Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01958 GAAAAACTTAAAAAAACAGACTATGGGAATCGGAGAGGGTATTATGGTAAAGTGGTAGAAGACGCTCCTTCGCTCATCGCTCTCACACTGCAATCTGTCTCCATCTGCATCAGTCCAAATCATAAATTTTGTTTTTCCATATCTAATCTCATTTCCCAATTCCATTCCACTTGGATCTGAAACTCATCACAACCCATCACCCAATCGATCTCAGTTCTTCTTATAACTCAGAAACTTCCATTATCGTAGCAAAGGAATCCAACCATGGCAGGCTTCAGTGGCGACGAAACCGCTCCTTTCTTCGGCTTCCTCGGTGCCGCCGCGGCCCTTGTCTTCTCCTTGTCGGAGCTTGCACCTAGTATTTCGAGTGATCCTAGATTTGATTCTCTTAAAGGGTTTCGGAATCGAGTGTTTGATCGTAGTATTTCGAGTATGGGAGCAGCGTATGGAACAGCGAAGAGTGGGGTGGGGGTGGCATCTATGGGTGTGATGAGGCCGGAGCTTGTGATGAAATCGATTGTGCCAGTGGTTATGGCTGGAGTGTTGGGGATTTATGGATTGATTATTGCGGTTATTATTAGCACTGGGATAAACCCTAAGGCTAAGTCTTACTATCTCTTTGATGGCTATGCTCACTTGTCCTCTGGCCTTGCCTGTGGTCTGGCTGGTCTTTCTGCTGGAATGGCCATTGGGATTGTTGGTGATGCTGGTGTCAGGGCTAATGCACAGCAACCGAAGCTGTTTGTTGGCATGATTCTTATCTTGATTTTTGCTGAAGCTCTAGCTCTCTATGGCCTCATTGTGGGCATCATCCTCTCATCTCGTGCTGGCCAATCTCGTGCTGAATAAAATGAACCAACTTTGGTGATTCTTGGTAGTCCAGAAAATTTTAATAGCAGGCTTGTATTTGAAATGGGAGATACTTGTCTTTAGTACATTAGTATTATTTTATTTGTTTCGTGCACAAAACCTGTATCCAAAGTCCATCAGTTTTATGAAGTATTTTCCTTTGGATGGCTGCATCATGATATGATACTTGTTTGTTGTGAGAAACACTGGAAACTATTGACACAATTAATAGAAGTTAAAACTATTGGCCACTCCCCTA 1108 0.435 MAGFSGDETAPFFGFLGAAAALVFSLSELAPSISSDPRFDSLKGFRNRVFDRSISSMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01958 194 Gene3D - 10 191 IPR035921 -
Pste8g01958 194 Pfam ATP synthase subunit C 54 105 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pste8g01958 194 Pfam ATP synthase subunit C 126 184 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pste8g01958 194 NCBIfam V-type ATPase subunit C 54 150 IPR011555 GO:0033179|GO:0046961|GO:1902600
Pste8g01958 194 PRINTS Vacuolar ATP synthase 16kDa subunit signature 163 186 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste8g01958 194 PRINTS Vacuolar ATP synthase 16kDa subunit signature 136 162 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste8g01958 194 PRINTS Vacuolar ATP synthase 16kDa subunit signature 85 109 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste8g01958 194 PRINTS Vacuolar ATP synthase 16kDa subunit signature 59 83 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste8g01958 194 FunFam V-type proton ATPase proteolipid subunit 40 191 - -
Pste8g01958 194 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 109 - -
Pste8g01958 194 CDD ATP-synt_Vo_c_ATP6C_rpt2 118 185 - -
Pste8g01958 194 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 190 - -
Pste8g01958 194 SUPERFAMILY F1F0 ATP synthase subunit C 116 185 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01958 Pste-Chr8 15116283 15119807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01958 1 194 Primary Pumps ATPases(2) AT2G16510 82.990 4.77e-103 292