGAGAAACTTTTCTCTTTTTACACAAAACAAGAGAAAAGAAGTCTTACCATTGACTTTTTGAGTAGCTTGAAAGAAATTCGTCGGTTTAAAATTCTTCAAATTGGTATTTGGAATGAAGAAAATAAACTTGAGATCATGAAGGTTACTATTCTTGCTGCCAAGTGTTTGAGACTTAAAGGAAGAAAAAGACCTAGTATGAAGGAAAGGAGACTCAATACTTGTTTGATGAGGCTTCATCTAACATTTGTAGGCCGTGACAGCAAAAACCATCAATATGCTGGGTATGACAGCATTGAGGATCATGTATGCATAATAATGATGGTGGGTATGACATTTGATGCAATATTGAGTTTTCGCGGGAGAGTGAACTTGTCGATAATGAGTGAGAGTGGTTCAGATTTGGGAGCATCACCCATCCCTAGTTTTGCTTCATTACTGGATAGAGCCATAAGGAGTAGTAAGGTTTGTGCAGAAAATTTGAGAGCATCCCCTTGCCCTATCCATGCTTTTTCTTCTGCAGTGGACATGAGGACAAATAGTGGTGAGCTTACTATCAAGAGGAGTCAAACATGGCCAAAGATTAGTGCTGAAACCGTTGATGGTGGAGAGCCAAAGAGAAAGAGTGAAAATAAGTCTCATTTGAACTTCTTCTCCAACGTTGGAACCTCATCTCGTTACCGATGCACATGTCAAGGTTTTGAGGGAGCCCCTAACCATCCCCATGGTTGGCAAGACATTCCGGAAAGACTAATTGGAAATGGAACAATAGAAAAAGGAATACAAAACAACTTAAGGAAGCCACCAACAATTTTAATAAGAACTCAATTGTCAAAGAAGTACAATTTTCAATGGATGTCTTTCAGACAACAAATTATTGCTATCAAAAAGTTCAAAATTGTAAATCAGAGCCAAATTGAGCGATTCATTAATGAGTTGTTGTCTACAGACAGAAGTTCCCTTAGTATTGAAGCTCAATCATATTTACACTCAATAGACTCTGTACCCATCAATATATATATGAAAACTACCAACGTACTCTTAGATGAGAATCACAAAGTCAAATTCGGTGTTGGAGTTTCAAAATTGATTCCACTTTATGAAACCCACAATGATCAAGGAACTTTAGACTATTTGGACCGTGAGTACAAGCAAACACGTGAATTACTTACAGGAGAGAAATTTTCCTATTTTTATCAAGAAGAAGAGATAACAAGTCTTAGTATTAACTTTTTGTGTAGCTTGAAAGAGAATCGTTTATTTGAAGTTTTTCAAAATGGTCTTTTGGATGAAGAAAATAAAAAACAGATACTATGGGTTGCTATTCTTGCTGTCAAAAAGACCAACGTAAAGCAAGTAGCGAGGGAGTTGGAGGAAATAAGTCCAACGGAGAAGTTTTCATGGTTTAACATAAATAAATATATAGAAAAAGCTCAATACTTGCTTCATGAAGCATCATCTAGTATTTACGAGCATGGCAGTATCGCAACCATCAATATGTTGGCGATGGAACACTTTCTCTGGCAGGTGTTAATGTTTGCATTAACCATTGTTGCAGTTATTGTAGCTTTTTCACCTCATCAAACACTTTCTGCAACACTGAACCAAACCCTACCTGGCTGCAATTCCACCTGTGGGGGTGTCCAAGTTCCATATCCATTTGGTATAGGAAACTCATCAACACATAACCAACAACCTTGTTTCTTGGATCCCCGTTTTAATGTTACTTGCAATAACAACATCTTAAAAATATGGGACAGCGTCACGGTTTTAAACATAAGCGTCCCAACTCATGAAATGGATGTGTCGTTTTGGGTCTCTCGTTATTGTGATGGTGAAAATTACAATCACCCATGGCTGAAAACAGGTAAATTCAGCGTTTCAAGGAAGGAAAACAAGTTCCTAGCAGTTGGATGTGACAGTTATGGCTATCTCGATAGCGTTTATGACGGGAAAACATACTCAACGGGGTGCTTAACGAGATGTTATGGCAATGGTGTGAGCATTGAGGATGAAACATGTTCGGGAATAGGGTGTTGCCAAGTAGATATTCCTCCTCGAATGAGGGATATCGAGGTCAAAGCTTCTATCTTCCCCAATTCAACTGAAGATTGGAGAAACTGCAGCTATTCCTTTGTGGTCAAAAATGGCTTTTATAACTTTTCTACTACTCATTTACGTCGCTTCCCAAACACGACCTTCCCCTTGGTTCTTGATTGGACCGTGGGGGACAAAAATTGTAGTGCTTTTAAGAGTAACAGAGATAACTATGCGTGCAAAGAGAATAGCGATTGTGACGACAAGGACAGTGATTATGGTTACAGATGCATATGTAAAGATGGCTATGAAGGAAACCCTTATCTTGGCTGCACAGATAATTGTCGAGAAACGGAAGGCAGTTTTGAGTGTTTTTGTCCTGAAGAACAATTCGGAGATGGAACAAATGATGGTGAAGGATGTCAATCAAAGCAGTCGGAACGACATGACATATTTACCAAGGTAGCCATTGGTGTTGGTGTAGGATTAGTTGTTCTATTTATGGGGACTTCTTCTATGTATTTGATGTACCAAAAAAGGAAAGTTCTAAAATTGAAAGAGAAGTTCTTTACACAAAATGGTGGTATGATTCTAAAACAACAACTCTATGGGAGAGAAGATTCATCTCAATCTACTACAATTTTTAGTGCTGAGCAACTTAAAAAGGCTACCAACAATTTTGATGAAAACTTAATTATTGGTAAAGGAGGTTTTGGTACCGTCTTTAAAGGATGTCTCTCAAATAATAAGATTGTTGCTATCAAAAAGTCAAAAATAGTGGATCAAGGCCAGGTCGAGCAATTCATTAATGAGGTCATTGTACTATCACAAATAAATCATAGAAATGTTGTTAAACTTTTGGGTTGTTGTTTAGAGACAGAAGTTCCTTTACTAGTATATGAATTTGTTAACAATGGTACCCTTTTTGATTATTTACATAAAGAAAGTCATGCAACTAAAGTATGTTGGAAGACTCGTCTAAGGATAGCAACCGAGGCAGCTGGAGCCTTATCGTATCTACATTCTGCAGCCTCCATACCCATAATCCATAGAGATGTGAAGACGGCTAATATACTTTTAGATGAAACTTACACAGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTCGTTCCACTTGATCAAACTGAATTAGCCACGATCGTGCAAGGAACTTTTGGCTATTTGGACCCAGAATACATGCAAACAAGTCATTTAACTGACAAAAGTGATGTTTATAGCTTTGGAGTAGTACTTGTAGAACTGCTAACAGGGGAGAAACCTTTTTCCTTTGATAGGGATGAAGAGAAAAGAAGTCTTACTATTCACTTTTTATGTAGCTTGAAAGAGGATCGTCTTTTTGAAGTTCTTCAAATTGGTATTTTGGATGAAGATAATAAACAAGAGATCATGGAGGTTGCTATTCTTGCTGCCAAATGCTTACGGCTTAGAGGGGAGGAAAGGCCGAGCATGAAGGAAGTGACAACGGAATTGGAGGGAATAACACTAATAAAGAAGCATCCTTGGATCAACATAGATAAAAATTTTGAGGAGACTCGTTACTTGCTTCATGATGCATCATCTAGCATTTATGAGCCTGGTGATAGTAGTACTCATCAATATGCAGGATATGATAGCATTAGGGATCATGTACTAGTTACTTTGGATGATGGAAGA 4850 0.3788 MSDNASNMVVHSFASLVNKAIGSIRVSAEANLRASPFPVRTFASVTGVEPTVVVNSFSVDNKHGSETVDGGRVTIKFAISYWYGEASLALPRSFSASSDVCNNANFIPSPSPLHGFDSKVNLKMRIDFKAASNNFSLDNKIGNGTIDGGGCPKTQRNDILTKVANGILLAELHAFPYSCYLKASVGDGLIPLFMRSSWIYFLKLKEKFLQQDGQLSATENLPHSATFFTAQQLMNATNNFDENLIIDKKFTVQFSKDISQGWCCKKFTLLGRCPETTDPLLVYEFVDKAIELARTLSYLHSNSISIIHRHVKCANRTYISNFGVSRLVPLYQHELTTILHKTFGYFNPEYVQTSYLTRKNDVYNFGAVLVELVTGEKLFSFYTKQEKRSLTIDFLSSLKEIRRFKILQIGIWNEENKLEIMKVTILAAKCLRLKGRKRPSMKERRLNTCLMRLHLTFVGRDSKNHQYAGYDSIEDHVCIIMMVGMTFDAILSFRGRVNLSIMSESGSDLGASPIPSFASLLDRAIRSSKVCAENLRASPCPIHAFSSAVDMRTNSGELTIKRSQTWPKISAETVDGGEPKRKSENKSHLNFFSNVGTSSRYRCTCQGFEGAPNHPHGWQDIPERLIGNGTIEKGIQNNLRKPPTILIRTQLSKKYNFQWMSFRQQIIAIKKFKIVNQSQIERFINELLSTDRSSLSIEAQSYLHSIDSVPINIYMKTTNVLLDENHKVKFGVGVSKLIPLYETHNDQGTLDYLDREYKQTRELLTGEKFSYFYQEEEITSLSINFLCSLKENRLFEVFQNGLLDEENKKQILWVAILAVKKTNVKQVARELEEISPTEKFSWFNINKYIEKAQYLLHEASSSIYEHGSIATINMLAMEHFLWQVLMFALTIVAVIVAFSPHQTLSATLNQTLPGCNSTCGGVQVPYPFGIGNSSTHNQQPCFLDPRFNVTCNNNILKIWDSVTVLNISVPTHEMDVSFWVSRYCDGENYNHPWLKTGKFSVSRKENKFLAVGCDSYGYLDSVYDGKTYSTGCLTRCYGNGVSIEDETCSGIGCCQVDIPPRMRDIEVKASIFPNSTEDWRNCSYSFVVKNGFYNFSTTHLRRFPNTTFPLVLDWTVGDKNCSAFKSNRDNYACKENSDCDDKDSDYGYRCICKDGYEGNPYLGCTDNCRETEGSFECFCPEEQFGDGTNDGEGCQSKQSERHDIFTKVAIGVGVGLVVLFMGTSSMYLMYQKRKVLKLKEKFFTQNGGMILKQQLYGREDSSQSTTIFSAEQLKKATNNFDENLIIGKGGFGTVFKGCLSNNKIVAIKKSKIVDQGQVEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHKESHATKVCWKTRLRIATEAAGALSYLHSAASIPIIHRDVKTANILLDETYTAKVSDFGASRFVPLDQTELATIVQGTFGYLDPEYMQTSHLTDKSDVYSFGVVLVELLTGEKPFSFDRDEEKRSLTIHFLCSLKEDRLFEVLQIGILDEDNKQEIMEVAILAAKCLRLRGEERPSMKEVTTELEGITLIKKHPWINIDKNFEETRYLLHDASSSIYEPGDSSTHQYAGYDSIRDHVLVTLDDGR 1611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02011 1611 Gene3D Transferase(Phosphotransferase) domain 1 268 452 - -
Pste8g02011 1611 Pfam Wall-associated receptor kinase galacturonan-binding 915 976 IPR025287 GO:0030247
Pste8g02011 1611 SMART serkin_6 1280 1562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02011 1611 ProSiteProfiles Protein kinase domain profile. 1280 1562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02011 1611 FunFam Wall-associated receptor kinase 2 1250 1355 - -
Pste8g02011 1611 ProSiteProfiles Protein kinase domain profile. 135 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02011 1611 Pfam Protein kinase domain 1284 1547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02011 1611 Pfam Protein kinase domain 290 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02011 1611 FunFam Wall-associated receptor kinase 2 1356 1573 - -
Pste8g02011 1611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1401 1413 IPR008271 GO:0004672|GO:0006468
Pste8g02011 1611 Gene3D Phosphorylase Kinase; domain 1 1248 1355 - -
Pste8g02011 1611 ProSitePatterns EGF-like domain signature 2. 1150 1164 IPR000742 -
Pste8g02011 1611 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 907 1554 IPR045274 GO:0007166
Pste8g02011 1611 Pfam Wall-associated kinase 1045 1153 IPR013695 GO:0004674|GO:0016020
Pste8g02011 1611 CDD STKc_IRAK 1286 1553 - -
Pste8g02011 1611 SUPERFAMILY Protein kinase-like (PK-like) 269 443 IPR011009 -
Pste8g02011 1611 SUPERFAMILY Protein kinase-like (PK-like) 1261 1551 IPR011009 -
Pste8g02011 1611 ProSitePatterns Protein kinases ATP-binding region signature. 1286 1309 IPR017441 GO:0005524
Pste8g02011 1611 Gene3D Transferase(Phosphotransferase) domain 1 1356 1569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02011 Pste-Chr8 16086436 16103850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02011 666 878 Receptor kinase-like Gene Family AT1G21230 29.568 1.32e-17 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste8g02011 Pkinase 3e-50 CL0016