Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01994 GCAGAATCATCAAACTTTCCAATAATAATTAATTATTTTCTTGGAATATTGAAGCCATGTCTAGCACTGCTGGTCAGGTCATCAGGTGCAGAGCTGCTGTGGCATGGGAACCAGGGAAGCCATTATCAATAGAAACAATAGAAGTAGCACCACCACAGAAGGGTGAAGTGCGTTTGAAGATCCTCTTCAACTCCCTTTGCCGTACTGATGTTTACTGGTGGGATGCTAAGGGCCAAAATCCACTGTTTCCTCGAATCCTAGGTCACGAAGCTTCAGGGATTGTGGAGAGTGTGGGAGAGGGAGTGACCAATCTGAAACCAGGTGACCATGCACTTCCAATTTTCACTGGGGAGTGTGGAGAATGCAAATACTGCAAGTCAGAAGAGAGCAACCTGTGTGAGTTACTCAGGATCAACACTGACAGAGGAGTTATGCTCAGTGATGGCAAAACAAGGTTCTCCAAAAATGGACAACCCATTTACCACTTTGTGGGAACATCCACATTCAGTGAATACACTGTTCTCCATGCTGGCTGTGTTGCCAAGATCAACCCTGCTGCCCCACTTGACAAAGTTGCTGTTGTCAGTTGTGGATTTTGCACAGGTTTTGGTGCTACTGTAAATGTTGCAAAACCAAAGCCTAATGATACTGTTGCTGTCTTTGGATTAGGAGCTGTTGGTCTTGCTGCCTGCGAAGGTGCAAGAGTTTCTGGTGCATCTAGAATCATTGGGGTGGATTTACTTCCCAATCGATTTGAACAAGCCAAGCAATTTGGGGTCACTGACTTTGTGAACCCGAAAGATCATAACAAACCAGTACAACAGGTCATTGCTGAAATGACTGATGGAGGAGTAGATCGTGCTGTTGAATGCACTGGAAGCATCCAAGCTTCGATCTCAGCATTTGAATGCACTCATGATGGTTGGGGTGTTGCTGTACTTGTTAGTGTGCCAAAGAAAGATGTTGAATTCAAAACTCATCCTATGAATTTCATGGAAGGGAGAACTCTTAAGGGTACCTTCTATGGCCACTTCAAACCACGCACTGATATTCCTGGTGTTGAGTTGGAACTGGACAAATTTATCACTCACACCGTGCCATTCTCAGAGATCAACAAAGCATTTGACCTTATGCTGAGAGGGGAGGGCATAAGGTGCATCATCCGCATGGAAGAGTAAACCAATGATGTTCTCTTCAGCTATGAGAACAGTGTTTGTGTGTATTGTGAAAATGAATAAATTTGGCATGTACGTAATTCATGCTATATGAGTGTCTAACGAGGTGATGGTGGTGATGACTTTCATGGTCATTTTCATGGCTCTGTGTATGTCGAATGTTGTCTTGTAACTTTGATCTATTTTAAGCTATATATATATATATATATATATATATATATATATATATGATTGTATCTATGTTCCATCCATATTAAAAATAGATTGCATCTCTCACCCCTCTAAGTTAGGTAACATTTGACAGTTTAATTATCAGTGAGTGTATTTGAATTGGCAGAAGAAATCTACATTAAGATAAAATCACAGTTAGACTATCAAGAAAAAGTTCCTTTCTCGGCAGAAGTGAATAAACAAATATATTTAAATGCATTCGCGTTAAAAATGTTAGTTGTATGTGTCCTTACATTAAAAAAAACACTTAAGTTCATTAATTTCAAGTGAAATATTAAACTATGAATTTAATTGGTATACATCCTGAATTCAAT 1720 0.3994 MSSTAGQVIRCRAAVAWEPGKPLSIETIEVAPPQKGEVRLKILFNSLCRTDVYWWDAKGQNPLFPRILGHEASGIVESVGEGVTNLKPGDHALPIFTGECGECKYCKSEESNLCELLRINTDRGVMLSDGKTRFSKNGQPIYHFVGTSTFSEYTVLHAGCVAKINPAAPLDKVAVVSCGFCTGFGATVNVAKPKPNDTVAVFGLGAVGLAACEGARVSGASRIIGVDLLPNRFEQAKQFGVTDFVNPKDHNKPVQQVIAEMTDGGVDRAVECTGSIQASISAFECTHDGWGVAVLVSVPKKDVEFKTHPMNFMEGRTLKGTFYGHFKPRTDIPGVELELDKFITHTVPFSEINKAFDLMLRGEGIRCIIRMEE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01994 373 Gene3D - 19 363 - -
Pste8g01994 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 333 IPR036291 -
Pste8g01994 373 SUPERFAMILY GroES-like 4 187 IPR011032 -
Pste8g01994 373 FunFam Alcohol dehydrogenase class-P 183 321 - -
Pste8g01994 373 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Pste8g01994 373 SUPERFAMILY GroES-like 336 370 IPR011032 -
Pste8g01994 373 FunFam Alcohol dehydrogenase 6 14 196 - -
Pste8g01994 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Pste8g01994 373 CDD alcohol_DH_plants 9 370 - -
Pste8g01994 373 Gene3D - 183 321 - -
Pste8g01994 373 PANTHER ALCOHOL DEHYDROGENASE 6 369 - -
Pste8g01994 373 Pfam Zinc-binding dehydrogenase 206 328 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01994 Pste-Chr8 15827248 15834124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01994 1 363 Monolignol Biosynthesis Gene Families AT1G72680 25.806 8.24e-17 79.0