Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02008 AAGAATGGGATTGAAGGGCATGCAGATGCAACTGACCGTGGTGCTGCTAATCACGTTGGCAGCAGCTGACCAAGCACTGCCCGGCTGCCCGGACTCTTGCGGAAGCGTGTCACCGATTCCGTATCCATTCGGCATAGGCAAATCTTCAACCACAGGCGAAAACTGCTTCATGGAGGAGCCATTGGAGCTGACATGCAACGAAACGATTCTGTATCGTGGATCCGGTAACGTCCAAATTTTGAACATAACCCTAAACGGCAAAATGGACATGCTCACCTTCGTTTCCAGCGTATGCAGAAACGAGTCTCTTGGAAGCGTAGAAACCGCAGGAAACGAACCGAGTCTGAGCACCCCAGCGTTTGCAATCTCCAGCGAGGACAACAAGTTCGTTACAGTAGGCTGCGACAGCTACGGTTACCTTAACAGTTTTCGCGACGGTGTGAAATCCTCAACGGGGTGTCTGACACGATGTGACAGTGAAAAGAGTGTGGAACGAATGCAGAGAGGTGGGAACTGCACGGGCATAGGGTGCTGCGAGATTTATATACCTCAGGGAATGAAGGATATTACTCTGCAAGCTTTCAGTTTTCGCAATTTCAATTCCTCTTCTCAGTTCAACAACTGCAGCCACTCCTTTGTGGTGAAAAACGACAACTATACCTTCTCCTTGGACCATTTAAACGACATCCCGTTCGTCAAGGCACCCTTTGTCGTCGATTGGAGCGTTGGAAACGCCACATGTGAAATTTCGAAGCATAAAAGTGATTATGCATGCCAGAATAATAGCCATTGTGAGGACATTCCCACTGAAGATGGTTACAGATGCAAATGTAATCAAGGTTTTGAGGGAAACCCTTACCATCCTGCTGGTTGCCAAGACATTTTGGAATGTAGCACAAGCCGGCACAACTGTGCTAGGGAAGATTATTGTCGTGAGATTCCTGGATCTTTCGAATGTTTTTGTCCGGAAGGACTTGTTGGAAATGGAACCAAACAGGATGGGGGATGCAGAAAAAAGCAGCGAAATGATGTATTTATCAAGGTTGCCATTGGTGGGGGTGTCGGTTTGATTGCTCTATTTATTGGAACTTCTTGGCTATACTTGATATATCAAAAAAGGAAACTCTTAAAATTGAAGGAGAAGTTCTTTAAGCAAAATGGTGGTATGATTTTAAAACAACAACTTTTCAATAGAGAAGAGTCCTCTCAATCTACTACAATTTTTACGACAGAACAACTTAAGAAAGCCACAAACAATTTTGATATGAATTTAATCATCGGTAAAGGAGGTTATGGTACAGTATTCAAAGGATGTCTCTCAAATAGCAAGATTGTGGCTATCAAAAAGTCCAAAATAGTGGATCAAAGTCAAATTGAGCAATTCATTAATGAGGTTATTGTATTATCACAAATTAATCATAGGAATGTAGTCAAACTCTTAGGTTGTTGTCTAGAGACAGAAGTTCCATTGCTGGTATATGAATTTGTTAACAACGGTACCCTTTTTGATTATTTACACAATGAACACAAGGTAGCTAAAGTATCTTGGAAAACACGTCTAAGAATAGCTACAGAAGCAGCTGAAGCTCTATCATATCTACACTCAGCTGCCTCTATACCCATCATCCATAGAGATGTGAAGACTGCTAACATACTCTTGGATGACACTTACACTGCAAAAGTCTCTGATTTTGGAGCTTCAAGATTGGTTCCCCTTGATCAAACTGAATTAGCCACGATTGTGCAAGGAACTTTTGGTTACTTGGATCCAGAGTACATGCAAACAAGCCAATTGACTGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTACTTGTAGAACTACTAACAGGAGAGAAACCTTTCTCTTTTGATAGGACTGAAGAGAAACGAAGCCTTACAGTTCACTTTTTATGTTGCTTAAAAGAAGATCAATTATTTGATGTTGTTCAAATTGGTATTTTGGATGAAGAAAATAAACAAGAGATCATGGAGGTTGCTATTCTTGCTGCAAAGTGCTTGAGACTTAGAGGAGAGGAAAGACCTAGTATGAAAGAAGTAGCAATGGAGCTAGAAGGACTAACACGAATGGAGAAACATCCATGGACCACCAAAAGCCAAAATATTCATGAGTCTCAATACTTGCTTCACGAGGCATATAGCACTCATGAACATGGGGACAGCAGTGGCATTCAAATAACTGGATATGATAGCTTGACAAGTCTTAAATTAATTGACTATGGACTATGTCGCAGTTCTCATGGCCATAGCAAGAAGATTGAAAGTGGAACGTGTTGGGGTATAGGGTGCGGTCAAGTAGATATTCCTCAAGGAATGACGAACATCTCTGTAAGGGTAAAAGATCTCAATAATCGAGAGAAAAATAATGTGGGAAACTGCAGCTATTCCTTTGCGGTCAAAAATGGCTTTTATGATTTTTCTACCACTGATTTAGGAAATTTCCCACATGAAAAAGAACTCCCTTTGGTTCTTGATTGGACCGTGGGAGACAAAAATTGTAGTGCTTTTGAGAGTAATAGAGATAAGTATGTGTGCAAGGAGAATAGCTACTGTGACGACAAGGACAGTGATTATGGTTACAGATGCATTGCAAATATGGCTATCAAGGAAACCCTTATCTTGGCTGCACAGACAACTTATATTGTTCGTCCCTTGATTTTTCTAAAATTCAAGATTTTAGTT 2701 0.4106 MGLKGMQMQLTVVLLITLAAADQALPGCPDSCGSVSPIPYPFGIGKSSTTGENCFMEEPLELTCNETILYRGSGNVQILNITLNGKMDMLTFVSSVCRNESLGSVETAGNEPSLSTPAFAISSEDNKFVTVGCDSYGYLNSFRDGVKSSTGCLTRCDSEKSVERMQRGGNCTGIGCCEIYIPQGMKDITLQAFSFRNFNSSSQFNNCSHSFVVKNDNYTFSLDHLNDIPFVKAPFVVDWSVGNATCEISKHKSDYACQNNSHCEDIPTEDGYRCKCNQGFEGNPYHPAGCQDILECSTSRHNCAREDYCREIPGSFECFCPEGLVGNGTKQDGGCRKKQRNDVFIKVAIGGGVGLIALFIGTSWLYLIYQKRKLLKLKEKFFKQNGGMILKQQLFNREESSQSTTIFTTEQLKKATNNFDMNLIIGKGGYGTVFKGCLSNSKIVAIKKSKIVDQSQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHNEHKVAKVSWKTRLRIATEAAEALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTELATIVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFDRTEEKRSLTVHFLCCLKEDQLFDVVQIGILDEENKQEIMEVAILAAKCLRLRGEERPSMKEVAMELEGLTRMEKHPWTTKSQNIHESQYLLHEAYSTHEHGDSSGIQITGYDSLTSLKLIDYGLCRSSHGHSKKIESGTCWGIGCGQVDIPQGMTNISVRVKDLNNREKNNVGNCSYSFAVKNGFYDFSTTDLGNFPHEKELPLVLDWTVGDKNCSAFESNRDKYVCKENSYCDDKDSDYGYRCIANMAIKETLILAAQTTYIVRPLIFLKFKILV 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02008 899 ProSiteProfiles EGF-like domain profile. 247 291 IPR000742 -
Pste8g02008 899 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Pste8g02008 899 SUPERFAMILY Protein kinase-like (PK-like) 398 689 IPR011009 -
Pste8g02008 899 Gene3D Phosphorylase Kinase; domain 1 384 494 - -
Pste8g02008 899 FunFam Wall-associated receptor kinase 2 495 712 - -
Pste8g02008 899 SUPERFAMILY Growth factor receptor domain 243 857 IPR009030 -
Pste8g02008 899 FunFam Wall-associated receptor kinase 2 389 494 - -
Pste8g02008 899 Pfam Protein kinase domain 424 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02008 899 Gene3D Laminin 244 335 - -
Pste8g02008 899 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 694 IPR045274 GO:0007166
Pste8g02008 899 SMART egf_5 245 291 IPR000742 -
Pste8g02008 899 SMART egf_5 295 336 IPR000742 -
Pste8g02008 899 CDD STKc_IRAK 425 692 - -
Pste8g02008 899 SMART egfca_6 246 291 IPR001881 GO:0005509
Pste8g02008 899 SMART egfca_6 292 336 IPR001881 GO:0005509
Pste8g02008 899 FunFam Fibrillin 2 287 332 - -
Pste8g02008 899 ProSiteProfiles Protein kinase domain profile. 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02008 899 CDD EGF_CA 292 326 - -
Pste8g02008 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Pste8g02008 899 Gene3D Transferase(Phosphotransferase) domain 1 495 718 - -
Pste8g02008 899 Pfam Wall-associated receptor kinase galacturonan-binding 28 85 IPR025287 GO:0030247
Pste8g02008 899 SMART serkin_6 419 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02008 Pste-Chr8 16040039 16048109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02008 688 867 Receptor kinase-like Gene Family AT1G21230 23.913 7.12e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste8g02008 Pkinase 5.3e-51 CL0016