Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01964 GGAAAATATCCCCACTCCAGCGCAGTAAGGCGATCTATCTATACGCTATCTTTTGCTTCGCTTTCCTCCTCGCGTCGTTTTGTTCACCAAACGCACAAGAGCAATGTCGTCTGAGGACACCGAGAAAACGACGACGTCGAAGAAGAGCGCGTTCGACGCAGAAACGGCGTCGCTGCTCGTGAAGGAGCTGCGAGGAGCGTTCGGCTCCGGCAAAACGCGCAGTTACCAGTGGCGAGTGTCGCAGCTAAACGCGCTTATGAAACTTGTCGTCGATCGCGAGCAGGAGATCGTTGACGCGCTCCGAAACGACCTCGCGAAGCCGCCGCTCGAAACCGTCGCATACGAGATTGCTATGTTGAAAAACTCATGTAAAGTCGCCCTCAAGGAATTGAAACATTGGATGATTCCTGAAAAGGTCAAAACTTCAATCGCAACTTTTCCTTCTTCAGCTGAAATTGTATCTGAACCACTGGGGGTTGTGTTAGTCATTTCTGCATGGAACTACCCTTTCCTGTTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTTTTAAAACCATCAGAAATTTCTCCAGCCACATCATCACTGCTGGCAAAACTACTGGGAGACTACCTGGATATCTCATGTATTAGAGTTGTTGAGGGAGGAGTTGATGAAACATCCGCATTACTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGACGAGTGGCTCGCGTTGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTAGCAACAAGACGACTAATTGCAGGAAAGTGGGGTTGTAATAATGGACAAGCCTGCATTTCTCCAGATTACGTTATAACAACAAAAGACTGTGCTCCCAAGTTGGTGGATGCTCTAAAGACTGAATTGGAGAAATTTTATGGAAAGAATCCATTGGAATCAAAAGATTTGTCCCGTATTGTGAATTCCAATCACTTTAATCGCTTGACAAAGCTCTTGGACGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGAGAAAAGGATGAAAGTCTATTGAAGATTAGTCCCACTGTTCTATTGGATGTCCCACGGGATTCTTTGATTATGAGTGAGGAGATATTTGGTCCTTTACTTCCCATCCTCACGGTTGATAAAGTGGAAGAAAGTTTTGACGTGATCAATTCAGGACCAAAGCCTCTTGCAGCATATATATTTACATCTAACAAGAAGCTCAAGGAGCAATTTGTTACAAATATTTCAGCTGGCGGTGTGGTTGTCAATGACACCAGTTTACATCTTGCAGTTCATTCTTTGCCATTTGGAGGAGTTGGTGAGAGTGGAGTAGGTGCATACCACGGGAAATTCTCATTTGATGCTTTTAGTCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTTGGTGATGCAGCAATAAGGTACCCACCATACACAAATACAAAGATGAGATTGCTGAAAGCTCTCATTGGTGGTGGCATACTTGGTATTATTCGTGCTCTGTTTGGTTGGTCCTAGACTCCTAGGTATTAGTACAGTTCCCCCCAACTTTCCTTGTATTTTAATTTAATATTCAAAAGTGAGGAGTTGATTTCCAGAACATATTTTTCTTACTATATGTATATCCTACTTTAATGTGTAGCTGTGAAAAATTACTAAATGAATGGTCCTAGACTCCTAGGATCTTTTTTC 1702 0.4318 MSSEDTEKTTTSKKSAFDAETASLLVKELRGAFGSGKTRSYQWRVSQLNALMKLVVDREQEIVDALRNDLAKPPLETVAYEIAMLKNSCKVALKELKHWMIPEKVKTSIATFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEISPATSSLLAKLLGDYLDISCIRVVEGGVDETSALLQQKWDKIFYTGNGRVARVVMAAAAKHLTPVATRRLIAGKWGCNNGQACISPDYVITTKDCAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFNRLTKLLDDDKVSGKIVYGGEKDESLLKISPTVLLDVPRDSLIMSEEIFGPLLPILTVDKVEESFDVINSGPKPLAAYIFTSNKKLKEQFVTNISAGGVVVNDTSLHLAVHSLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFFGDAAIRYPPYTNTKMRLLKALIGGGILGIIRALFGWS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01964 474 PANTHER ALDEHYDE DEHYDROGENASE 225 461 IPR012394 GO:0006081
Pste8g01964 474 Pfam Aldehyde dehydrogenase family 236 431 IPR015590 GO:0016491
Pste8g01964 474 Pfam Aldehyde dehydrogenase family 9 226 IPR015590 GO:0016491
Pste8g01964 474 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 226 IPR016162 GO:0016491
Pste8g01964 474 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 412 429 IPR016162 GO:0016491
Pste8g01964 474 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 227 411 IPR016163 GO:0016620
Pste8g01964 474 SUPERFAMILY ALDH-like 25 448 IPR016161 GO:0016491
Pste8g01964 474 FunFam Aldehyde dehydrogenase 30 244 - -
Pste8g01964 474 FunFam Aldehyde dehydrogenase 213 411 - -
Pste8g01964 474 PIRSF ALDH 225 464 IPR012394 GO:0006081
Pste8g01964 474 PIRSF ALDH 4 226 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01964 Pste-Chr8 15188363 15196024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01964 82 472 Aldehyde Dehydrogenase Gene Family AT1G44170 71.290 0.0 623
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01964 8 15188363 15196024 Pste8g01964 8 15188363 15196024 ECH