Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02007 ATTGACGAATGTAAGACACAGAGTACTCATACATGCATAAGTGAACAAAATTGTGGCAACACCGATGGATCCCACACATGGTTTTGTCCAAAGGGGCATTCCGGAGATGGAACAAAGGGAATAGGGTGCCACCAAGAAGATTCACTTACCAAGGTTGTCATAGGAGTAGAAGCAGGAATTATTGTTGTATTTGTGGGTATTACCTCATTCTATCTTATATACCAGAAAAAGAAACTCCTTGAACTTAAGGAGAAATACTTTAATCAAAATGGTAGTTCCATTTTGCTTCAACAATTGGCTACACAAGAAAATCCTTCTCAAATTCCTCAAATTTTTACAAAAGAACAATTAAAGAAGGCTACCAACAACATTGATAGGAGCTTAATCATTTGTAGAGGAGATTTTGGTTCTGTTTTCAAAGGATTTCTATTTGATAAAAGAATTGTGGCTGTTAAGAAATCCAAAGTAATGGATGAGAGTCAAAAGGAACAATTCATTACCGAGGTGATCGTTCTTTCACAAATCAACCATAGAAATGTGGTCAAACTTTTCGGATGTTGTTTAAAGAGAGAAATTTCTTTATTGGTTTATGAATTTGTTATTAATGGTACACTTTTTGATTTCATACACATTGAAAGAAGAATAACACTTGAGGTAACTGGAGGTCTATCATATCTGCACTCTGCAGCCTCAATACCCATTATTCATAGAGATGTCAAAACAACTAATATCCTCTTAGATGATACTTATAAAGTGTATGATTTTGCAGCTTCAAGGTTGGTTCCACTCGATAAAACTGAAATAGTCACAATAGTCCAAGAAACTTTTGAAGAGAAAAGTAGTCTTGCTAACCACTTTCTATGTTGCTTGAAAGAGGATCGACTATTTGATGTTCTACAAGTTGGATTATGGAAGTTGCTATTCTCGCTGCAAGGGGAGGAAAGAAATAACATGAAGGAAGTGGCAATGGAGTTGGATGGAGTAAGGATGAAGGAGAAACATCATGAGGTTAATACATACCAAAATCTAGAGGAGACTCAACACTTCTGCATAGGCCATCATCTAGCATTTGAGTGTGATGATAGTAGTAACCATCAATATAGTGGGTATGATAGCATTAATGCTCACTTACGAATTGATTTGGATGATGGAAGA 1155 0.3584 IDECKTQSTHTCISEQNCGNTDGSHTWFCPKGHSGDGTKGIGCHQEDSLTKVVIGVEAGIIVVFVGITSFYLIYQKKKLLELKEKYFNQNGSSILLQQLATQENPSQIPQIFTKEQLKKATNNIDRSLIICRGDFGSVFKGFLFDKRIVAVKKSKVMDESQKEQFITEVIVLSQINHRNVVKLFGCCLKREISLLVYEFVINGTLFDFIHIERRITLEVTGGLSYLHSAASIPIIHRDVKTTNILLDDTYKVYDFAASRLVPLDKTEIVTIVQETFEEKSSLANHFLCCLKEDRLFDVLQVGLWKLLFSLQGEERNNMKEVAMELDGVRMKEKHHEVNTYQNLEETQHFCIGHHLAFECDDSSNHQYSGYDSINAHLRIDLDDGR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02007 385 SMART serkin_6 124 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02007 385 Pfam Protein kinase domain 130 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02007 385 FunFam Wall-associated receptor kinase-like 10 142 199 - -
Pste8g02007 385 Gene3D Phosphorylase Kinase; domain 1 96 199 - -
Pste8g02007 385 SUPERFAMILY Protein kinase-like (PK-like) 105 268 IPR011009 -
Pste8g02007 385 Gene3D Laminin 1 43 - -
Pste8g02007 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pste8g02007 385 ProSiteProfiles Protein kinase domain profile. 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g02007 385 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 9 276 IPR045274 GO:0007166
Pste8g02007 385 Gene3D Transferase(Phosphotransferase) domain 1 201 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02007 Pste-Chr8 16027112 16029111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02007 1 385 Receptor kinase-like Gene Family AT1G21250 37.991 4.39e-82 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste8g02007 Pkinase 4e-25 CL0016