Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01957 ACTAAACCCAATCATGGGACTTAATCAATGGCACATTTAGAAACCTGTCTGATTGTTTGTTTTTTTTTTTCCTTTTTCTTTTTCAAGTAAGATGCATTTAGACACAGTCCAACTCTGCTCCTTCTGTCTCTCTCCCCTTTCTTCTTCTTCTTCTTCGGTCTTCGCACTTTCCCAATAGCCACAACAGCCACTCTCCTCCGACATGTCCGATTCGAAGGTCGAAACAATCGCCAGATTAGCCCAATGGAGAATCGACAACTTCGGACCCTGCTCCTACAAAAAATCAGACCCTTTCAAGCTCGGAATTTGGAATTGAGGAACAGGTACCTCTACATACACATCTTTCCAGAACCTTCTCGGGTTTCTAAGGAACAGCCTCCTGTGGCACGCTTTATACTCAGAGTCTCCAACAACTCTGGCCCTTCCCGCAAATTTTACATTTCCCCTGTTCATGAAAGGGTGCTTAGGACAAGTGATGACTTTGTCTGGCCTGTTGACACTGCATTCCTTGGTCGCTTCGTTATTGATATTGAATTTCTTGACCTGAAGGCCTGCCCTGTGAATGGTGAAGCCAGATCTGTATGGCCATCTGATGGAAAACTGCAAACTGTTGCAGCTCAAAGCACTCTTCGATGCCTTTCTCGCATGCTTGATGAGGCTATACATGCTGACCTAACCATTATCACTGCAGATGGTACTCTGAGGGCTCACAAGGCAGTTTTATCTGCAAGTTCTACTGTGTTTCATGACTTGTATCTTCACAATGGGGATGAAAACAAGACATCTACTATCCACATAGAAGATATGTCTCAAGAATCCTGCATGGCTCTTCTCAATTACTTGTATGGCACTATAAAACAAGAAGATTTCTGGAAACACAGGCTTGCATTGCTTGGAGCAGCCAATAAATATGAGATTGGTGACCTCAAAGATGCTTGTGAAGAAAGCCTACTAGAAGATCTTAACTCAGAAAATGTTCTGGAGAGACTAAATGATGCATGGCTTTACCAGTTGCAGAAGTTAAAGAAAGGATGTTTCTCATTCTTATTTGATTTTGGTAAGATATATGATGTTAGAGACGAAATAAATACCTTTTTCCGACATGCAGATAGGCAGCTAATGGTGGAGATGTTTCAAGAAGTGCTTACATACGATATGGATAATGCCAATCTGCCCTCTTCAACAACCTGGCAGTTAAAACGTGAAGGGACTAGTGCAGTTGAAGGAATTTGGTTAGATATGACTCAAACTACGAATATAAATTTAAGCTCTAAAGCATTCAGAAAGATGCCAAACTTGAGATTACTTACTTTCCAATCTCCTAACGAAGACACTGGGATAACTAATTCAGTGCTCCTTCCCAATGGTCTTCAATTCTTACCTAAAAACTTAAGATATTTGGGGTGGAATGGATATCCACTAGATTCTCTACCATCAAGTTTTTGCCCTGAGAAGCTTGTTGAGCTTTCCATGCCATTCAGCAATGTGGAAAGACTCTGGCATGGAGTACAAAATTTTCCAAATTTAGAGAGAATTGAACTTCGAGGCTCCAAGAATCTCATTGAGTGTCCAAAGTTGGCTCACGCACCAAATCTTAGATATGTCAGTATGCGTGATTGTGAAAGTTTGTCTTATGTTGATCCATCAATTTTCTTCCTCCTAAAACTTGAAATCTTGAATGTGGCCGGATGCAAATCGCTTAGGAGCCTTAACAGCAACAGTTGGCCGCAATCTCTTAAAGTATTATTTTTAGCACATTCAGGTGTGAATGAACTGCCCCCATCAATTTTGAATATCAGAAATCTTCATATTGCCATCATTAGTTTGCCCGAAAGCTTTAAGTATCTTCCAAGACTGAAACTTCTTGAAATTGGCAAATGTAAAATGCTTCAACATGTACCTGCACTTCCACCATCCATTCAATTGTTTTATGTTTGGAACTGCCAATCTCTTCAAACAGTATTAAGTTCAACAGTTGAATCATCCAAAAAGCCCAATTGTACTTTTCTGGTTCCTAACTACATAAAATTGGATGAGCATTCATATGATGCAATTTTTGTTAGGATTGAACTTGGAACAAAACCATCATCAGCAGTAGTATCGGAAAATGAAGAAGAGGCATCCTTGGACAATGAGGGTGGTGATTTTTATTTTTTTCAATTAGCAAGACATGATAAGATTTGTTACTGTTTGTCAGCTAGAAGGGGCAAAGTTCAAAAGTGGTTCCATAGCCACTATACACAAGCTGTTGTCACTGTTGAACTTCCCCGTAATGTGAAATGCTACTTGGAAACCAGTCAAGATGAGAAGATCAAAATACCAAAAAGAGGATGTAAGTCCAACAGGAAAAGCAGGGAAATTTATGAAGTAAAAGCCGATGTTGTTGGAAATCAAGTTGGGGACTCTGAGCCTAATGAGGAAGAAACTTTTCTTCCAACAAAAAAATTTAGGCAAGTGTCCGCAGAAGTCAGATTTGTATGGCTATCTGCTGGAAAACTGCAAACTATTGCAGCTCAAAGAACTATTTACTCAGTACCGGTTTCGGATGGTATTCTGAGAGTACAGAAGTCAGTTTTATCTGCACGTTCTACCATGTTCTATGATTTGTATCTATTTTCACAA 2622 0.3982 MENRQLRTLLLQKIRPFQARNLELRNRYLYIHIFPEPSRVSKEQPPVARFILRVSNNSGPSRKFYISPVHERVLRTSDDFVWPVDTAFLGRFVIDIEFLDLKACPVNGEARSVWPSDGKLQTVAAQSTLRCLSRMLDEAIHADLTIITADGTLRAHKAVLSASSTVFHDLYLHNGDENKTSTIHIEDMSQESCMALLNYLYGTIKQEDFWKHRLALLGAANKYEIGDLKDACEESLLEDLNSENVLERLNDAWLYQLQKLKKGCFSFLFDFGKIYDVRDEINTFFRHADRQLMVEMFQEVLTYDMDNANLPSSTTWQLKREGTSAVEGIWLDMTQTTNINLSSKAFRKMPNLRLLTFQSPNEDTGITNSVLLPNGLQFLPKNLRYLGWNGYPLDSLPSSFCPEKLVELSMPFSNVERLWHGVQNFPNLERIELRGSKNLIECPKLAHAPNLRYVSMRDCESLSYVDPSIFFLLKLEILNVAGCKSLRSLNSNSWPQSLKVLFLAHSGVNELPPSILNIRNLHIAIISLPESFKYLPRLKLLEIGKCKMLQHVPALPPSIQLFYVWNCQSLQTVLSSTVESSKKPNCTFLVPNYIKLDEHSYDAIFVRIELGTKPSSAVVSENEEEASLDNEGGDFYFFQLARHDKICYCLSARRGKVQKWFHSHYTQAVVTVELPRNVKCYLETSQDEKIKIPKRGCKSNRKSREIYEVKADVVGNQVGDSEPNEEETFLPTKKFRQVSAEVRFVWLSAGKLQTIAAQRTIYSVPVSDGILRVQKSVLSARSTMFYDLYLFSQ 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01957 793 Gene3D Ribonuclease Inhibitor 494 592 IPR032675 -
Pste8g01957 793 Gene3D Ribonuclease Inhibitor 304 493 IPR032675 -
Pste8g01957 793 CDD BTB_POZ_ZBTB_KLHL-like 141 223 - -
Pste8g01957 793 Gene3D Potassium Channel Kv1.1; Chain A 116 269 IPR011333 -
Pste8g01957 793 ProSiteProfiles BTB domain profile. 142 201 IPR000210 GO:0005515
Pste8g01957 793 Pfam Leucine Rich Repeat 404 423 IPR011713 -
Pste8g01957 793 Pfam BTB/POZ domain 135 238 IPR000210 GO:0005515
Pste8g01957 793 SMART BTB_4 142 240 IPR000210 GO:0005515
Pste8g01957 793 PANTHER OS08G0495500 PROTEIN-RELATED 25 302 IPR044714 -
Pste8g01957 793 SUPERFAMILY L domain-like 330 590 - -
Pste8g01957 793 SUPERFAMILY POZ domain 125 238 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01957 Pste-Chr8 15098889 15110219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01957 322 554 WRKY Transcription Factor Family AT4G12020 35.918 5.46e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste8g01957 BTB 5.3e-20 CL0033