Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01973 GTCTTAACCATTTCTTCAGCAACAGCAACAACGACGCTCCGTTTTTTGTTTTTTCCTTTTCTGTTATAAACGTATTTGAAAACGCAGTGTCGTCGAAAGGATAAGGAGTTTCGAAATGTCGACGCAGAATCGTCGTTCCTCGCTTACTTCCTCGACGGCGTCGTCTTTGGCGAAACGACACCCGTCCGTGTCGTCGTCGGCGAAGGCGAAGGTCGTTTCGAAGAGAACGCCTCTCGCCAATGTCACAAACCAGAGGAACGCATCGTCTTCTTCTTTGGTGCCAAGTTCAATTAAATTAGCCAAAACTAAGAAAGAGGTCACTGCAAGAACCAGCGTCACAAAATCAACAATTGGTGGGAGCAAATTACCCGAGTTAAAAACTGTTAACTCAAGCTCAGCTGTTATTCCAAAGACTAATTCTTTACCAAGAAGGAATGATGCTGTTCCCACAGCTGCCACATTCGCCGTGTCGGTTCAGAGCAGCATTGATGTTTCTCCTAGTAAATCAGATGGAAGGCCCGTTTCTGTGGATGAAACAATGTCTACTTGTTATTCTATCAAGAGTCCTGAAGTTGAATATCTGGACAACAGGGATGTTTCAGCTGTTGATTCAATTCAGAAAATGGCAAGCAAGTTGAGCATTTCTGATACTACAGAGCCTGAAGGTAACATATATAGTACGGAAAAAAATGTTGAGTTAGAGAGAGAGAAGATTGCCAATATCGATAACATTTACTCTGATCCGCAGCTTTGTGCAACATATATTTGTGACATCTACGAGCACCTACGTAAATCAGAGGAAAAGAAAAGGCCTTCCACTGACTTCATGGAGAGAATTCAGAAGGACATCAATGTTAGCATGCGCGCTATATTGATTGACTGGCTTGTTGAGGTGGCTGAGGAGTATCGGCTTGTACCTGATACATTGTATTTGACAGTGAACTACATCGATCGGTATCTTTCAGGGAATGCTGTGAATAGACAAAGATTACAATTACTTGGTGTTTCCTGCATGATGATTTCCTCTAAATATGAGGAGATTTGTGCCCCTCAGGTGGAAGAATTTTGTTATATAACTGATAACACGTACTTAAAAGAAGAGGTTTTGAAAATGGAATCTGCTGTCTTGAATTATCTCAAGTTCGAAATGACAGCCCCAACAATTAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTGCTCATGATGTGGAGCTCCCTTCACTTCAACTGGAGTGCCTAACCAACTTCATCGCCGAATTATCTCTCTTGGAGTACAGTATGCTGTGTTATCGACCATCACTGATAGCTGCTGCTTCAATTTTCCTTGCCAGATTTATAGTTTTCCCTTCAAAGAAACCATGGAATTCCACATTGCAGCATTACACGCTCTACCAGCCTTCTGACCTGTGTGCATGTGTAAAAGATCTCCATCGTCTTTGTTGCAGCAGCCATGATTCTAATTTACCTGCAATCAGAGAGAAATACAGTCAGCATAAGTACAAATGTGTAGCCAAGAAGCATATCCCTCCTTCAATACCTCAAGAAGTTTTCCAGAATTGAGCAAAGGAGTTCATGTTTAAAGCCAATTATTAGATGCACAGGCCAAGTTTTGACAAAGCTTCAGTCTCTCAATGATGCAAGGACGATTTCAAGCTGAAATCATAGTTGGAACTTGGAACACATCTCATGTTGTGACACAGCTCAAACATGTGATATTAAACATCATGGAGATGTGCTGATGGAGATAGCAGCGTGAGATAGCATTAGAATTCCATGTGACAAATTCCCTCCTCTTGTTTCCACAAAGCACATCAAATGCGAATCATTCTTCTTCTTTTTCCTTTTTTGAAAATAAATGCTAATCATTCTAGGAATTAGAATATTATCTTTACTCGATTTTTAGTGTAAGCATTGCAGACATTTTTTTTCTTTTTTTTTCTATATTCAAAAGAGTCAAATGCGAATCATTCTTCTTCTTTTTCCTTTTTGAAAATAAATGCTAATCATTCTAGGAATTAGAATATTATCTTTACTCGATTTTTAGTGTAAGCATTGCAGACATTTTTTTTCTTTTTTTTTCTATATTCAAAAGAGTAATTAATG 2104 0.3931 MSTQNRRSSLTSSTASSLAKRHPSVSSSAKAKVVSKRTPLANVTNQRNASSSSLVPSSIKLAKTKKEVTARTSVTKSTIGGSKLPELKTVNSSSAVIPKTNSLPRRNDAVPTAATFAVSVQSSIDVSPSKSDGRPVSVDETMSTCYSIKSPEVEYLDNRDVSAVDSIQKMASKLSISDTTEPEGNIYSTEKNVELEREKIANIDNIYSDPQLCATYICDIYEHLRKSEEKKRPSTDFMERIQKDINVSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAVNRQRLQLLGVSCMMISSKYEEICAPQVEEFCYITDNTYLKEEVLKMESAVLNYLKFEMTAPTIKCFLRRFVRAAAHDVELPSLQLECLTNFIAELSLLEYSMLCYRPSLIAAASIFLARFIVFPSKKPWNSTLQHYTLYQPSDLCACVKDLHRLCCSSHDSNLPAIREKYSQHKYKCVAKKHIPPSIPQEVFQN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01973 481 CDD CYCLIN_AtCycA-like_rpt2 348 462 - -
Pste8g01973 481 FunFam Cyclin A1 335 467 - -
Pste8g01973 481 ProSitePatterns Cyclins signature. 250 281 IPR006671 -
Pste8g01973 481 Pfam Cyclin, C-terminal domain 348 467 IPR004367 -
Pste8g01973 481 Gene3D - 219 467 - -
Pste8g01973 481 SMART cyclin_7 255 339 IPR013763 -
Pste8g01973 481 SMART cyclin_7 352 440 IPR013763 -
Pste8g01973 481 MobiDBLite consensus disorder prediction 1 56 - -
Pste8g01973 481 Gene3D - 233 346 - -
Pste8g01973 481 PANTHER CYCLINS 168 465 IPR039361 -
Pste8g01973 481 Pfam Cyclin, N-terminal domain 219 345 IPR006671 -
Pste8g01973 481 SUPERFAMILY Cyclin-like 348 473 IPR036915 -
Pste8g01973 481 SUPERFAMILY Cyclin-like 208 345 IPR036915 -
Pste8g01973 481 PIRSF Cyclin_A_B_D_E 4 478 IPR046965 GO:0016538|GO:0044772
Pste8g01973 481 CDD CYCLIN_AtCycA_like_rpt1 209 344 - -
Pste8g01973 481 SMART Cyclin_C_2 348 471 IPR004367 -
Pste8g01973 481 FunFam Mitotic cyclin 6 233 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01973 Pste-Chr8 15417016 15421298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01973 4 481 Core Cell Cycle Gene Families AT1G44110 56.823 0.0 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01973 8 15417016 15421298 Pste8g01973 8 15417016 15421298 ECH
Pste8g01973 8 15417016 15421298 Pste2g03165 2 31598984 31602359 PCT