Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01984 CAACAAATATGTGCTAGCAACAAGAAGCAAGAACATGGTTGTGACCCTTCTTCCTGTGGCAAGATCAGCAACATAACATATCCATTTCGATTGAAAGGAGACCCACAAGGCTGTGGAGACAGCAGGTATGAACTAAGTTGTGAAAATAATGTAACGGTGGTACATCTGTATTCTGGAAAATATCATGTGCAGGCAATAAACTACGACAATTTCACAATCCGAGTGGTTGATCCTGGAATTCAACCTTCCAATTACTCAACCCTTCCTCGATATTTCTTTTCTCCACTCAATTTCAGTGATTTGTACTACCGAACCGATTTTAGATATATAGTTTTCATGAATTGTAGCCATGGAGTGAGTGAGAATGGCAGGTATGTGGATACAGCTCCCTACATCAATTGGGAGTCCAAAGGGCACCACATATACGCTATTGCTGGTGACTTAAAAGCAAGGGACATTGAAGTTGGTTGTAAAGTAAAGCTGGTTGCTGCCACATCTTGGTGGGGTTTGGACACAAATAAATATTCCTACTCATACACTGCCATGCACATGGCTCTACTCTATGGATTTCAGATTTCATCGGTGCATCTTGCCTGTGTGGATCTTTGTGAAGAAAGTATGTGCTATTTCGACCCTTCCAGCCAGACCCTTCAATGCTGGCCCCAGCTGAAAGTTATTGCTGATGTCTTGACAGGAATATTTAAAATAGTAGACGGGCCAAGACTAAAAGCTGAAAGTGATTACACTGTGTATGATTTAGCATTTATTTCCCTGGGACAGTGTGTTCTACCATACTTGGCAGGCAGGTATTTGTTAGGAATGACATTGTTTATTGCTCTTCTGATATACAAACGGAGAAACAAACATTTGTCAATGTATGAAAATATCGAAAATTATTTGGAGCAAAATAACTTGATGCCTATTAGATACTCATACAAGGAAATTAAGAATATGGCTAAGGGTTTTCAAGACAAACTCGGGAAAGGAGGTTTTGGCTCTGTGTTTAAGGGAAGGCTACGAAGTGGGCCTATTGTGGCAATAAAAATGTTGGACAAATCAAAAGGTAATGGACAAGATTTTATCAATGAAGTTGCAACAATTGGAAGAATACATCATCAAAATATAGTACAATTAATTGGATATTGTGTTGAGGGTAAAAAACGTGCTCTTGTTTATGATTTCATGTCCAATGGATCTCTGGATAAATTTCTTTTTTTCAAAGATGGAGGTATGCATCTAACCTATGATAAAATATATAATATAGCAATTGGAGTAGCTCGTGGAATTGCTTATCTCCACTGTGGATGTGAGATGCAAATTTTACATTTTGATATCAAACCACACAATATCTTACTTGACGAAAATTTCATCCCAAAGGTATCTGATTTTGGATTGGCAAAGTTATATCCAATAGATAACAATATTGTCACCATAACAGCAGCAAGAGGGACAATTGGATATATGGCTCCAGAATTGTTTTATAAAAATATTGGAAGAACATCCCAAAAGGCTGATGTTTACAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTAAGAGAAAAAACCTTAATCCTCTTGCAGAACACTCAAGTCAACTTTACTTTCCCTTGTGGGTATATGGTCAACTTGAAAAAGAGAAAGATATAGAAATGGAAGACGGTTCTTTGGAGGAAAAGCAAATAGCAAAAAAGTTGATCATAATTGCTCTTTGGTGTATACAATTAAAACCAGATGATCGTCCCTCAATGAATAAAGTAATAGAGATGCTTGAAGGAGAAATTGAAAGCATAGAAATGCCCCCTAAACCTTCTTTATATCCAAATGAAATGGCAATAGAAGATCAAAGTAGTGACTTCATTAGTTCTTCTAGTTATTCCACA 1881 0.3721 QQICASNKKQEHGCDPSSCGKISNITYPFRLKGDPQGCGDSRYELSCENNVTVVHLYSGKYHVQAINYDNFTIRVVDPGIQPSNYSTLPRYFFSPLNFSDLYYRTDFRYIVFMNCSHGVSENGRYVDTAPYINWESKGHHIYAIAGDLKARDIEVGCKVKLVAATSWWGLDTNKYSYSYTAMHMALLYGFQISSVHLACVDLCEESMCYFDPSSQTLQCWPQLKVIADVLTGIFKIVDGPRLKAESDYTVYDLAFISLGQCVLPYLAGRYLLGMTLFIALLIYKRRNKHLSMYENIENYLEQNNLMPIRYSYKEIKNMAKGFQDKLGKGGFGSVFKGRLRSGPIVAIKMLDKSKGNGQDFINEVATIGRIHHQNIVQLIGYCVEGKKRALVYDFMSNGSLDKFLFFKDGGMHLTYDKIYNIAIGVARGIAYLHCGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNNIVTITAARGTIGYMAPELFYKNIGRTSQKADVYSFGMLLMEMASKRKNLNPLAEHSSQLYFPLWVYGQLEKEKDIEMEDGSLEEKQIAKKLIIIALWCIQLKPDDRPSMNKVIEMLEGEIESIEMPPKPSLYPNEMAIEDQSSDFISSSSYST 627
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01984 627 Pfam Wall-associated receptor kinase galacturonan-binding 14 77 IPR025287 GO:0030247
Pste8g01984 627 SUPERFAMILY Protein kinase-like (PK-like) 305 591 IPR011009 -
Pste8g01984 627 FunFam PR5-like receptor kinase 395 602 - -
Pste8g01984 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Pste8g01984 627 Gene3D Phosphorylase Kinase; domain 1 293 394 - -
Pste8g01984 627 FunFam serine/threonine-protein kinase PBS1-like 288 394 - -
Pste8g01984 627 Pfam Protein kinase domain 324 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01984 627 SMART serkin_6 320 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01984 627 PANTHER RUST RESISTANCE KINASE LR10-RELATED 293 610 IPR045874 GO:0004672
Pste8g01984 627 Gene3D Transferase(Phosphotransferase) domain 1 395 605 - -
Pste8g01984 627 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Pste8g01984 627 ProSiteProfiles Protein kinase domain profile. 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste8g01984 Pste-Chr8 15643044 15651206 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01984 3 606 Receptor kinase-like Gene Family AT5G38260 35.612 1.07e-112 350
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste8g01984 Pkinase 2.1e-47 CL0016