Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01982 ATGATTGAGAATATTGTCAAAGATATAGAGCAAAAGCGACAGCAGAAATACCCTAATGAACAAAAAGACCTCGTAAATGAAGAAAATGGGAAAAAAGTAAAATCATTGCTAGAAACAAATCAAGTCGTAGGAATTTGGGGTGTGCCTGGAATTGGTAAGACAACTATTGCTAAAAACTTGTTTGCCAAAGCGTTTCCTCGATATGATTACGTCTGCTTCGTGGCCAATGCAAAAGAATATTCGCCTGAAATGCTTTTATCTGAACTATTGAGGGAGGATGTTTCTACATCAAATGATGTTTATGTGAGTAATAGGCTCAGTGGTAAAAGTGTTCTCATTGTACTTGAAGATGTTGATATGGATAGCATAGGCCTGTTAAAGAAAGTTTATAAATATGTAACATCTCCTGACATAGGTCCCAAAAGTAGACTCCTTGTAACAGCAAGAACGAAGCACTGGCTTGATGGAATAGTTGATGAGATATACAGGGGAACTAATAAAATTGAAGGAATAATATTAGATTTGTCTCTAATCACTGATTTGCCTTTGCGTGCTGACACATTCACAAAGATGGAAGCCTTGAGATTTCTTAAATTCCATAACACCAGCTTGGCTCAGAAATATTGTAATACATATCCAAACCTTCCTGCAACTCTTGAGTCATTTTCTGATAAACTGAGGTACATTGAGTGGACTGGATACCCTTTTGAGTCTCTTCCATCATCTTTTAATGCCAAGTTTCTTGTTGAGATTCACATGCGACAAAGCAAGGTTAAAGAACTTTGGCAAGAGATCCAGGAACTTGGTAATTTAGAGGTAATTGACCTAAGTGAAAGTAAACAGCTTGAAAAGCTTCCAGATTTGTCTGAAGCACCAAAACTTAAATGGGTGAATCTTTCCAGTTGTGAAAGTTTATGTGATCTAAATCCATCTGTTTTGTCCTCCGACAAGCTTGTTACTTTGATACTGGATTGGTGTACAAAACTTCAGACAGTTAAAGGTAAGAAGCATTTAGAATCTCTAGAGAAGATTAGTGTTAAAGGCTGCTCAAATCTGCAAGAATTTGTAGTGTCATCAAATTTAATTGAAAATTTGGATCTGAGCAATACAAAAATCCAAATACTGGACACATCAATAGGACATATGAAAAATCTTAAATGGCTCAATCTAGAGGGTTTAAAACTCAAGTATTTTGTAAAGGAATTATCTTACTTGACATCTCTCACGGTGCTGAAGCTTTCTGATACTTGGGATGTAATTGACAAACAACAACTACATGTCCTTTTTAAAGGGTTATGTTCCCTAAAAATACTACACATGAAAGATTTTAGTAACTTGTTTGATCTCCCCGACAACATCAGTGACTTATCAAAATTACAAGAACTAAGGCTTGATGGAAGCAATGTGAAAAACTTGCCTGAAAGCATTAACAAGCTTGGAATCTTGGAAATTTTGTCCTTGGAGAATTGCAACAATCTTCAGTCGATACCAATGCTTCCATTCTCCATCAAACACTTAGGTGCCATTAACTGCACATCATTGGTGACAGTGTCAAACTTGACTTGGGCGACAGAGATGAGGGGAATGAACAAACTCATTACATTCAAGAACAACTTGATATTGGATGGACGTTCACGCAAACATATTGCAAAAATCCTCCAGTTAGCAATGGTGCATGCTGTATTTCACAATGAGAGAAGTAGACAAGTATCCACTCATGGTTACAACTATAGCAGTGTTCAGCTTTGTTTACCAGGAAGCATGATCCCAGAAAAGATCAAATATCAAAACCCTAAGTCTTCCATTACCGTTGAACTTCCCAAACGCTCCAAGTTGTTGGGCTTCATTTACTCAGTGGTTCTTTCTTCTAATGGTGGAGAGAAGAAGCATGGCAGTAAGATAAAGTATACATGTTGTTTTCCAAAAAAAGGCAAGAAGGAAGACACATGGTTAGATCATGATATCGGGGGATTGAAGACAGATCATGTCTATGTATGGTATGATCCTTTCCACTGTGACACCATTCTGCGATATTATGAACCAAATGTTTGTTTTGAGTTCTGTGTTGCAAATGATGAGGGGGATGTTGATGATTCTATCTTTATTCAAGAGTGTGGGGTTCGCATTATAGGCATTTTAGACGCAAAAGACATTTTACAAAACTTGAAGTTGGGTAAATATATGGAAAGTAGCTTGGTGAAGAGAGTGGAGACAGAAACAGGACAAAGTATAGCAACCTTCTTATCAACTGAAAGCTCTGAATCATCTGATGAGGAGGAAAGCAGCACATCTCATAGTATAGTCGAAGAAGCAAAGGTCGCCGGGAAAGAAGAGCATTGGAAGAGCAAAGAGGTAGCAGCAGCAACCCTCAACACCTTGAGAAAAAGAAAAGAAGTTGAATCCAAATCAACTATAGTGAAAAATAAATTTGAAAAAACACCTATTCAACAAGAAATAAAGTCTGAAAAAGAACCTACCACTATTGAAGCTAAGTCTGTTCTGTATTCAAGTGATCAAGAAGATCAAACACAGGCCAAAAAATCTCAAAAGATATTGGATACCACGACCAGAGAACCAAGTCCCTCGTCATCAGCATTTGTGAATGTTGATATTGAAACTGTTTCAGAACTAGCCCAGGAAAAACATCCACCACAAGACCAGCAGGTAATTTCAAAATCTTGA 2682 0.3729 MIENIVKDIEQKRQQKYPNEQKDLVNEENGKKVKSLLETNQVVGIWGVPGIGKTTIAKNLFAKAFPRYDYVCFVANAKEYSPEMLLSELLREDVSTSNDVYVSNRLSGKSVLIVLEDVDMDSIGLLKKVYKYVTSPDIGPKSRLLVTARTKHWLDGIVDEIYRGTNKIEGIILDLSLITDLPLRADTFTKMEALRFLKFHNTSLAQKYCNTYPNLPATLESFSDKLRYIEWTGYPFESLPSSFNAKFLVEIHMRQSKVKELWQEIQELGNLEVIDLSESKQLEKLPDLSEAPKLKWVNLSSCESLCDLNPSVLSSDKLVTLILDWCTKLQTVKGKKHLESLEKISVKGCSNLQEFVVSSNLIENLDLSNTKIQILDTSIGHMKNLKWLNLEGLKLKYFVKELSYLTSLTVLKLSDTWDVIDKQQLHVLFKGLCSLKILHMKDFSNLFDLPDNISDLSKLQELRLDGSNVKNLPESINKLGILEILSLENCNNLQSIPMLPFSIKHLGAINCTSLVTVSNLTWATEMRGMNKLITFKNNLILDGRSRKHIAKILQLAMVHAVFHNERSRQVSTHGYNYSSVQLCLPGSMIPEKIKYQNPKSSITVELPKRSKLLGFIYSVVLSSNGGEKKHGSKIKYTCCFPKKGKKEDTWLDHDIGGLKTDHVYVWYDPFHCDTILRYYEPNVCFEFCVANDEGDVDDSIFIQECGVRIIGILDAKDILQNLKLGKYMESSLVKRVETETGQSIATFLSTESSESSDEEESSTSHSIVEEAKVAGKEEHWKSKEVAAATLNTLRKRKEVESKSTIVKNKFEKTPIQQEIKSEKEPTTIEAKSVLYSSDQEDQTQAKKSQKILDTTTREPSPSSSAFVNVDIETVSELAQEKHPPQDQQVISKS 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01982 893 Gene3D Ribonuclease Inhibitor 158 358 IPR032675 -
Pste8g01982 893 Pfam C-JID domain 584 710 IPR045344 -
Pste8g01982 893 Gene3D Ribonuclease Inhibitor 359 540 IPR032675 -
Pste8g01982 893 Pfam Leucine Rich Repeat 247 266 IPR011713 -
Pste8g01982 893 SUPERFAMILY L domain-like 174 521 - -
Pste8g01982 893 PRINTS Disease resistance protein signature 105 119 - -
Pste8g01982 893 PRINTS Disease resistance protein signature 266 282 - -
Pste8g01982 893 PRINTS Disease resistance protein signature 42 57 - -
Pste8g01982 893 MobiDBLite consensus disorder prediction 748 768 - -
Pste8g01982 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 226 IPR027417 -
Pste8g01982 893 Gene3D - 6 157 IPR027417 -
Pste8g01982 893 Pfam NB-ARC domain 39 151 IPR002182 GO:0043531
Pste8g01982 893 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 168 355 IPR044974 GO:0006952
Pste8g01982 893 MobiDBLite consensus disorder prediction 816 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01982 Pste-Chr8 15635283 15639411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01982 149 462 WRKY Transcription Factor Family AT4G12020 32.822 2.80e-29 124