Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01990 ATGTTCATCTTACAATTTTTCTTAATTGTAGACGATGAATCCCTGTCCTCTACATCTACCTGTTCAGGTTTGGCTTCCAAAAGAGCTTATATTCCAAAGAGATTAGTGATTGGAAATGATGAATATGTCCAAATTGGCAATGGTAACCAGCTTATCAGAGACCCGAAGAAACGAAGTCGAAAATTAGCAAATGAAAAAGTTAGATGGAGCTTACACACTGCCAGACAACGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACTAGGTTTGGAAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATTCATGATCCCTCAAAAATCGCAGTCTGTACCAAGTTCTTGAATGGTTTATGTTCTACTCCCAACTGCAAATTGACACACAAGGTTATTCCAGAGAGAATGCCAGATTGCTCTTATTTTTTGCAAGGTTTATGCTCTAACAGAAATTGTCCATACAGACATGTCAATGTGAACCCTAAGGCTTCTGTTTGTGAAGGATTTCTCAAGGGTTATTGTGCAGATGGGGATGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTACTTTTGAAGCAACAGGAACCTGTACTCAAGGAACAAAATGCAAACTTCATCATCCGAAAAAGCAGAGCAAAGGAAAGAAAAGGAAGAGATCTGGAGATCAGAACAGTAGGGGGCGTTATTTTGGTTCTATTCCTGCTGATATTTCTGAATCTGGGATGATGGTTGCTCTAAATAGACATAAACAGAGTGGTGAACATGAAGAGGAATTTTCTGACTACATCAGCCTTGATGAGAACGAAGAAGTTGCAGATACTGTCGATCAATCATTTGAGACAGCATCATTCTGTGACAATGATTCCTTGGATATGCAAATGGATGATTTTGATGAACTCATTAAACCTGTTCTTCTACTGAAAAAGTTTACATCGCAATCACCTCAATTCCCTAGCCTCCAAGCTTTAGGCAAGTTGCAGACCTAGGTTGTTGTAAATGAGGTAATTTAGGTAATGCAGAGCCCGCTTCTCCCCCCTTCAATTTTTTTTTTTGTCATTTATTTTGAATGCATAGCTTAATGTAAAAGGTCATCCTCCCCCCCCTTCATTTTTTTTTTTTGGATTTTTATAATTGTACAATAACATCTTGGAATAATAGATTCTTAATTTGTTTCTCTGATTAGTGCTAGTGTGC 1198 0.3831 MFILQFFLIVDDESLSSTSTCSGLASKRAYIPKRLVIGNDEYVQIGNGNQLIRDPKKRSRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCSNRNCPYRHVNVNPKASVCEGFLKGYCADGDECRKKHSYVCPTFEATGTCTQGTKCKLHHPKKQSKGKKRKRSGDQNSRGRYFGSIPADISESGMMVALNRHKQSGEHEEEFSDYISLDENEEVADTVDQSFETASFCDNDSLDMQMDDFDELIKPVLLLKKFTSQSPQFPSLQALGKLQT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01990 329 MobiDBLite consensus disorder prediction 204 223 - -
Pste8g01990 329 Gene3D - 106 161 - -
Pste8g01990 329 MobiDBLite consensus disorder prediction 201 235 - -
Pste8g01990 329 FunFam Zinc finger CCCH domain-containing protein 7 162 223 - -
Pste8g01990 329 ProSiteProfiles Zinc finger C3H1-type profile. 161 188 IPR000571 GO:0046872
Pste8g01990 329 FunFam zinc finger CCCH domain-containing protein 3 109 160 - -
Pste8g01990 329 ProSiteProfiles Zinc finger C3H1-type profile. 79 108 IPR000571 GO:0046872
Pste8g01990 329 Gene3D - 162 225 - -
Pste8g01990 329 PANTHER CCCH ZINGC FINGER 11 309 - -
Pste8g01990 329 SMART c3hfinal6 79 107 IPR000571 GO:0046872
Pste8g01990 329 SMART c3hfinal6 108 132 IPR000571 GO:0046872
Pste8g01990 329 SMART c3hfinal6 161 187 IPR000571 GO:0046872
Pste8g01990 329 SMART c3hfinal6 188 210 IPR000571 GO:0046872
Pste8g01990 329 SMART c3hfinal6 134 159 IPR000571 GO:0046872
Pste8g01990 329 ProSiteProfiles Zinc finger C3H1-type profile. 134 160 IPR000571 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01990 85 214 C2H2 Transcription Factor Family AT2G32930 31.852 4.13e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste8g01990 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01990 8 15744562 15746574 Pste8g01990 8 15744562 15746574 ECH