Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01940 AAATTATTAAAAAAGTGAGAAAAAACATATTAACTCAATATTTTAACGAAAAAATTTTATTTTATTTTTTTTATCTATAATTTTAAATAACAAATATCTAGGATCTTGACCATCTATAACTTAACACAGGAGAATCTAAATTAATTAATAATTCTTTACCAATATTTAATAATTATAATTAATTATTTATGTTTCACGCATTACTAAGCACTGTTACATTACTGAATGCAAATCCCAAATTCAAAAACCCTCTTTCATTTTCAACAACTCGGAACCATGGATTCCTGCAATTTGACTCTCACCACGCCCAAGCCCAAAAATGCTGAAGCAAGCAACGATCCCAGTTCTCCTGCTGTAGACAACATTAGAAAGAGGAAATCTCCTGCAACAAAACTCACTCCAAGAAAAAGAGCTTCAAAGAGTAATACGCCTAAGAAAAATAGCACGCCAAAGAAGAATGGATCAGTCGTTGCTTCCTGTGTTTTGACTCAGAAGATTGATTTGTGGCGGGAAGCTAAATTGTCAGCCGAGGAGGATGCTAGGATGTATGCAGGACGAAAAATACATCCTTTCTTTTCATTGTGGAAGGTAGAGAGGGAAAAACAGTTGCAGGATCGTGTTGATAAGAGGAAGGGAGAAAAAATTACATGTGGTCCTATTCATGTATTTGAAAATGTTGAGGATGACGCCTCACTATGTGATTGGAGTAATTGGACATTTTTGGATAAGATGACAACCTGTGCAGATTCTGGTACAGAAAGTTCAGATTTTATGGAGAATTCTGTTGAATCCTTGAATTTTGATCATATATGTCCATCAGAACCTGAAGATACCAAAGAGGATCTTAACTTGGAGGTGAATGAAAATATGTTTTCTTCAAGACATACAGGTATCTTGAGAAAGTCTGACTCTGAGCCACAGAGTAAATTTCTTCAAGAAAGTATGAGGTCTTATTATCAAAGCTGTGAAACTAAGGCCGAGAGCATCTTATGGATACACAAGTACAAGCCAACAAAGGCCTTTGAGGTGTGTGGTAACGAAGAGGCTATAAATCTTCTGTGTAACTGGTTACATCTTTGGCACGAAAAACATTATCAATGCAGAAGAGATACTTCAGAAGATATCAACGAGGAGGAGGATTCCCTGCACAAAGTTCTTTACATTACAGGACCAACTGGGAGTGGCAAGTCTGCAGCTGTTTATGCTTGTGCCCAAGAACAAGGGTTTGAGGTTTTAGAGATCAATGCATCAAATTGTCGAAACGGGGCTGCCATCAAGGAGAATTATGAATCAGCTCTTGAAGCACATCAATTCAAAAGGCTATTGGATCATCCTAAGAGTTCACATAAGAAAACTGATAAGTTGCTTAAAGCTCCAGCTTTGCCTAATGGTATAGCAGCTGAGGAGATGGATGATGGAGTGACAGAATTGATAGTCATTTCCGATCATGAAGCCCATAATCTTGGTGGAACATCTCCAAGAGTACATGGCAAAAGTAATAGAGTGCCAATTTTAATTCTAGTTGAGGATTTGGACATCCTTATGCTTGAAGATCGTGGACATATCACTGCCATAAGACACATCTCTCAGACATCAAAAAGGCCAATTATATTGACCAGCAATAGTAAAAATGGTGGCCTACCAGATAAATTTCCAAGACTACATGTTTCTTTTTCATTGCCATTGCCAGATGAGTTACTTTGCCATACATACATGATTTGTGTCACGGAAGAAGTCGACATCAATCCTATTTTATTGAAAAAATTTATCCAATCTTGTGATGGAGATATTCGCAAAACCATTATGCAACTTCAGTTCTGGTTCCAGAATAAAAAATATAGAAAAGATAGGAGAGTGCAGAAGGTGTATGGCTTGCTTCCTTTTGATCTTGAGGCTTGTCACCAGATAATGCCAAAGATACTACCTTGGAGTTATCCCTCAGAGTTATCCAAACTAATTGAGAAGGAAGTTGCCAAGTCAATAACAATATTGGAGGAAAACTTATGGATTCAGGGGTTAGTTAATAAAAAAGTATACATTAATGAAAGAAAAAATGATTTAGATGTGCAGTCTATGATGTCTGATTTTTTAGAGTCTAAGGTAGACGGCATCAAGGGATCTCTTACAGACTGCAGTGAGTTTGAAAAACATAGTGCTATTTATAAACTTTCAAATTGTTCTGGATCCCTCGTAACATCTTCTTGGCAAAAGGATTCAAGTAAATTTACATTGATGTCTTCCATGGAGAAGGATTCAAATAATCATTCTCTCCTCATCCCTGAAGAAGTTTACAAAAGACAATCCTTTGAAAGGAATGGCCAATATCTCTGCAAGTTTCAACCTAATCAAACCTACTCCACGACACATAAATCATTTGATTTATCCTGTTCTCTGGGATCAATGTCTGGACCAGCGCCTTCTCACTGTCATGCTAGTCTTTCTCACTGTCATGCTAGTCCTTCTCACTGTCATGCTAGTCCTTCTCACTGTCATGCTAGTCCAGTACAAGTCTCTCTGAATAATGAGCTTACATCAATCACTTTCGATGTTTGTCAGTCCTTAGATTTAGAGAAATTGCCACAAAACTCTGATTCATTGACAAATCCTGGAATTTCGGAACATTCTTCAAGAGCAACTGTGCAAAATATCAGAGTTTGGAACACAGAAACCACAACTATGTCTAATGTGATAGATGAGTGCAGTCAAACTGATTTTAAATTGAAGTCTAACTTGGTTGAGTCCAGTCCATCGAAGGTGATGGATGTGGTACAAAATTTTTGGAAGAAACTTCGTATTTGTCAAAAGGACTTAGGACAACATACCAACCCAGAACAGTTGGGTGTTATGCAAGTAGTTACACTTACTAGTGAGCTGACCAATCTAATGTCTGAAGCTGACTTACTATTTCATAATCACCAACCAAAACATTGTGGTATCATGGAGCCTACCATGCTCCTTTCTGATGAAGCCATGTTTAGCTGGTATGATGAGCAAACTATGATGTCTACTTTTGCTGTGCATGGATTTTGTTTTTATGCCAAACGTATATCAGATGTGGGATCCAAGTTTGGGCATGAGAATGAGGTAGATCTTACTTCGGAGATTTTGGCTTGCACTAATAATGTTATGGCACTGGGAAAATTGTCTAGACAGAACCAAACAAAAATCCAAAGTATCCACCCAAAAAAACAATTAGAGGTGAACAATCCAACAAATGATACAAAGAGAACATCTTTGTCCAATGCCATCCGGTCCATTGTTCCTACGAGATCTTTATTGGCAATGAAAGGTCTTGCATTCAATGAATATATATCTTCACTGCGTCATATCTCAACTTTGGAAGGTTTCCGAATTTCAAATGGTTCTGAAAAGATGAGAAAACGAAGGCGGGTTGCTCCACATTATTTGAGTCGAGGTAGAATGTCGTTGTCTCCCGAACATATTTCATTGGTATGTGAAGGTGATTTATACACAAAGATTTCTTCCCAATACATTGCTAGCATGGAAAGCAAGATTTAATGTGTGGAAATAAAAGGGATGGTGATTGGCATTATAAGTTTATTTTCACACATGATTATGGTCATTGGCTGAGATTGTAAAATAGATTGAAGCGGCATTAGAGATTAGCACAGGAGTTAGCAATTGTAACCGTAGACATGTTATGCTCTTTAGCAATTGTAACTGTAGACATGTTATGCTCTTTAAATAACTTTG 3714 0.3721 MQIPNSKTLFHFQQLGTMDSCNLTLTTPKPKNAEASNDPSSPAVDNIRKRKSPATKLTPRKRASKSNTPKKNSTPKKNGSVVASCVLTQKIDLWREAKLSAEEDARMYAGRKIHPFFSLWKVEREKQLQDRVDKRKGEKITCGPIHVFENVEDDASLCDWSNWTFLDKMTTCADSGTESSDFMENSVESLNFDHICPSEPEDTKEDLNLEVNENMFSSRHTGILRKSDSEPQSKFLQESMRSYYQSCETKAESILWIHKYKPTKAFEVCGNEEAINLLCNWLHLWHEKHYQCRRDTSEDINEEEDSLHKVLYITGPTGSGKSAAVYACAQEQGFEVLEINASNCRNGAAIKENYESALEAHQFKRLLDHPKSSHKKTDKLLKAPALPNGIAAEEMDDGVTELIVISDHEAHNLGGTSPRVHGKSNRVPILILVEDLDILMLEDRGHITAIRHISQTSKRPIILTSNSKNGGLPDKFPRLHVSFSLPLPDELLCHTYMICVTEEVDINPILLKKFIQSCDGDIRKTIMQLQFWFQNKKYRKDRRVQKVYGLLPFDLEACHQIMPKILPWSYPSELSKLIEKEVAKSITILEENLWIQGLVNKKVYINERKNDLDVQSMMSDFLESKVDGIKGSLTDCSEFEKHSAIYKLSNCSGSLVTSSWQKDSSKFTLMSSMEKDSNNHSLLIPEEVYKRQSFERNGQYLCKFQPNQTYSTTHKSFDLSCSLGSMSGPAPSHCHASLSHCHASPSHCHASPSHCHASPVQVSLNNELTSITFDVCQSLDLEKLPQNSDSLTNPGISEHSSRATVQNIRVWNTETTTMSNVIDECSQTDFKLKSNLVESSPSKVMDVVQNFWKKLRICQKDLGQHTNPEQLGVMQVVTLTSELTNLMSEADLLFHNHQPKHCGIMEPTMLLSDEAMFSWYDEQTMMSTFAVHGFCFYAKRISDVGSKFGHENEVDLTSEILACTNNVMALGKLSRQNQTKIQSIHPKKQLEVNNPTNDTKRTSLSNAIRSIVPTRSLLAMKGLAFNEYISSLRHISTLEGFRISNGSEKMRKRRRVAPHYLSRGRMSLSPEHISLVCEGDLYTKISSQYIASMESKI 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01940 1097 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 29 1087 IPR004582 GO:0006281
Pste8g01940 1097 Gene3D - 254 476 IPR027417 -
Pste8g01940 1097 Gene3D - 494 548 - -
Pste8g01940 1097 SMART AAA_5 307 491 IPR003593 GO:0016887
Pste8g01940 1097 MobiDBLite consensus disorder prediction 53 67 - -
Pste8g01940 1097 MobiDBLite consensus disorder prediction 23 43 - -
Pste8g01940 1097 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 488 549 - -
Pste8g01940 1097 MobiDBLite consensus disorder prediction 23 79 - -
Pste8g01940 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 548 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01940 Pste-Chr8 14777298 14785856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01940 253 348 Core DNA Replication Machinery Family AT5G22010 30.208 4.84e-09 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01940 8 14777298 14785856 Pste8g01940 8 14777298 14785856 ECH