Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01988 CCAAAACTGAAACCAAACATTGCTCCAACCTCCGAAGCCTCTCTCTCTCTCTCTCAAACTTTTATGTCATGACTCATGCGCCTGACATAGAAGGATTCACGAACTGCGATCACCGACAACAAAAGGACAACGTACGATAATAACAGACTCCGAGGATGAAAATGCTGCCACATGTCACCGCCGCAGAGTCCGGTAGCCGCACGGTGGTGGTGGGAGTGAAGATGGACTCTCACAGCACCGAGTTGCTCACTTGGGCTCTGTTCAAAGTGGCTCAACCCGGTGATCTTGTGCTTGCTCTTCACGTTCTTGGGAATGGCGAAATTGTGAATCGAGATGGGAAATCCTCTCTGTTTTCGCTTGTCAGAGCATTTGACTCTGTTCTCGCAGTTTATGAAGGATTCTGCAATTTGAAGCAGGTCGTGGATCTTAAACTGAAAATATGTCGGGGTTCATCAGTGAGGAAAATTTTGGTTCGAGAAGCAAATGCTTATTCTGCAACGCACATCGTAGTTGGAAGTCCACATGGCCTTCATAAGATTCGGCCATGTATATCTGTAGCAAGGTACTGTGCTAAGAAGTTACCAAAGGATTGTTGGGTTCTTGCTGTTGATAATGGGAAAGTTGTGTTCAAGAGAGAAGGGCCACCAGCTACTCGTGCTGACTTAAAAGGACTTGATGGGGATCACAAAAATGGGTTGCTAGGTTCGGTTCATAGGACACTTGGGAAGAGTTCTAAAGTACTAGATGATGGTGGTAGAGAGATGCATGAAAAGGTTAGGGGTCAATTTTCAGATCACAGTTTGGCTAAAGCTTTTCTGGATTCTACAGAGTTCAATGGGAAGAAGAGGTGCTCTATTTGCGATTCAACGCCATCATTGTTTGATTCATCTTGTAACCATTCAGAAGAAGAGTCTTGTGATGCTTGTGAGGAGAAGAACCCTTTGGCAATAGTGCCTGTGCAGACCAATGATGCTGCTTCTAAACCGGGTTGGCCACTGCTTCGAAAGACAATTGTATCTGACAAGAAATGTTCTGAAAGATCAATGTATCGCCAGATCTCTGTGGTACAATGGGCAATGCAGTTACCCTCTAGAAATCTTTCATATGCTGCAAATCAAGATCATAAAACAAGCAATTTTGGCCTAAATAATAGTCAGGTTTTGACTCTAGATAGCAACAGTGGTGCTCTTGTTCCAGTGAATGCTGAAATAGGAAGAACCTCTTCGCCTCAACACAATTCAAGAAGCATTCCTAAGGAATTGGAGGGCCTGCATGAGAAATACTCATCCACTTGCAGATTGTTTAAGTACCAAGAACTTGTGCTAGCAACATCAAATTTCTTGCCAGAAAATTTGATTGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGTTGCCTTCCTGATGGCAAAGAACTTGCTGTTAAGATCTTAAAGCCATCTGATGATGTTTTAAAGGAGTTTGTTCTAGAAATAGAAATTATCACTACCTTGCATCACAAAAACATTATTTCCCTCCTTGGATTCTGCTTTGACAGTGGCAATCTTCTTTTGGTCTATGATCTCTTGTCAAGAGGAAATCTTGAAGAGAATCTCCACGGTAATAAGAAAAATCCAGTTTTGTTTGGTTGGACCGAGAGATACAAGGTGGCAATGGGTGTTGCTGAGGCTTTGGAGTATCTGCATAAAAATGAAGGCCAATCTGTGATCCATCGCGATGTAAAATCATCAAATGTGTTGTTATCTGAGGATTTTGAACCCCAGCTATCTGACTTTGGACTAGCTAAATGGGCATCAACCTCATCGACACACATAATCTGCACAGACGTTGCTGGAACCTTTGGTTACATGGCTCCTGAATACTTCATGTATGGTAAAGTAAATGACAAGATTGATGTCTATGCATTTGGTGTTGTTCTTCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAGTGGTGATTATCCCAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAATTCTTAATAGTGGGAAGGTGTTACAATTGTTAGATCCTAGTTTGGGTGATAACTATAATCATGAAGAGATGGAAAGGATGGTCTTGGCTGCTACTCTTTGTATCAGACGTGCTCACAGAGCTAGACCTCAAATGAGCCTTATCTCTAAGCTCCTTGGGGGTGATGCTGAAGTGCTCAAGTGGGCGAGACTAGAAGTGAATGCCTTAAAAGCACCAGAACTGCTTGATGATGAAGCTTGTCCACCATCCAATTTGCAGTCACATCTTAACCTTGCACTGCTTGATGTGGAGGATGACTCACTCTCCATGTGCAGTCTAGAGCAAAACGTCTCATTGGAGGACTACTTGAGAGGCAGGTGGAGCCGTTCATCAAGCTTTGATTGATTAAGCAAATTGCAAGAGAAGAAGGATTGTGTTTTTAAATCTAAATCCTTAATTTGTAGATAATTTTGCTGTGTTGCATCTTCCACTTTGTCTTTGGCATGTGCTGTGGAAGTTTACAGATGGGTTTAGGATGAGAGGTTGTTTGTGTGTACCCTCCTCCTTTACCTTGATTTTTAAGAAAACTAAGCCTTGTAATTTGTGAGGCAAGGTACACTTTGTCTTTCTACTTCAATTGGTGCCGTTTCAATGCTTAATCTCAATTTATTTTTCTGGTGCTCAAAATAAAAGATGACAAAGTTGTATCTTAACACTACATAAGGATTACTGTTTTGTGCATTAAGTTATTGGCAACTTCTTTGATGTGTGCA 2749 0.4205 MKMLPHVTAAESGSRTVVVGVKMDSHSTELLTWALFKVAQPGDLVLALHVLGNGEIVNRDGKSSLFSLVRAFDSVLAVYEGFCNLKQVVDLKLKICRGSSVRKILVREANAYSATHIVVGSPHGLHKIRPCISVARYCAKKLPKDCWVLAVDNGKVVFKREGPPATRADLKGLDGDHKNGLLGSVHRTLGKSSKVLDDGGREMHEKVRGQFSDHSLAKAFLDSTEFNGKKRCSICDSTPSLFDSSCNHSEEESCDACEEKNPLAIVPVQTNDAASKPGWPLLRKTIVSDKKCSERSMYRQISVVQWAMQLPSRNLSYAANQDHKTSNFGLNNSQVLTLDSNSGALVPVNAEIGRTSSPQHNSRSIPKELEGLHEKYSSTCRLFKYQELVLATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFVLEIEIITTLHHKNIISLLGFCFDSGNLLLVYDLLSRGNLEENLHGNKKNPVLFGWTERYKVAMGVAEALEYLHKNEGQSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSTHIICTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISGDYPKGQESLVMWASPILNSGKVLQLLDPSLGDNYNHEEMERMVLAATLCIRRAHRARPQMSLISKLLGGDAEVLKWARLEVNALKAPELLDDEACPPSNLQSHLNLALLDVEDDSLSMCSLEQNVSLEDYLRGRWSRSSSFD 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01988 741 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
Pste8g01988 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Pste8g01988 741 Gene3D Phosphorylase Kinase; domain 1 358 469 - -
Pste8g01988 741 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 364 469 - -
Pste8g01988 741 FunFam Putative receptor-like serine/threonine-protein kinase 470 682 - -
Pste8g01988 741 SMART serkin_6 395 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01988 741 Pfam Protein kinase domain 399 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01988 741 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 148 - -
Pste8g01988 741 ProSiteProfiles Protein kinase domain profile. 395 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01988 741 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 14 152 - -
Pste8g01988 741 CDD USP_Like 16 148 - -
Pste8g01988 741 SUPERFAMILY Protein kinase-like (PK-like) 376 664 IPR011009 -
Pste8g01988 741 Gene3D HUPs 6 153 IPR014729 -
Pste8g01988 741 PANTHER OS08G0249100 PROTEIN 237 674 IPR046958 -
Pste8g01988 741 Gene3D Transferase(Phosphotransferase) domain 1 470 674 - -
Pste8g01988 741 Pfam Universal stress protein family 15 148 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01988 Pste-Chr8 15720264 15724536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01988 382 662 Trihelix Transcription Factor Family AT1G68690 46.503 1.54e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste8g01988 Pkinase 3.5e-43 CL0016