Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02010 ATGATGGCTCCGAAGGCCACAAAAATATTGCAACTGACCGTGGCGCTGCTGATTGCGTTAGCAGGCGCTGACCAAGCCCTGCCCGGCTGCCGGACCACCTGCGGAAACGTTTCTCAGATTCCGTATCCATTCGGCATAGGCAGATCATCCCTCACCAGAGAAAACTGTTTCTTTGAGAAGGCATTGGAACTAACTTGCAGAAACGGCAAGTTATATCGTGGAAACGGAAAGGTGCAAATTGTGAACATAACCCTCAACGGGAAAATGGACATGCTTTGGGGCGTCTCCAAGGTTTGCAGAAACGATTCGGATCAATCCCGAAGAAGAGGCATCGAATTCAGTCTCAGAACTCCGGCGTTTCCAATTTCGAGCGAGGACAACAAGTTCGTCAGTGTGGGATGCGACACTTACGGATACCTCAACAATTACCGTAACGGCAAGAAATCCTCAACGGGGTGCTTGACACGCTGTAACAGTAGAGAGAGCTTGCTAACCATGCTCGGACATGGCAACTGCATCGGCATAGGCTGCTGTCAGGTGGATATACCTCATGGAATGAAGAACATTAGTGTGCAAGCATTCAGCTTCAACAATTTCAACTCCTCTTTGGGCATAAACAACTGCAGCTACTCCTTTGTGGTCAAAAACGGCAACTACGCTTTCAAGTTGGGTGATTTAAACGGTTTGCCGTTTGAAAAGGCACCCTTTGTTGTGGATTGGGCTGTTGGAAAGGACATGTGTAGCGTTTCCAAGGGTAGATTGGACTATGCGTGCAAGAGTAATAGTGATTGTGTGGACTCTGCCACAGGATATGCTTACCGATGCAAGTGTAAGGATGGTTACGTGGGAAATCCCTACCTTACTTATGGTTGTCAAGATTTTTCGGAATGTAAGACTGGAAAACACAATTGTGAAAGTGTAGATTATTGTCATGAAATCCCTGGGTCTTTTATATGTTCATGTCCTAAAGGACTATTTGGAAATGCAACAAAAGAAGGTGGAGGATGTAGAAGAAAGGACAGAAATGATGTATTTACCAAAGTTGCCATTGGGGTTGGTGTAGGATTAATTGCTCTGTTTATGGGAACTTCTTGGTCATTCTTGATGTACCAGAAAAGGAAAGTTTTGAAATTAAAGGAGAAGTTTTTTCAGCAAAATGGTGGTATGCTTTTGAAACAACAACTTTCTACAAGAAACGATTCATCTCAGCCCACAACAATTTTCACTGCAGAGCAACTTAAGAAAGCAACCAATGATTTTGATGAGAGCTTAATCATAGGAAAAGGAGGTTATGGGACGGTTTTCAAAGGATTTCTCACACATAACAATGTGGTTGCTATCAAAAAGTCCAAAATAGTGGATCAAAGCCAAGTAGAGCAATTCATTAACGAGGTCATTGTATTATCACAAATTAATCATAGGAATGTGGTCAAACTTTTGGGTTGTTGTTTAGAGACAGAAGTTCCATTACTGGTATATGAATTTGTTAACAATGGTACCCTTTTTGATTATGTACACAATGAATTTAAGACAGTAAATGTATCTTGGAAAAATCGTTTAAGGATAGCAATAGAAGCCGCTGAAGCTTTATCATATCTACACTCAGCAGCCTCCATACCCATCATCCACAGAGATGTTAAGACTGCAAACATACTCTTAGATGATACTTACACAGCCAAAGTATCTGATTTTGGAGCTTCAAGATTGGTTCCTCTTGATCAATTTGAATTAGCTACAATTGTGCAAGGAACTTTTGGCTATTTGGATCCAGAGTACATGCAAACAAGTCAATTGACCGAGAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTTGTAGAATTACTAACAGGGGAGAAGCCTTTCTCTTTGGATAGGCCAGAAGAGAAACGTAGTCTCACAATTCACTTTCTATCTTGCTTGAAACAAGATCGCTTATTTGAAGTTCTTCAAATGGGTATTATGGATGAAGAAAATCAACAAGAGATCATGGAAGTTGCAATTCTTTCTGCAAAGTGTTTGAGACTTAGTGGGGAGGAAAGGCCTAGCATGAAGGAAGTAGCAATGGAATTGGAAAGGATAAGAAGAATGGAGAAACACCCATGGGACAATAAAAGCCAAAATTTTGAGGAGACTGAATACTTACTTCATGAAGCTCGTAGTACTCATGGTCGTGGTGACAGTAGTGGCCATCAAAATACTGGATTTGACACCATGAGAGATGTTGAATTAATTGACTTTGGTGGTGGAAGATGA 2253 0.4137 MMAPKATKILQLTVALLIALAGADQALPGCRTTCGNVSQIPYPFGIGRSSLTRENCFFEKALELTCRNGKLYRGNGKVQIVNITLNGKMDMLWGVSKVCRNDSDQSRRRGIEFSLRTPAFPISSEDNKFVSVGCDTYGYLNNYRNGKKSSTGCLTRCNSRESLLTMLGHGNCIGIGCCQVDIPHGMKNISVQAFSFNNFNSSLGINNCSYSFVVKNGNYAFKLGDLNGLPFEKAPFVVDWAVGKDMCSVSKGRLDYACKSNSDCVDSATGYAYRCKCKDGYVGNPYLTYGCQDFSECKTGKHNCESVDYCHEIPGSFICSCPKGLFGNATKEGGGCRRKDRNDVFTKVAIGVGVGLIALFMGTSWSFLMYQKRKVLKLKEKFFQQNGGMLLKQQLSTRNDSSQPTTIFTAEQLKKATNDFDESLIIGKGGYGTVFKGFLTHNNVVAIKKSKIVDQSQVEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYVHNEFKTVNVSWKNRLRIAIEAAEALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQFELATIVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSLDRPEEKRSLTIHFLSCLKQDRLFEVLQMGIMDEENQQEIMEVAILSAKCLRLSGEERPSMKEVAMELERIRRMEKHPWDNKSQNFEETEYLLHEARSTHGRGDSSGHQNTGFDTMRDVELIDFGGGR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02010 750 SUPERFAMILY EGF/Laminin 292 328 - -
Pste8g02010 750 ProSiteProfiles Protein kinase domain profile. 420 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02010 750 CDD STKc_IRAK 426 693 - -
Pste8g02010 750 Pfam Calcium-binding EGF domain 293 326 IPR001881 GO:0005509
Pste8g02010 750 SMART egf_5 246 292 IPR000742 -
Pste8g02010 750 SMART egf_5 296 337 IPR000742 -
Pste8g02010 750 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 702 IPR045274 GO:0007166
Pste8g02010 750 SUPERFAMILY Protein kinase-like (PK-like) 399 691 IPR011009 -
Pste8g02010 750 FunFam Wall-associated receptor kinase 2 496 713 - -
Pste8g02010 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Pste8g02010 750 SMART serkin_6 420 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02010 750 FunFam Wall-associated receptor kinase 2 390 495 - -
Pste8g02010 750 Gene3D Phosphorylase Kinase; domain 1 384 495 - -
Pste8g02010 750 Pfam Protein kinase domain 424 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02010 750 Gene3D Laminin 244 334 - -
Pste8g02010 750 FunFam Fibrillin 2 288 332 - -
Pste8g02010 750 Gene3D Transferase(Phosphotransferase) domain 1 496 718 - -
Pste8g02010 750 ProSitePatterns Protein kinases ATP-binding region signature. 426 449 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02010 Pste-Chr8 16072201 16075511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02010 5 750 Receptor kinase-like Gene Family AT1G21230 43.725 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste8g02010 Pkinase 1.8e-49 CL0016