Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01985 ATGGCTAGTGTGATGCTCCCGATACTGTTACTGTTAATGGTTCTTGTTATCAAAAGTGGCAGCGTTGAGAACGAGTGCGAGGAACTGTGGTGTGGGTCTCAAGCGATTAGATTTCCCTTCCAACTGGTGAAGGGGATGCACGAGACATGTTCTTATCCCCGTCTCTGTGTACATTGCACTGAACATAATGACGCCATGCTTCTGCTCCCTACAATGAAACTCCTAGTCAGGGATATAAGCTACCGCAGCAACCAAATTGCGTTGACTCATGACCCGGACGAAGATTGCTTTCTGAAGAAGTTTTCACAGATCAACGATTTTGTTCAGCGTTATCAATTTGAATCAACATATTATGGACCTCGAAACAACTTGAGCTTCCTGAACTGCTCTTCAGGAGACATGTGGAAGTCCTGTCCTATTTTGGTTTCTAATTCTGGCAGCAGTGTCCTCTATTGGAATATGGATATAACATCCTGTACCAAGATGTTTGACACCATTTCACCACTTGACCCTTACAGCCTGCAGGTTAATTTGTTGGAGTTGAGATGGTCCAAACCAGATTGTACCAAGTGCGAAACAGAAGGCAAGAGATGTAGATGGAAGATCAACGCCACCACACAATCAGATATCCAATGTTTTCACTGCAAAAGCAAAAGGATCCACGTTCCCAAATCTTTCATTTTCTCTACTGCAGGTTGGATTCTTTTGGGATTGGGGGTCATTATTGTCTTTAAGATCATTTACCATTTTAAAGAGAAAGAAGAAGATCAGGTAAGATTGGACAAGTTTTTAGAGGATTATAGAGCAGAAAAGCCTACAAGATTTACCTATGCTGATCTAAAAAGAATCACTAATGGCTTTAAAGAAAAGTTAGGGGAAGGAGCTCATGGGAGTGTATTTAGAGGAAAACTTTCGAATGAGATTTTAGTGGCTGTGAAGATTCTCAATAAGACAGAGTCGGAAGGAAATGAGTTCATTAATGAAATGGAAATTATGGGAAAAATCCATCACATAAATGTTGTTCGTTTGCTTGGCTTTTGTGCAGAAGGACTGTATCATGCTCTTGTATACCATTTGTTTCCTAACGGTTCCCTTCAAATCTTCATATTTCCACCTGATGACAAGGATAATTTTCTTGGTTGGGAGAAGTTGCAATGCATTGCTCTAGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGTAATCATCCTATTATTCACTTTGACATCAATCCATGCAATGTGTTACTTGACTGCAATTTCACTCCAAAAATCTCAGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCTAGTTTGGTATCCATGACAACTGCTAGAGGAACCTTGGGATACATTGCACCTGAAGTTTTCTCTAGAAACTTTGGAAATGTGTCTTACAAGTCTGACATTTATAGTTATGGCATGTTATTGCTAGAAATGGTTGGAGGAAGAAAAAATGTAGACTTGTCTTCTGCACAAAATTTTAATGTTTTGTACCCAGATTGGATCCATAATTTGGTTGATGGCGATGTACATATCCATGTTGAGGATGCAGGTGATGTTAAAATTGCGAAAAGACTAGCAATTGTAGGACTTTGGTGCATTCAGTGGCATCCAGTGAATCGTCCATGCATAAAGTCTGTTATACAAATGCTAGAAACCAGAGAAGAAAATCAATTAAATATGCCTCCTAATCCATTTCACTCTGTCACTTCCGTTACTACTAGGGGACTTACTTTGGCAAGACTGCAGACTATGGAGTTGGAAGTGATTGAAGAATGA 1788 0.3965 MASVMLPILLLLMVLVIKSGSVENECEELWCGSQAIRFPFQLVKGMHETCSYPRLCVHCTEHNDAMLLLPTMKLLVRDISYRSNQIALTHDPDEDCFLKKFSQINDFVQRYQFESTYYGPRNNLSFLNCSSGDMWKSCPILVSNSGSSVLYWNMDITSCTKMFDTISPLDPYSLQVNLLELRWSKPDCTKCETEGKRCRWKINATTQSDIQCFHCKSKRIHVPKSFIFSTAGWILLGLGVIIVFKIIYHFKEKEEDQVRLDKFLEDYRAEKPTRFTYADLKRITNGFKEKLGEGAHGSVFRGKLSNEILVAVKILNKTESEGNEFINEMEIMGKIHHINVVRLLGFCAEGLYHALVYHLFPNGSLQIFIFPPDDKDNFLGWEKLQCIALGIAKGIEYLHQGCNHPIIHFDINPCNVLLDCNFTPKISDFGLAKLCSKNPSLVSMTTARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDLSSAQNFNVLYPDWIHNLVDGDVHIHVEDAGDVKIAKRLAIVGLWCIQWHPVNRPCIKSVIQMLETREENQLNMPPNPFHSVTSVTTRGLTLARLQTMELEVIEE 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01985 595 ProSiteProfiles Protein kinase domain profile. 285 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01985 595 Pfam Protein tyrosine and serine/threonine kinase 287 501 IPR001245 GO:0004672|GO:0006468
Pste8g01985 595 Gene3D Transferase(Phosphotransferase) domain 1 360 568 - -
Pste8g01985 595 SUPERFAMILY Protein kinase-like (PK-like) 269 557 IPR011009 -
Pste8g01985 595 FunFam PR5-like receptor kinase 360 565 - -
Pste8g01985 595 FunFam serine/threonine-protein kinase PBS1-like 251 359 - -
Pste8g01985 595 Pfam Wall-associated receptor kinase galacturonan-binding 26 88 IPR025287 GO:0030247
Pste8g01985 595 Gene3D Phosphorylase Kinase; domain 1 259 358 - -
Pste8g01985 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 259 572 IPR045874 GO:0004672
Pste8g01985 595 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01985 Pste-Chr8 15651505 15653935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01985 203 590 Receptor kinase-like Gene Family AT4G18250 39.206 8.80e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste8g01985 PK_Tyr_Ser-Thr 7.9e-42 CL0016