Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01976 AATCTACAACCACACGATGCTACTTTTTCTTCCACTGTTCATGTCCCTCTTCACATCTGGTTCTGCATCTAGCTCCTCATCATGCCCCATGGATCTCAGCTATGTTAATTCCATTCGCTGGAACACTTCAATATGCCAATACCCAAGTGAAAAAGATCAGTGTTGCAGAACACTGCTTAGTGTCTTTGCCATTGGTCTTGCTCAACGCCTCAGTGAAAGTTCCAATTTTTACCTTCCTGATGTAAACACTTCCATCTCTTGCTTCAAAACAAGTCCATACCACAAAACCTGGTCCATTATTGCTTCCCTGACCCAACAAGGTATTAGAACTAAACGTGATTGGGTGCAAAAGGTGGGAAGGGTTACCCCATTGGACACAGCTTGCTATGGGGACCTCAAAGACAAAGCACGTTGCACAGTTTGCACTGATGCTGCTTACAAAGTCAATTCCACGCTCACAAGTATTGACCCAAATGCTAATCCCCAAAAATGTTTTTACTACATAGTGTTGTATGCTGCTGTTGTTAGCAAGTTTGGTACAACTGATGTAAGCACCACATCTTGCATACTAGGCTTAAGGCAAGTGGGTAGTGTGGAGACAAAAGGGTCAAGGAATAGAAAAGACGTTTTGAAGGTTAGTTTTGCTTTGTTGGGTGTTCTTATTGGTGTTGTGGTTGGTTTTTTGGTGATTGTTGTGTATAGGAAATGGGATATGAGAAGGAAGGAGAAGATTTATCATAGGGAGATTGAGAACAAGGTGAGGGGTGGTGTTTTGCCTAATGTTGGTGCTAAGTGGTTTCACATATCTGAGCTTGAACGTGCCACTAATAGATTCTCGCGGAGGAATGTGATTGGTCAAGGTGGTTATGGGGTTGTGTACAAAGGGACTCTTTCTGATGGTGTTGTGGTTGCTGTTAAGGAGATTTTTTATTTGGAGGCTAAAGGGGATGAAGATTTCTGCAATGAAGTGGAGATCATAAGCAAAATGAAGCACAGGAATATTCTTGCTCTAAGGGGTTGTTGCGTTGAAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTGATTTATGATTTTATGCCCAATGGTAGCTTAAGTGATCAATTGTGTTTTGGAGTTACTAATAGGCTAACATGGCTACAGAGAAAGAACATAATCCTTGATGTGGCTAGGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCATCGTGATGTGAAGGCTACTAACATTCTTTTGGATTCCAAAATGAATGCTAAATTGGCAGATTTTGGGTTGGCCAAGCAAGGTAGTGAGGATCAGTCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTATGTGGCACCAGAATATGCTCTATATGGGCAACTAACTGAGAAAAGTGATGTGTATAGTTTTGGTATTGTGATTCTTGAAATCATGAGTGGAAGAAAGGTGCTTGATACGTTGAGCTCATCTCCAGAATCAATTACTGATTGGGTATGGACTCTTGTGGAATCCGGAAAGATGAGGGAAATATTTTGTGAATCAATAAGAGAAGGGCCAGAAAAAAATATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCATGTGGTAGTGGCAATAAGGCCTACTATTATTGAGGCCCTTAAGATGTTAGAGGGTGACAGTGACATTCCCCAATTACCTGATAGGCCAGTACCACTGGGTCATGAGTCCTTCCGATCTTCTCTTTTGCATGCTGGCACTGCACCTTCCTCATGCCCCATGGATCTCAGCTATGTTAAGACCTTTCCTTGGAACACTTCAGTCTGCAGAGACCCCATTGATAAGCAACTTTGCTGCCAAGCTCTTTCCGGAATCTTTGGCATAGGCCTTGCTGAACAACTCAGAGAAACTTCCATATTTTATCTTCCTGATGTAAACACTTCCTCCATTTGCTTATCTGAATTCAAAGATAACCTTGCAGCCTTGTCAATCCAACCCAAGATGGTCCCTCTTTGCTTCCCTAACCCGACTCAATTAGTTACTAACTCTTCTTCATCTTGTTTAGGTATTAGAACTACACAAGATTGGAAACAAAAGGTGGGCAAGGTTACCTCATTAGACACATCTTGCAATGGAGACCTCAAAGACCAAATTCGATGCAGTATTTGCTCTGAAGCTGCCACCAAATTGACTTCCCAGCTGATCCTTATTGACCCGAATGCTACTGCTACAAATTGTTTTTTCCATGTAGTATTATATGCTGCAGCTGTTGCTAATCCATTTGGCACAACAGATCTAAGCACTACAGGATGCATACTAGGTCTGTCACAATCGTCCAGTGCAGTGACAAAAGGGTCATCAAGTAGAAGAGGAAAAGTGATCAAGCTGGTTTTTACGATATTGGGTGTTGTTATAGGTCTTGGGCTTGCTTTTGTACTAATGGTCATGTTCAAGAAGTGGGATAAGAAAAGGAAGCAAAGAGTTCATCACAGGGAAGTTGAAAATGAGGTCATGGTCAGTGTTTTGCCTAACACTGGCGCTAAATGGTTTCACATATCGGAACTTGAAAGTGCCACCAGTAAATTTTCACAGAACAATATGATAGGCCAAGGTGGTGATGGGGTTGTGTACAAAGGAACTTTTTCAGATGGCACTTTGGTTGCAATTAAGGAGATTTTTGCTTTGGAAACTGAAGGGGATGAAGAGTTCTGTTATGAAGTGGAGATCATTAGCAAAATAAAGCACAGGAATCTCCTTGCTTTAAGGGGTTGTTGCGTTTCAAGTGATAATTTGAAAGGTAAGAGAAGGTTTCTAGTTTATGATTTCATGCCTAATGGAAGCCTCAGTTACCAATTGTCAATTGTAGGGGCTAATAGGCTAACATGGCCAGAAAGAAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCACTATGAAATCAAACCCCCAATTTATCACCGTGACATTAAAGCCACTAACATACTTTTGGATTCCAAAATGAATGCTAAATTGGCAGATTTTAGCTTGGCCAAACAAGGTATTGAGAGCCAGTCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCTCTCTATGGACAACTAACTGAAAAAAGTGATGTGTACAGTTTTGGTATTGTGATTCTTGAGATCATGAGTGGAAGAAAAGTGCTTGATACTTGGAATTCATCTACTGATGCAATCACTGATTGGGTGTGGACTCTTGTTCAATCAGGAAAGATGGAGGAAATATTAGATGAGTCAATAAAAGGAGAAGGGTCAGAAAAAATCATGGAAAGGTTTGTTCATGTTGGAATGTTATGTGCTCATGCAGTAGTGGCATTAAGGCCTACTGTTGCTGAGGCACTTAAGATGTTAGAGGGTGACACTGATGTTCCCATATTACCAGATAGGCCTATGCCAATTGGTCATGCCTCCTTTCAATCTTCTCTGTTGCATGGTTTGCATATAAGTGGA 3484 0.4127 MLLFLPLFMSLFTSGSASSSSSCPMDLSYVNSIRWNTSICQYPSEKDQCCRTLLSVFAIGLAQRLSESSNFYLPDVNTSISCFKTSPYHKTWSIIASLTQQGIRTKRDWVQKVGRVTPLDTACYGDLKDKARCTVCTDAAYKVNSTLTSIDPNANPQKCFYYIVLYAAVVSKFGTTDVSTTSCILGLRQVGSVETKGSRNRKDVLKVSFALLGVLIGVVVGFLVIVVYRKWDMRRKEKIYHREIENKVRGGVLPNVGAKWFHISELERATNRFSRRNVIGQGGYGVVYKGTLSDGVVVAVKEIFYLEAKGDEDFCNEVEIISKMKHRNILALRGCCVESDNLKGKRRFLIYDFMPNGSLSDQLCFGVTNRLTWLQRKNIILDVARGLAYLHYEIKPPIYHRDVKATNILLDSKMNAKLADFGLAKQGSEDQSHLTTRVAGTYGYVAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTLSSSPESITDWVWTLVESGKMREIFCESIREGPEKNMERFVHVGMLCAHVVVAIRPTIIEALKMLEGDSDIPQLPDRPVPLGHESFRSSLLHAGTAPSSCPMDLSYVKTFPWNTSVCRDPIDKQLCCQALSGIFGIGLAEQLRETSIFYLPDVNTSSICLSEFKDNLAALSIQPKMVPLCFPNPTQLVTNSSSSCLGIRTTQDWKQKVGKVTSLDTSCNGDLKDQIRCSICSEAATKLTSQLILIDPNATATNCFFHVVLYAAAVANPFGTTDLSTTGCILGLSQSSSAVTKGSSSRRGKVIKLVFTILGVVIGLGLAFVLMVMFKKWDKKRKQRVHHREVENEVMVSVLPNTGAKWFHISELESATSKFSQNNMIGQGGDGVVYKGTFSDGTLVAIKEIFALETEGDEEFCYEVEIISKIKHRNLLALRGCCVSSDNLKGKRRFLVYDFMPNGSLSYQLSIVGANRLTWPERKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMNAKLADFSLAKQGIESQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTWNSSTDAITDWVWTLVQSGKMEEILDESIKGEGSEKIMERFVHVGMLCAHAVVALRPTVAEALKMLEGDTDVPILPDRPMPIGHASFQSSLLHGLHISG 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01976 1156 Gene3D Transferase(Phosphotransferase) domain 1 931 1129 - -
Pste8g01976 1156 Gene3D Transferase(Phosphotransferase) domain 1 354 553 - -
Pste8g01976 1156 FunFam Receptor-like serine/threonine-protein kinase At4g25390 815 930 - -
Pste8g01976 1156 ProSiteProfiles Protein kinase domain profile. 850 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01976 1156 FunFam Receptor-like serine/threonine-protein kinase At4g25390 238 353 - -
Pste8g01976 1156 Pfam SPARK 576 735 IPR043891 -
Pste8g01976 1156 Pfam SPARK 18 159 IPR043891 -
Pste8g01976 1156 Pfam Protein kinase domain 275 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01976 1156 Pfam Protein kinase domain 851 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01976 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Pste8g01976 1156 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 354 553 - -
Pste8g01976 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 975 987 IPR008271 GO:0004672|GO:0006468
Pste8g01976 1156 SUPERFAMILY Protein kinase-like (PK-like) 255 546 IPR011009 -
Pste8g01976 1156 Gene3D Phosphorylase Kinase; domain 1 808 930 - -
Pste8g01976 1156 Gene3D Phosphorylase Kinase; domain 1 236 353 - -
Pste8g01976 1156 SUPERFAMILY Protein kinase-like (PK-like) 835 1139 IPR011009 -
Pste8g01976 1156 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Pste8g01976 1156 SMART serkin_6 850 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01976 1156 SMART serkin_6 273 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01976 1156 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 172 565 - -
Pste8g01976 1156 CDD STKc_IRAK 856 1125 - -
Pste8g01976 1156 CDD STKc_IRAK 279 547 - -
Pste8g01976 1156 ProSiteProfiles Protein kinase domain profile. 273 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01976 1156 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 931 1131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01976 Pste-Chr8 15481880 15493113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01976 16 567 Receptor kinase-like Gene Family AT1G11050 47.700 3.83e-174 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pste8g01976 Pkinase 3.4e-41 CL0016