Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02009 TAATGGAACACTTGCAACCGTGCCAGGTGTTACTGTTCGCGCTAGCCCTTGCAGTAGTTAACATTGTTTCACCACATCAAATACAAGCCCTTTCTGAAGCCACACCTACACAAACCCAAACACTGTCTGGCTGCAAATCCACTTGTGGAGATGTCAAAATTCCATATCCATTCGGTATAGGCAACTCATCTACACTCCATCACCGAACCTGTTTCTTGGGTCCCAATTTTGAAGTTAATTGCGCTAATGACTCCAAATTATATTTGGGTAACGTGAGAGTTTCAAACATAAGCCTTCAAAGTGATCATCTAATAGATCTACTGTTCTACCCAGCATCACTTTGTCACAGAGAAAATGGAAGCCAACTCCCTGAAAGCAAGGAAAACAAGTTACTAACGGTTGGCACAGATAACTATGGCTATGGGGAGTCATATTCAACTGGGTGCTTAACCAGTTCTCATGGCCATAGCAAGAAGATTCAAAATGGAACGTGTTCGGGTATTGGATGCTGCCAAGTGGCTATTCCTCAGGGAATGAGGAACATCTCTGTAAGGGTAAAAGATCTCAATAATCGAGACAAAAATAATGTGGAAAACTGCAGCTATTCCTTTGTGGAAATTTCCCACATGAAAAAGAACTCCCTTTGGTTCTTGATTGGACCGTGGGAGACAAAAATTGGTGCTTTTGAGAGTAATAGAGATAAGTATGTGTGCAAGGAGAATAGCTACTGTGACGACAAGGACAGTGATTATGGTTACAGATGCATTGCAAATATGGCTATCAAGGAAACCCTTATCTTGGCTGCGCAGACATTGACGAATACACAGAGTACTCATACATGCATAAGTGAACAAAATTGTGGCAACACCGATGGATCCCACACATGGGGCATTCGGAGATGGAACAAAGGGAATAGGGTGCCACCAAGAAGATTCACTTACCAAGGTTGTCATAGAAAAGGAAACTCCTTAAACTCAAGGAGAAATACTTTAATCAAATGGTGGTTACATTTTGCTTCAACAACTAGCTACACAAGAAAATTCCTCCCAAGAGAACAACTAAAAAAGGCCACCAATAACTTTGATGAGAGTTTAATCATTGGTACAGGAGGTTTTGGTACTGTTTTTAAAGGATATCTGGCTGATAATAGAATTGTTGCTGTTAAGAAATCTAAAGTAGTGGATGAGAGTCAAAAGGAACAATTCATTAACGAGGTGATTATTCTTTCTCAAATCAACCATAGAAATGTGGTCAAACTTTTGGGATGTTGTTTAGAGAGAGAAATTTCTTTATTGGTTTATGAATTTGTTATTAATGGTACACTTTGTGATTTCGTACACATTAAAAGGAAGGTAAATGAAGAAACTTGGAATACACGATTAAGGATAGCAGCAGCTGGAGCTTTATCATATCTGCACTATGCAACCTCAATACCCATTATCCATAGAGATGTCAAAACAACTAATATCCTCTTAGATGATACTTACACTTGTAAAGTGTTTGATTTTAGAGCTTCAACATTAGTTCCACTTGATAAAACTGAAATAGCCACAATGGTGCAAGGAACTTTTGGTTACCTAGATCCAGAGTACATGCTCACAAGTCAACTAATAGAGAAAAGTGATGTCTATAGTTTTGGAGTTGTACTTGTAGAGTTGCTAACAGGAGAGAAACCTTATTCTTTTGGCAAACCAAAAGAAAAAAGAAGTCTTGCTAACCACTTTCTATGTTGCTTGAAAGAGGATCGATTATTTGATGTTCTACAAGTTGGCATTTGTAATGAAGAAAATAAAAATAGAATTATGGAGGTTGCTATTCTTGCTACAAAGTGTTTGAGAATTAAAGGGGAGGAAAGACCTAACATGAAGGAAGTGGCAATGAAATTGGATGAAATAAGGATAATGGAGAAGCATCATGAGATTAATACATACCAAAATCTAGAGGAGACTCAACAGTTATTGCACAAGCCATCATCTAGCATTTATGAATCTGGTAATAGCAATGACCATCAATATGGTGGGTATGATAGCATTAAGGATCATGTACGAATTGATTTGGATGATGGA 2066 0.3809 MEHLQPCQVLLFALALAVVNIVSPHQIQALSEATPTQTQTLSGCKSTCGDVKIPYPFGIGNSSTLHHRTCFLGPNFEVNCANDSKLYLGNVRVSNISLQSDHLIDLLFYPASLCHRENGSQLPESKENKLLTVGTDNYGYGESYSTGCLTSSHGHSKKIQNGTCSGIGCCQVAIPQGMRNISVRVKDLNNRDKNNVENCSYSFVEISHMKKNSLWFLIGPWETKIGAFESNRDKYVCKENSYCDDKDSDYGYRCIANMAIKETLILAAQTLTNTQSTHTCISEQNCGNTDGSHTWGIRRWNKGNRVPPRRFTYQGCHRKGNSLNSRRNTLIKWWLHFASTTSYTRKFLPREQLKKATNNFDESLIIGTGGFGTVFKGYLADNRIVAVKKSKVVDESQKEQFINEVIILSQINHRNVVKLLGCCLEREISLLVYEFVINGTLCDFVHIKRKVNEETWNTRLRIAAAGALSYLHYATSIPIIHRDVKTTNILLDDTYTCKVFDFRASTLVPLDKTEIATMVQGTFGYLDPEYMLTSQLIEKSDVYSFGVVLVELLTGEKPYSFGKPKEKRSLANHFLCCLKEDRLFDVLQVGICNEENKNRIMEVAILATKCLRIKGEERPNMKEVAMKLDEIRIMEKHHEINTYQNLEETQQLLHKPSSSIYESGNSNDHQYGGYDSIKDHVRIDLDDG 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02009 688 ProSiteProfiles Protein kinase domain profile. 360 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02009 688 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 35 638 IPR045274 GO:0007166
Pste8g02009 688 SMART serkin_6 360 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02009 688 Gene3D Transferase(Phosphotransferase) domain 1 437 655 - -
Pste8g02009 688 Pfam Wall-associated receptor kinase galacturonan-binding 44 101 IPR025287 GO:0030247
Pste8g02009 688 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Pste8g02009 688 FunFam Wall-associated receptor kinase 2 436 651 - -
Pste8g02009 688 SUPERFAMILY Protein kinase-like (PK-like) 341 628 IPR011009 -
Pste8g02009 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Pste8g02009 688 Pfam Protein kinase domain 364 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02009 688 FunFam Wall-associated receptor kinase 2 334 435 - -
Pste8g02009 688 Gene3D Phosphorylase Kinase; domain 1 326 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02009 Pste-Chr8 16054149 16058922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02009 29 688 Receptor kinase-like Gene Family AT1G21250 35.957 2.11e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste8g02009 Pkinase 3.4e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g02009 8 16054149 16058922 Pste2g03251 2 32424981 32427786 PCT